Carg08363 (gene) Silver-seed gourd

NameCarg08363
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_015 : 1134374 .. 1135823 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAAAACTGAACAAACAGAATCAGAAGCAGAAACTGAGTGATCAATGGACTGATGATGACGTTAAACTGGAGAAGAGGAGAAAAGAGAGGAAGAATCAAGGGAGGGTGCTGAGAGAAGTAATAATGAAACATCATTTTAGAATTGATACATCACATTTCTTTTCTTAGTTAACGAAGAAACATTTCACTCGGTGACATAGTGTTACTTTCTGGAATTTGGGTACTAAATAGATACTGAAGTATGTTTTGCTTTTTTTTTTTTTCTTTTTATTCCTTGTTAAAAATATTAATGTCTACTTCTCTCTTGTCGGCTAAAGTTAGATTCTCAGTTCTTTATTCTTTATTATTCTACTGGTTTCATTGATTTTCGTGTGCTTCTTTTGTTCTCTGTTGATCCAACGAAATGTTAAATATCTAGATTGGTGACTTGGAATCAGCCATTTCTTCGAAAATGGCGGTTTCTTGTTGCTGGGTATTTCATGCACTACAAAAGGATATCACACATTCCTAGACTATGCTTGCATGGGTTGTGGTAATAGAGCTTTAAGTGACCTTTTTAACTTCTGATTCTCATATTGAATATCCTAGTAACGTTTGCTTGAAGCTGTTTGTTCTCTCTTTCGAATCTATTGCTATTTTTTATGTGGGATGATTGAAACACTTATAAGCGATATCTTGTAGTTTCAACTATGAAATCTGGTTAGTTTTGTTTGTGGTGGTAGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAATGCAGCAATGCTGCATGCTTGTATGTCTGGCTGTCTCTCTTGACTAGAATTTAGTAGCTGGAACTTGGGTTTGTGGTGTCCCTTTTGTGCAGACTTGCGCTTTGATATGCTGTTTTCTGCCGTAGAAAATAAGATGGAAGAGAGAGGCTTTTGTTGTTTTTTGGTGTTTGTAATGCTCTGATAGGTTTAGAGAGTTGAATTGAATTTCAGGTACGTTGATCATCTGTTTGAATATTAGTGTCAAAACTAATCGTCTTTTTTAAGGGT

mRNA sequence

ATGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAATGCAGCAATGCTGCATGCTTGTATGTCTGGCTGTCTCTCTTGACTAGAATTTAGTAGCTGGAACTTGGGTTTGTGGTGTCCCTTTTGTGCAGACTTGCGCTTTGATATGCTGTTTTCTGCCGTAGAAAATAAGATGGAAGAGAGAGGCTTTTGTTGTTTTTTGGTGTTTGTAATGCTCTGATAGGTTTAGAGAGTTGAATTGAATTTCAGGTACGTTGATCATCTGTTTGAATATTAGTGTCAAAACTAATCGTCTTTTTTAAGGGT

Coding sequence (CDS)

ATGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAA

Protein sequence

MKNAAMSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERFRRVDFGSGGSSSNSIRGSAGSKGGK
BLAST of Carg08363 vs. NCBI nr
Match: XP_022929740.1 (uncharacterized protein LOC111436237 [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 2.9e-69
Identity = 140/143 (97.90%), Postives = 140/143 (97.90%), Query Frame = 0

Query: 6   MSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRT 65
           MSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRT
Sbjct: 1   MSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRT 60

Query: 66  HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQE 125
           HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQE
Sbjct: 61  HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQE 120

Query: 126 RFRRVDFGSGGSSSNSIRGSAGS 149
           RFRRVDFGSGGSSSNSIR   GS
Sbjct: 121 RFRRVDFGSGGSSSNSIRVEFGS 143

BLAST of Carg08363 vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 0

Query: 6   MSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRT 65
           MSGKQLDQWG+GYQSYD DLDDYSYSPP QGNVQVAR+GYVGVVSAE KQVSSYEQSWRT
Sbjct: 1   MSGKQLDQWGSGYQSYDYDLDDYSYSPPSQGNVQVARMGYVGVVSAEDKQVSSYEQSWRT 60

Query: 66  HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQE 125
           HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQ QE
Sbjct: 61  HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQHQE 120

Query: 126 RFRRVDFGSGGSSSNSIRGSAGSKGGK 153
           RFRRVDFGSG  SS+SIRGSAGSKGGK
Sbjct: 121 RFRRVDFGSG--SSSSIRGSAGSKGGK 145

BLAST of Carg08363 vs. NCBI nr
Match: XP_022157391.1 (uncharacterized protein LOC111024099 [Momordica charantia])

HSP 1 Score: 156.0 bits (393), Expect = 1.0e-34
Identity = 95/147 (64.63%), Postives = 102/147 (69.39%), Query Frame = 0

Query: 6   MSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRT 65
           MSGKQLDQW +G Q Y             QG     R GY  VV  E  Q S YE+SWR 
Sbjct: 1   MSGKQLDQW-SGDQDYXXXXXXXXXXXXSQGYEIQPRCGY-AVVVQEDNQASRYEKSWRC 60

Query: 66  HDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQE 125
           HDR+RQTG+Y TASTKEVASRGETFKERS+GRVG KDEFKTTST RVGDRSGYTEYQRQE
Sbjct: 61  HDRDRQTGNYKTASTKEVASRGETFKERSTGRVGYKDEFKTTSTCRVGDRSGYTEYQRQE 120

Query: 126 RFRRVDFGSGGSSSNSIRGSAGSKGGK 153
            +RRVDFGS GS         GSKGG+
Sbjct: 121 TYRRVDFGSSGS---------GSKGGQ 136

BLAST of Carg08363 vs. NCBI nr
Match: XP_008452151.1 (PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 6.2e-32
Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0

Query: 9   KQLDQWGNGYQSYDDDL-DDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHD 68
           KQ+ ++  GYQ+YD D  DDYSY+   QG    A IGY+ VV  +  Q+SSYEQSWRTHD
Sbjct: 3   KQVGRYDGGYQNYDYDYSDDYSYN---QGPEVQATIGYLEVVE-DNNQMSSYEQSWRTHD 62

Query: 69  RNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERF 128
           RNRQTGSYTT STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QERF
Sbjct: 63  RNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERF 122

Query: 129 RRVDFGSGGSSSNSIRGSAGSKGGK 153
           RRVDF  GGSSS S  GS G KG K
Sbjct: 123 RRVDF--GGSSSGS--GSKGGKGNK 139

BLAST of Carg08363 vs. NCBI nr
Match: KGN61102.1 (hypothetical protein Csa_2G049910 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 5.1e-26
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0

Query: 9   KQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHDR 68
           KQ+  +  GYQ+YD   +DYSY+   QG    A IGY+ V+  E  Q+SSYEQSWRTHDR
Sbjct: 3   KQVGHYDGGYQNYDYS-NDYSYN---QGQEVQATIGYIEVI--EDNQMSSYEQSWRTHDR 62

Query: 69  NRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERFR 128
           NRQTGS TT+STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QER R
Sbjct: 63  NRQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERLR 118

Query: 129 RV 131
           R+
Sbjct: 123 RI 118

BLAST of Carg08363 vs. TrEMBL
Match: tr|A0A1S3BT44|A0A1S3BT44_CUCME (uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32
Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0

Query: 9   KQLDQWGNGYQSYDDDL-DDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHD 68
           KQ+ ++  GYQ+YD D  DDYSY+   QG    A IGY+ VV  +  Q+SSYEQSWRTHD
Sbjct: 3   KQVGRYDGGYQNYDYDYSDDYSYN---QGPEVQATIGYLEVVE-DNNQMSSYEQSWRTHD 62

Query: 69  RNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERF 128
           RNRQTGSYTT STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QERF
Sbjct: 63  RNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERF 122

Query: 129 RRVDFGSGGSSSNSIRGSAGSKGGK 153
           RRVDF  GGSSS S  GS G KG K
Sbjct: 123 RRVDF--GGSSSGS--GSKGGKGNK 139

BLAST of Carg08363 vs. TrEMBL
Match: tr|A0A0A0LK69|A0A0A0LK69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0

Query: 9   KQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHDR 68
           KQ+  +  GYQ+YD   +DYSY+   QG    A IGY+ V+  E  Q+SSYEQSWRTHDR
Sbjct: 3   KQVGHYDGGYQNYDYS-NDYSYN---QGQEVQATIGYIEVI--EDNQMSSYEQSWRTHDR 62

Query: 69  NRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERFR 128
           NRQTGS TT+STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QER R
Sbjct: 63  NRQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERLR 118

Query: 129 RV 131
           R+
Sbjct: 123 RI 118

BLAST of Carg08363 vs. TrEMBL
Match: tr|A0A061GQI1|A0A061GQI1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038892 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-18
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 55  QVSSYEQSWRTHDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGD 114
           Q S  + + +T   ++QTGSYT A+ KEV S GETFKERS+GRVG KDE+KTTSTY+VGD
Sbjct: 38  QSSCNQTTSKTSYVDKQTGSYTRATNKEVVSTGETFKERSTGRVGYKDEYKTTSTYKVGD 97

Query: 115 RSGYTEYQRQERFRRVDFGSGGSSSNSIRGSAG 148
           +SGYTEYQ +ERFR V + SG SSSN    S G
Sbjct: 98  KSGYTEYQVEERFRNVKY-SGNSSSNKGNNSGG 129

BLAST of Carg08363 vs. TrEMBL
Match: tr|A0A1R3J9H2|A0A1R3J9H2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07098 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17
Identity = 53/98 (54.08%), Postives = 74/98 (75.51%), Query Frame = 0

Query: 54  KQVSSYEQSWRTHDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVG 113
           +Q   Y+++ +T+  ++QTG Y   + K+V S GETFKERS+GRVG KDE+KTTSTYR+G
Sbjct: 101 QQSGLYQRTSKTNSMDKQTGKYARVTNKDVFSGGETFKERSTGRVGFKDEYKTTSTYRLG 160

Query: 114 DRSGYTEYQRQERFRRVDFGSGGSSSNSIRGSAGSKGG 152
           D+SGY EYQ +ERFR ++FG  GSS+N    ++G+ GG
Sbjct: 161 DKSGYCEYQIEERFRMINFGGSGSSNN----NSGNYGG 194

BLAST of Carg08363 vs. TrEMBL
Match: tr|A0A067L5T5|A0A067L5T5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23029 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14
Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 0

Query: 44  GYVGVVSAEVKQVSSYEQSWRTHDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDE 103
           G    ++ + +Q +S +   R    ++QTGSY   + K+  S G+ FKERS+GRVG KDE
Sbjct: 29  GSYNAMATKGQQSNSQQWISRNSIVDKQTGSYAKTTVKQSYSSGDVFKERSTGRVGHKDE 88

Query: 104 FKTTSTYRVGDRSGYTEYQRQERFRRVDFGSGGSSS 140
            KTTST++VGD+SGY EYQ +ERFR+VD+G+  SS+
Sbjct: 89  LKTTSTFKVGDKSGYYEYQVEERFRKVDYGNSSSSN 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022929740.12.9e-6997.90uncharacterized protein LOC111436237 [Cucurbita moschata][more]
XP_022997473.12.3e-6693.88uncharacterized protein LOC111492379 [Cucurbita maxima][more]
XP_022157391.11.0e-3464.63uncharacterized protein LOC111024099 [Momordica charantia][more]
XP_008452151.16.2e-3264.14PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo][more]
KGN61102.15.1e-2660.66hypothetical protein Csa_2G049910 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BT44|A0A1S3BT44_CUCME4.1e-3264.14uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=... [more]
tr|A0A0A0LK69|A0A0A0LK69_CUCSA3.4e-2660.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1[more]
tr|A0A061GQI1|A0A061GQI1_THECC4.4e-1862.37Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038892 PE=4 SV=1[more]
tr|A0A1R3J9H2|A0A1R3J9H2_COCAP1.7e-1754.08Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07098 PE=4 ... [more]
tr|A0A067L5T5|A0A067L5T5_JATCU3.9e-1448.96Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23029 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08363-RACarg08363-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..100

The following gene(s) are paralogous to this gene:

None