Carg08363-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAAAACTGAACAAACAGAATCAGAAGCAGAAACTGAGTGATCAATGGACTGATGATGACGTTAAACTGGAGAAGAGGAGAAAAGAGAGGAAGAATCAAGGGAGGGTGCTGAGAGAAGTAATAATGAAACATCATTTTAGAATTGATACATCACATTTCTTTTCTTAGTTAACGAAGAAACATTTCACTCGGTGACATAGTGTTACTTTCTGGAATTTGGGTACTAAATAGATACTGAAGTATGTTTTGCTTTTTTTTTTTTTCTTTTTATTCCTTGTTAAAAATATTAATGTCTACTTCTCTCTTGTCGGCTAAAGTTAGATTCTCAGTTCTTTATTCTTTATTATTCTACTGGTTTCATTGATTTTCGTGTGCTTCTTTTGTTCTCTGTTGATCCAACGAAATGTTAAATATCTAGATTGGTGACTTGGAATCAGCCATTTCTTCGAAAATGGCGGTTTCTTGTTGCTGGGTATTTCATGCACTACAAAAGGATATCACACATTCCTAGACTATGCTTGCATGGGTTGTGGTAATAGAGCTTTAAGTGACCTTTTTAACTTCTGATTCTCATATTGAATATCCTAGTAACGTTTGCTTGAAGCTGTTTGTTCTCTCTTTCGAATCTATTGCTATTTTTTATGTGGGATGATTGAAACACTTATAAGCGATATCTTGTAGTTTCAACTATGAAATCTGGTTAGTTTTGTTTGTGGTGGTAGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAATGCAGCAATGCTGCATGCTTGTATGTCTGGCTGTCTCTCTTGACTAGAATTTAGTAGCTGGAACTTGGGTTTGTGGTGTCCCTTTTGTGCAGACTTGCGCTTTGATATGCTGTTTTCTGCCGTAGAAAATAAGATGGAAGAGAGAGGCTTTTGTTGTTTTTTGGTGTTTGTAATGCTCTGATAGGTTTAGAGAGTTGAATTGAATTTCAGGTACGTTGATCATCTGTTTGAATATTAGTGTCAAAACTAATCGTCTTTTTTAAGGGT ATGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAATGCAGCAATGCTGCATGCTTGTATGTCTGGCTGTCTCTCTTGACTAGAATTTAGTAGCTGGAACTTGGGTTTGTGGTGTCCCTTTTGTGCAGACTTGCGCTTTGATATGCTGTTTTCTGCCGTAGAAAATAAGATGGAAGAGAGAGGCTTTTGTTGTTTTTTGGTGTTTGTAATGCTCTGATAGGTTTAGAGAGTTGAATTGAATTTCAGGTACGTTGATCATCTGTTTGAATATTAGTGTCAAAACTAATCGTCTTTTTTAAGGGT ATGAAAAACGCAGCTATGTCAGGAAAGCAGCTAGATCAATGGGGGAATGGGTACCAAAGTTACGACGATGATTTGGACGACTACTCGTACAGTCCTCCATTGCAAGGGAATGTACAAGTGGCAAGAATAGGATATGTGGGTGTTGTTAGTGCAGAAGTCAAACAAGTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGCAACAGGCAAACTGGAAGCTATACGACCGCTTCAACAAAGGAGGTTGCTTCTCGTGGTGAAACATTCAAGGAGAGGTCAAGTGGGAGAGTTGGGTCGAAGGATGAGTTCAAAACCACCTCCACTTACAGGGTTGGTGACCGAAGTGGATATACCGAGTATCAGCGTCAAGAGAGGTTCCGGCGTGTTGATTTTGGCAGCGGCGGCAGCAGCAGCAACAGCATAAGAGGATCAGCGGGTAGTAAGGGGGGTAAGTAA MKNAAMSGKQLDQWGNGYQSYDDDLDDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHDRNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERFRRVDFGSGGSSSNSIRGSAGSKGGK
BLAST of Carg08363-RA vs. NCBI nr
Match: XP_022929740.1 (uncharacterized protein LOC111436237 [Cucurbita moschata]) HSP 1 Score: 270.8 bits (691), Expect = 2.9e-69 Identity = 140/143 (97.90%), Postives = 140/143 (97.90%), Query Frame = 0
BLAST of Carg08363-RA vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima]) HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66 Identity = 138/147 (93.88%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of Carg08363-RA vs. NCBI nr
Match: XP_022157391.1 (uncharacterized protein LOC111024099 [Momordica charantia]) HSP 1 Score: 156.0 bits (393), Expect = 1.0e-34 Identity = 95/147 (64.63%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Carg08363-RA vs. NCBI nr
Match: XP_008452151.1 (PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo]) HSP 1 Score: 146.7 bits (369), Expect = 6.2e-32 Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0
BLAST of Carg08363-RA vs. NCBI nr
Match: KGN61102.1 (hypothetical protein Csa_2G049910 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 5.1e-26 Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of Carg08363-RA vs. TrEMBL
Match: tr|A0A1S3BT44|A0A1S3BT44_CUCME (uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32 Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0
BLAST of Carg08363-RA vs. TrEMBL
Match: tr|A0A0A0LK69|A0A0A0LK69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26 Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of Carg08363-RA vs. TrEMBL
Match: tr|A0A061GQI1|A0A061GQI1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038892 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.4e-18 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Carg08363-RA vs. TrEMBL
Match: tr|A0A1R3J9H2|A0A1R3J9H2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07098 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17 Identity = 53/98 (54.08%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Carg08363-RA vs. TrEMBL
Match: tr|A0A067L5T5|A0A067L5T5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23029 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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