Carg08167 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCAATCTCCGCCGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGAGAATAGGTTTTGGCATGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGCGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAGACATGTAGCGTTTGCCGAATCGACGGTTGTTTAGGTTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGCTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAAGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGTCCGCGAGCGAAGCTTAATTTTCCATTTACGGATGATTCGTTGCGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAATTGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCAATCTCCGCCGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGAGAATAGGTTTTGGCATGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGCGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAGACATGTAGCGTTTGCCGAATCGACGGTTGTTTAGGTTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGCTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAAGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGTCCGCGAGCGAAGCTTAATTTTCCATTTACGGATGATTCGTTGCGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAATTGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCAATCTCCGCCGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGAGAATAGGTTTTGGCATGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGCGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAGACATGTAGCGTTTGCCGAATCGACGGTTGTTTAGGTTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGCTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAAGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGTCCGCGAGCGAAGCTTAATTTTCCATTTACGGATGATTCGTTGCGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAATTGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG MSSLKRSRSTEFSESYFSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDFMENRFWHDFQIPPPTFDCATSAASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDDSLRMMSSEQQEQRPEIEMSKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGIWEFS
BLAST of Carg08167 vs. NCBI nr
Match: XP_022942387.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita moschata]) HSP 1 Score: 525.0 bits (1351), Expect = 1.6e-145 Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg08167 vs. NCBI nr
Match: XP_022982227.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita maxima]) HSP 1 Score: 500.7 bits (1288), Expect = 3.1e-138 Identity = 264/281 (93.95%), Postives = 266/281 (94.66%), Query Frame = 0
BLAST of Carg08167 vs. NCBI nr
Match: XP_023553443.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 500.0 bits (1286), Expect = 5.3e-138 Identity = 270/281 (96.09%), Postives = 271/281 (96.44%), Query Frame = 0
BLAST of Carg08167 vs. NCBI nr
Match: XP_004140802.1 (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus] >KGN57539.1 hypothetical protein Csa_3G207390 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 7.8e-89 Identity = 190/291 (65.29%), Postives = 211/291 (72.51%), Query Frame = 0
BLAST of Carg08167 vs. NCBI nr
Match: XP_008456122.1 (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo]) HSP 1 Score: 325.1 bits (832), Expect = 2.4e-85 Identity = 201/285 (70.53%), Postives = 219/285 (76.84%), Query Frame = 0
BLAST of Carg08167 vs. TAIR10
Match: AT4G34410.1 (redox responsive transcription factor 1) HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29 Identity = 85/207 (41.06%), Postives = 103/207 (49.76%), Query Frame = 0
BLAST of Carg08167 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Carg08167 vs. TAIR10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Carg08167 vs. TAIR10
Match: AT3G14230.1 (related to AP2 2) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-22 Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of Carg08167 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110) HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22 Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Carg08167 vs. Swiss-Prot
Match: sp|Q9SZ06|EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.9e-28 Identity = 85/207 (41.06%), Postives = 103/207 (49.76%), Query Frame = 0
BLAST of Carg08167 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Carg08167 vs. Swiss-Prot
Match: sp|O22259|ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.4e-22 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Carg08167 vs. Swiss-Prot
Match: sp|Q9LUM4|RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2) HSP 1 Score: 103.6 bits (257), Expect = 3.6e-21 Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of Carg08167 vs. Swiss-Prot
Match: sp|Q70II3|EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 4.8e-21 Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Carg08167 vs. TrEMBL
Match: tr|A0A0A0L9A3|A0A0A0L9A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207390 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 5.2e-89 Identity = 190/291 (65.29%), Postives = 211/291 (72.51%), Query Frame = 0
BLAST of Carg08167 vs. TrEMBL
Match: tr|A0A1S3C3R9|A0A1S3C3R9_CUCME (ethylene-responsive transcription factor ERF109 OS=Cucumis melo OX=3656 GN=LOC103496155 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85 Identity = 201/285 (70.53%), Postives = 219/285 (76.84%), Query Frame = 0
BLAST of Carg08167 vs. TrEMBL
Match: tr|A0A2C9V3H0|A0A2C9V3H0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G056300 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49 Identity = 125/270 (46.30%), Postives = 167/270 (61.85%), Query Frame = 0
BLAST of Carg08167 vs. TrEMBL
Match: tr|A0A097LG53|A0A097LG53_9ROSA (EREBP-like factor OS=Prunus pseudocerasus OX=151439 GN=ERF2 PE=2 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 2.0e-48 Identity = 124/271 (45.76%), Postives = 153/271 (56.46%), Query Frame = 0
BLAST of Carg08167 vs. TrEMBL
Match: tr|A0A0M4KSE3|A0A0M4KSE3_9ROSA (AP2/EREBP family transcription factor-like protein 11 OS=Prunus pseudocerasus OX=151439 PE=2 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48 Identity = 124/274 (45.26%), Postives = 153/274 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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