MELO3C004079.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004079.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Unknown protein
Location	chr05 : 23713520 .. 23715924 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTAACCCTCCGATTTCTCAGAAGCAGCCAAAACCAAAAGGTAAGAAACCCCACTGCCTCTTCTCTTCATTATTGCTTTATATTTTCTATTCCATGTTTAAAATATTAATTACTAACTTGCTTTCTTGTCGGCTAAACTGAGATCCTCATTTCATTTCCTTTATTATTCTACTTGTTTCATTGATTTTCGTGTTCCTGCTTTGTTCTTTTGTTCTTTGAATTTTCTTTTCCGCTGATCCTGATTTCATATGAAACGAAATGTTAAATATATTTACGTTAATGAGAATCAGCCATTTCCACGAAAATCCTGGTTTCTTGTGGCTGGAAATTTAATATTCAACGAAAATACCGCACATTCTTGTACTATATGCTTGCATGTGTTGTAGTAATAGAGTTTCCAGTGGACTTTTAAATAGTTTCTGATAATATATATTGAATATTGTATGATATAGAGCTGTTCTTTAAATCATTCTTTTGTACTTTATTGTTATTATTGTTTGTTGTATTTTTTGATCTCATGAACTGAGTATATCCTAGCCGAAGAGAGAGTAATGTATCGTGAAAGCTTGGTGTAAAACTGGACGTGGGTAAGATTATGGATTCTTGGACAAGGGAAAGTTGTCAAGGCGTTGGGGCTTTATTGGCGTCAACAAATCTTGAAAAGCATAAATTAATTACAATAATCCTGTAAATAGGATGAAATGGCTGGAGTTGCGTTTAGTACAAGCTTCTTGTATTTGGTAGATGAGGTTTAGTGACAGGTAGGCAACCAGGTTAGAGAAGTTGTGCTATGTTACATAGAAAGGAATCAAAAAACTATTGTCTCTTTAGAATTAGCTTTAACTTAGGCGGGAAAATGAACGGAGAAAATCAAGCTATAACACTGCTATAGTTGCAAAAAGTTCTTATAAAATCGACAATAAAGTAGAAATGTAGAGACTTTTAGATTTGAGTAATACCCTTTAGCATATCAGAAAAATTTTGTCTTTTTAAAATTGGATGGGACGGTCAAGGTGTTCATAAAAATCTCATTTCTAAAAAGGAATTTAATCGGATAATTATTTTTTAGTGCATCAAATGCATATTAACATGAAAGTCAAGCTTAACAGATTTAGAAAGTGCATTCTTGTAAGAATAAACAAAAGGAGTGAAGGGACACAAACTATATGGTCACTAGAACCGATTGGAGACTTGTGTATAACCAACAATGATTTTTCTTTTGATAAAGCAACTAGTCTGGTATTTTTTGGTGAGCTGGTGTGTTCTAGCTTGGTAAATTAGTTATGCAATAGAAGTAACAAAGTCAAGAGGATTTACATCAGTGTAATTGATCTTCAAAAATTTTGTAATAGTGGAGGTGTAGATCTAATTGCACTGTGGATGCGGACCACATGCAGCTGAACCACTTAAATCCTTGTTCTTATTCACTCTGCTCTTGATTGTGTATTGTCTTTCTTGATTTCAGAACAGTGTAACAAGTTAATGCAAACTTTTGACATGCCATTACGTATTATTTGAAATTTTTCATGTATGCTCAACTCAGGAGTTCAATTCCACTTGGGCACATTTACCTTTTTCTCTCTCTTTTAAATTCAACTTCAGAATGAGTTTGCCATACACCTGATTTCACCATAAGCAATTTCTTATAATATCAAGAATGAAATTATATATCTGGACCTTGGTTAATTATGTTATTAATCCTTGCTTTTGGTTGTGGTAGAAAACACAGCAATGTCAAAGCAGGTTGGTCGTTACGATGGTGGGTACCAGAACTATGACTACGATTATTCGGATGACTATTCATACAATCAAGGACCAGAAGTTCAGGCAACAATTGGATATCTTGAGGTTGTGGAGGACAACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTATACGACCACCTCAACAAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACTGGGAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACGTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTCCGCCGAGTTGATTTCGGCGGAAGCAGCAGTGGATCTGGTAGTAAGGGGGGAAAGGGCAACAAATATCTCAAATGAAGGGGTGTGGTAACTATATGATGATTGGCTCTCTTGCTTAGAAGAATGTAGTTATTTTTGTGCAGACTTCGGTTGGTGTTAATATGATGGTTTCTGATGGTCTGAACTTTGGGTGTTGGACGATAGATCTAAGAGGGCCCTTTTGTTGGTCTGTTTTGGTTGTGCTTGTAAATGCTCTAATAGGTTTAGAGAGATGAATTAAATTCCAAAAACCAAAAAGTAAATGGTATCTCGTTTTGTTG

mRNA sequence

AACCCTAACCCTCCGATTTCTCAGAAGCAGCCAAAACCAAAAGAAAACACAGCAATGTCAAAGCAGGTTGGTCGTTACGATGGTGGGTACCAGAACTATGACTACGATTATTCGGATGACTATTCATACAATCAAGGACCAGAAGTTCAGGCAACAATTGGATATCTTGAGGTTGTGGAGGACAACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTATACGACCACCTCAACAAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACTGGGAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACGTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTCCGCCGAGTTGATTTCGGCGGAAGCAGCAGTGGATCTGGTAGTAAGGGGGGAAAGGGCAACAAATATCTCAAATGAAGGGGTGTGGTAACTATATGATGATTGGCTCTCTTGCTTAGAAGAATGTAGTTATTTTTGTGCAGACTTCGGTTGGTGTTAATATGATGGTTTCTGATGGTCTGAACTTTGGGTGTTGGACGATAGATCTAAGAGGGCCCTTTTGTTGGTCTGTTTTGGTTGTGCTTGTAAATGCTCTAATAGGTTTAGAGAGATGAATTAAATTCCAAAAACCAAAAAGTAAATGGTATCTCGTTTTGTTG

Coding sequence (CDS)

ATGTCAAAGCAGGTTGGTCGTTACGATGGTGGGTACCAGAACTATGACTACGATTATTCGGATGACTATTCATACAATCAAGGACCAGAAGTTCAGGCAACAATTGGATATCTTGAGGTTGTGGAGGACAACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTATACGACCACCTCAACAAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACTGGGAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACGTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTCCGCCGAGTTGATTTCGGCGGAAGCAGCAGTGGATCTGGTAGTAAGGGGGGAAAGGGCAACAAATATCTCAAATGA

Protein sequence

MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRRVDFGGSSSGSGSKGGKGNKYLK

Homology

[Close]

BLAST of MELO3C004079.2 vs. NCBI nr
Match: XP_008452151.1 (PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 4.0e-65
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60
           MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120
           RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120

Query: 121 VDFGGSSSGSGSKGGKGNKYLK 143
           VDFGGSSSGSGSKGGKGNKYLK
Sbjct: 121 VDFGGSSSGSGSKGGKGNKYLK 142

[Close]

BLAST of MELO3C004079.2 vs. NCBI nr
Match: KGN61102.1 (hypothetical protein Csa_2G049910 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 6.6e-44
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQN  YDYS+DYSYNQG EVQATIGY+EV+ED NQMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGHYDGGYQN--YDYSNDYSYNQGQEVQATIGYIEVIED-NQMSSYEQSWRTHDRN 60

Query: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQER RR
Sbjct: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERLRR 118

Query: 121 V 122
           +
Sbjct: 121 I 118

[Close]

BLAST of MELO3C004079.2 vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima])

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 91/143 (63.64%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 3   KQVGRYDGGYQNYDYDYSDDYSY---NQGPEVQATIGYLEVVE-DNNQMSSYEQSWRTHD 62
           KQ+ ++  GYQ+YDYD  DDYSY   +QG    A +GY+ VV  ++ Q+SSYEQSWRTHD
Sbjct: 4   KQLDQWGSGYQSYDYDL-DDYSYSPPSQGNVQVARMGYVGVVSAEDKQVSSYEQSWRTHD 63

Query: 63  RNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERF 122
           RNRQTGSYTT STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QERF
Sbjct: 64  RNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQHQERF 123

Query: 123 RRVDFGGSSSGS--GSKGGKGNK 140
           RRVDFG  SS S  GS G KG K
Sbjct: 124 RRVDFGSGSSSSIRGSAGSKGGK 145

[Close]

BLAST of MELO3C004079.2 vs. NCBI nr
Match: XP_022929740.1 (uncharacterized protein LOC111436237 [Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 4.9e-31
Identity = 85/134 (63.43%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 3   KQVGRYDGGYQNYDYDYSDDYSYN---QGPEVQATIGYLEVVE-DNNQMSSYEQSWRTHD 62
           KQ+ ++  GYQ+YD D  DDYSY+   QG    A IGY+ VV  +  Q+SSYEQSWRTHD
Sbjct: 4   KQLDQWGNGYQSYDDDL-DDYSYSPPLQGNVQVARIGYVGVVSAEVKQVSSYEQSWRTHD 63

Query: 63  RNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERF 122
           RNRQTGSYTT STK VASRGETFKERS+GRVG+KDE           +SGYTEYQ QERF
Sbjct: 64  RNRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQRQERF 123

Query: 123 RRVDFGGSSSGSGS 133
           RRVDFG   S S S
Sbjct: 124 RRVDFGSGGSSSNS 136

[Close]

BLAST of MELO3C004079.2 vs. NCBI nr
Match: XP_022157391.1 (uncharacterized protein LOC111024099 [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-28
Identity = 77/122 (63.11%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 26  NQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRNRQTGSYTTTSTKAVASRGETFKERS 85
           +QG E+Q   GY  VV+++NQ S YE+SWR HDR+RQTG+Y T STK VASRGETFKERS
Sbjct: 28  SQGYEIQPRCGYAVVVQEDNQASRYEKSWRCHDRDRQTGNYKTASTKEVASRGETFKERS 87

Query: 86  TGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRRVDFGGSSSGSGSKGGKGN-----KY 143
           TGRVG KDE           +SGYTEYQ QE +RRVDFG  SSGSGSKGG+ N     KY
Sbjct: 88  TGRVGYKDEFKTTSTCRVGDRSGYTEYQRQETYRRVDFG--SSGSGSKGGQSNYSSSKKY 147

[Close]

BLAST of MELO3C004079.2 vs. TrEMBL
Match: tr|A0A1S3BT44|A0A1S3BT44_CUCME (uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.6e-65
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60
           MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120
           RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120

Query: 121 VDFGGSSSGSGSKGGKGNKYLK 143
           VDFGGSSSGSGSKGGKGNKYLK
Sbjct: 121 VDFGGSSSGSGSKGGKGNKYLK 142

[Close]

BLAST of MELO3C004079.2 vs. TrEMBL
Match: tr|A0A0A0LK69|A0A0A0LK69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQN  YDYS+DYSYNQG EVQATIGY+EV+ED NQMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGHYDGGYQN--YDYSNDYSYNQGQEVQATIGYIEVIED-NQMSSYEQSWRTHDRN 60

Query: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRR 120
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQER RR
Sbjct: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERLRR 118

Query: 121 V 122
           +
Sbjct: 121 I 118

[Close]

BLAST of MELO3C004079.2 vs. TrEMBL
Match: tr|A0A061GQI1|A0A061GQI1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038892 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-13
Identity = 53/111 (47.75%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 34  TIGYLEVVEDNNQMSSYEQSWRTHDRNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKD 93
           T  Y    +   Q S  + + +T   ++QTGSYT  + K V S GETFKERSTGRVG KD
Sbjct: 26  TSSYNYQSQQGGQSSCNQTTSKTSYVDKQTGSYTRATNKEVVSTGETFKERSTGRVGYKD 85

Query: 94  EXXXXXXXXXXXKSGYTEYQCQERFRRVDFGGSSSGS--GSKGGKGNKYLK 143
           E           KSGYTEYQ +ERFR V + G+SS +   + GG  NKYLK
Sbjct: 86  EYKTTSTYKVGDKSGYTEYQVEERFRNVKYSGNSSSNKGNNSGGWNNKYLK 136

[Close]

BLAST of MELO3C004079.2 vs. TrEMBL
Match: tr|A0A1R3J9H2|A0A1R3J9H2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07098 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 11  GYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRNRQTGSYTTTS 70
           G++N    Y+     N     + T  Y   V    Q   Y+++ +T+  ++QTG Y   +
Sbjct: 67  GHRNAYVGYAQTVPKNDHYGEKQTTSYNYQVRQGQQSGLYQRTSKTNSMDKQTGKYARVT 126

Query: 71  TKAVASRGETFKERSTGRVGAKDEXXXXXXXXXXXKSGYTEYQCQERFRRVDFGGSSSGS 130
            K V S GETFKERSTGRVG KDE           KSGY EYQ +ERFR ++FGGS S +
Sbjct: 127 NKDVFSGGETFKERSTGRVGFKDEYKTTSTYRLGDKSGYCEYQIEERFRMINFGGSGSSN 186

Query: 131 GSKGGKG 138
            + G  G
Sbjct: 187 NNSGNYG 193

[Close]

BLAST of MELO3C004079.2 vs. TrEMBL
Match: tr|A0A067L5T5|A0A067L5T5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23029 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 37  YLEVVEDNNQMSSYEQSWRTHDRNRQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEXX 96
           Y  +     Q +S +   R    ++QTGSY  T+ K   S G+ FKERSTGRVG KDE  
Sbjct: 31  YNAMATKGQQSNSQQWISRNSIVDKQTGSYAKTTVKQSYSSGDVFKERSTGRVGHKDELK 90

Query: 97  XXXXXXXXXKSGYTEYQCQERFRRVDFGGSSSGSGSKGGKGNKYLK 143
                    KSGY EYQ +ERFR+VD+G SSS +        KYLK
Sbjct: 91  TTSTFKVGDKSGYYEYQVEERFRKVDYGNSSSSN-------KKYLK 129

The following BLAST results are available for this feature:

BLAST of MELO3C004079.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452151.1	4.0e-65	100.00	PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo]	[more]
KGN61102.1	6.6e-44	90.08	hypothetical protein Csa_2G049910 [Cucumis sativus]	[more]
XP_022997473.1	1.1e-33	63.64	uncharacterized protein LOC111492379 [Cucurbita maxima]	[more]
XP_022929740.1	4.9e-31	63.43	uncharacterized protein LOC111436237 [Cucurbita moschata]	[more]
XP_022157391.1	1.0e-28	63.11	uncharacterized protein LOC111024099 [Momordica charantia]	[more]

BLAST of MELO3C004079.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C004079.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C004079.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BT44\|A0A1S3BT44_CUCME	2.6e-65	100.00	uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=...	[more]
tr\|A0A0A0LK69\|A0A0A0LK69_CUCSA	4.4e-44	90.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1	[more]
tr\|A0A061GQI1\|A0A061GQI1_THECC	1.4e-13	47.75	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038892 PE=4 SV=1	[more]
tr\|A0A1R3J9H2\|A0A1R3J9H2_COCAP	1.2e-12	40.16	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07098 PE=4 ...	[more]
tr\|A0A067L5T5\|A0A067L5T5_JATCU	4.1e-10	44.34	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23029 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004079.2.1	MELO3C004079.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004079.2	Csa2G049910	Cucumber (Chinese Long) v2	cumedB132
MELO3C004079.2	CSPI02G05680	Wild cucumber (PI 183967)	cpimedB132
MELO3C004079.2	CmaCh05G006740	Cucurbita maxima (Rimu)	cmamedB831
MELO3C004079.2	CmoCh05G007090	Cucurbita moschata (Rifu)	cmomedB822
MELO3C004079.2	Lsi11G007320	Bottle gourd (USVL1VR-Ls)	lsimedB123
MELO3C004079.2	Cp4.1LG11g06050	Cucurbita pepo (Zucchini)	cpemedB129
MELO3C004079.2	Cla022851	Watermelon (97103) v1	medwmB411
MELO3C004079.2	ClCG11G012490	Watermelon (Charleston Gray)	medwcgB362
MELO3C004079.2	Cla97C11G218330	Watermelon (97103) v2	medwmbB360
MELO3C004079.2	Bhi06G001158	Wax gourd	medwgoB456
MELO3C004079.2	Carg08363	Silver-seed gourd	carmedB0062
MELO3C004079.2	CsaV3_2G008040	Cucumber (Chinese Long) v3	cucmedB134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004079.2	Watermelon (Charleston Gray)	medwcgB388
MELO3C004079.2	Watermelon (97103) v1	medwmB427
MELO3C004079.2	Watermelon (97103) v2	medwmbB389
MELO3C004079.2	Wax gourd	medwgoB494
MELO3C004079.2	Cucumber (Gy14) v2	cgybmedB118
MELO3C004079.2	Cucumber (Gy14) v1	cgymedB104
MELO3C004079.2	Cucurbita maxima (Rimu)	cmamedB081
MELO3C004079.2	Cucurbita maxima (Rimu)	cmamedB192
MELO3C004079.2	Cucurbita moschata (Rifu)	cmomedB075
MELO3C004079.2	Cucurbita moschata (Rifu)	cmomedB183
MELO3C004079.2	Cucurbita pepo (Zucchini)	cpemedB915