CmaCh16G003580 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G003580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor 10
LocationCma_Chr16 : 1703592 .. 1704293 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTCTCGATCTCGATCCACGGAATCGCCGGAATCGTATCACTTCTCTCTTCCGCCGCATTCCATGGCGGATAGGTTTTGGCGCGAGCTTCAAATTCCGCTTCCTACATTTGATTGTGCCGCCTCCGCCTCCGCTTCCGATTTCTTCTCCGCTTCTGCAACTACTTCTTCCGTCACTTGTTCGAGTACGGACGCGATTTTCTCTCCCTCTGGTTTCGAGACGTGTAGCGTTTGTCGAATCGATGGCTGTTTAGGCTGCAATTTCTTCCCGCCGTCATCGTCACCGGTCGAAGGCGAGAAGATAAGCGGTAAGAAGCGTTTGAAGAAAATTTACAGAGGCGTTCGACAGCGGCCGTGGGGGAAATGGGTGGCCGAAATCCGAAATCCGAAACTCGCAACCAGAGTCTGGTTAGGAACCTTCAATACTGCCGAAGAGGCCGCTAGGGCTTACGATAAAGCCGCGTTGGAATTCCGAGGGCCCCGAGCGAAGCTTAATTTTCCGTTTACTGATGATTCACTGAGAACAATGAGGCCGGAAAATGAAATTTCGAAGAACGGTAGAAATTCGGCGGCGAATGGAATCGAAAATGAAGATGAAATATGGAGGAAGATTGAGAAGGATGAAATGGATCAATGGATCTCGTCGCTGATCACGGATCACGGCGGCGATTCGTCAGACTCCACCAGTATTGGGGCTTGA

mRNA sequence

ATGACCTCTCGATCTCGATCCACGGAATCGCCGGAATCGTATCACTTCTCTCTTCCGCCGCATTCCATGGCGGATAGGTTTTGGCGCGAGCTTCAAATTCCGCTTCCTACATTTGATTGTGCCGCCTCCGCCTCCGCTTCCGATTTCTTCTCCGCTTCTGCAACTACTTCTTCCGTCACTTGTTCGAGTACGGACGCGATTTTCTCTCCCTCTGGTTTCGAGACGTGTAGCGTTTGTCGAATCGATGGCTGTTTAGGCTGCAATTTCTTCCCGCCGTCATCGTCACCGGTCGAAGGCGAGAAGATAAGCGGTAAGAAGCGTTTGAAGAAAATTTACAGAGGCGTTCGACAGCGGCCGTGGGGGAAATGGGTGGCCGAAATCCGAAATCCGAAACTCGCAACCAGAGTCTGGTTAGGAACCTTCAATACTGCCGAAGAGGCCGCTAGGGCTTACGATAAAGCCGCGTTGGAATTCCGAGGGCCCCGAGCGAAGCTTAATTTTCCGTTTACTGATGATTCACTGAGAACAATGAGGCCGGAAAATGAAATTTCGAAGAACGGTAGAAATTCGGCGGCGAATGGAATCGAAAATGAAGATGAAATATGGAGGAAGATTGAGAAGGATGAAATGGATCAATGGATCTCGTCGCTGATCACGGATCACGGCGGCGATTCGTCAGACTCCACCAGTATTGGGGCTTGA

Coding sequence (CDS)

ATGACCTCTCGATCTCGATCCACGGAATCGCCGGAATCGTATCACTTCTCTCTTCCGCCGCATTCCATGGCGGATAGGTTTTGGCGCGAGCTTCAAATTCCGCTTCCTACATTTGATTGTGCCGCCTCCGCCTCCGCTTCCGATTTCTTCTCCGCTTCTGCAACTACTTCTTCCGTCACTTGTTCGAGTACGGACGCGATTTTCTCTCCCTCTGGTTTCGAGACGTGTAGCGTTTGTCGAATCGATGGCTGTTTAGGCTGCAATTTCTTCCCGCCGTCATCGTCACCGGTCGAAGGCGAGAAGATAAGCGGTAAGAAGCGTTTGAAGAAAATTTACAGAGGCGTTCGACAGCGGCCGTGGGGGAAATGGGTGGCCGAAATCCGAAATCCGAAACTCGCAACCAGAGTCTGGTTAGGAACCTTCAATACTGCCGAAGAGGCCGCTAGGGCTTACGATAAAGCCGCGTTGGAATTCCGAGGGCCCCGAGCGAAGCTTAATTTTCCGTTTACTGATGATTCACTGAGAACAATGAGGCCGGAAAATGAAATTTCGAAGAACGGTAGAAATTCGGCGGCGAATGGAATCGAAAATGAAGATGAAATATGGAGGAAGATTGAGAAGGATGAAATGGATCAATGGATCTCGTCGCTGATCACGGATCACGGCGGCGATTCGTCAGACTCCACCAGTATTGGGGCTTGA

Protein sequence

MTSRSRSTESPESYHFSLPPHSMADRFWRELQIPLPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPPSSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRTMRPENEISKNGRNSAANGIENEDEIWRKIEKDEMDQWISSLITDHGGDSSDSTSIGA
Homology
[Close]
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 95/214 (44.39%), Postives = 118/214 (55.14%), Query Frame = 1 

Query: 50  FSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCN-FFPPS--------------- 109
           FS+ +T  S      D+       +TC VCRI+GCLGCN FF P+               
Sbjct: 53  FSSDSTVISAGMPRLDS-------DTCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITS 112

Query: 110 -------SSPVE-----GEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTF 169
                  SSPV      G KI  +K  K  YRGVRQRPWGK+ AEIR+PK ATRVWLGTF
Sbjct: 113 SSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTF 172

Query: 170 NTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRTMRPENEISKNGRNSAANGIENEDEI 229
            TAE+AARAYD+AA+ FRGPRAKLNFPF D +     P        + SA+  +   D +
Sbjct: 173 ETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASVSATDSV 232

[Close]
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.6e-22
Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1 

Query: 109 KKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFP 168
           K+ YRGVRQRPWGKW AEIR+P  A RVWLGTF+TAE AARAYD+AAL FRG +AKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 169 FTDDSLRTMRPENEISKNGRNSAANGIENEDEIWRKIEKDEMDQWISSLITDHGGDSS 227
              + +R + P   + ++  ++ AN          K E+D ++ W  + +    G  S
Sbjct: 134 ---EDVRILPPPPPLLRSPADTVAN----------KAEEDLINYWSYTKLLQSSGQRS 178

[Close]
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1 

Query: 100 EKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFR 159
           E+  GK+  K +YRG+RQRPWGKW AEIR+P    RVWLGTF TA+EAARAYD AA++ R
Sbjct: 38  EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIR 97

Query: 160 GPRAKLNFPFT 171
           G +AKLNFP T
Sbjct: 98  GRKAKLNFPNT 108

[Close]
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 1 

Query: 93  SSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYD 152
           SSS    EK + ++R    YRGVRQRPWGKW AEIR+P  A RVWLGTF+TAEEAA AYD
Sbjct: 54  SSSLTLQEKSNSRQRN---YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYD 113

Query: 153 KAALEFRGPRAKLNFP 169
           KAA EFRG +AKLNFP
Sbjct: 114 KAAFEFRGHKAKLNFP 126

[Close]
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 1 

Query: 98  EGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 157
           E E     +R KK YRGVRQRPWGKW AEIR+P  ATRVWLGTF TAE AARAYD AAL 
Sbjct: 48  ECESSMSLERPKK-YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALR 107

Query: 158 FRGPRAKLNFP 169
           FRG +AKLNFP
Sbjct: 108 FRGSKAKLNFP 117

[Close]
BLAST of CmaCh16G003580 vs. TrEMBL
Match: A0A0A0L9A3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207390 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 172/268 (64.18%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 3   SRSRSTESPESYHFSLPP----------------------------HSMADRFWRELQIP 62
           S S S++SP+SYHFSLPP                            +SMAD FWR+ Q P
Sbjct: 9   SPSPSSQSPDSYHFSLPPPSISSDQELSVIVTALTSVVSGTSSHLHYSMADAFWRQNQTP 68

Query: 63  LPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPPS- 122
           LP+F        SD FS SAT SS T S+T  IF PS FETC+VC+I GCLGCNFFPPS 
Sbjct: 69  LPSFH-------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSA 128

Query: 123 --SSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAY 182
             SS +  EK +  KR KK YRGVRQRPWGKW AEIRNPKLATRVWLGTFNTAEEAARAY
Sbjct: 129 SSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAY 188

Query: 183 DKAALEFRGPRAKLNFPFTDDSLRTM-------RPENEISKNGRNSAANGIENEDEIWRK 233
           DKAALEFRGPRAKLNFPFTDDSLR M       R E+EIS+N  NSA  GI NEDEIW K
Sbjct: 189 DKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGK 248

[Close]
BLAST of CmaCh16G003580 vs. TrEMBL
Match: A0A067LCS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01609 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-46
Identity = 104/203 (51.23%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 43  SASASDFFSASATTSSVTCSSTDAIFSP----SGFETCSVCRIDGCLGCNFFPPSSSPVE 102
           +A+AS    A+A  S+   ++TD++++P    S  +TC++C+I GCLGCNFFPP+     
Sbjct: 41  AAAASSSSPATAVASTAVTTTTDSLYNPIPPPSDLDTCNICKIKGCLGCNFFPPNQE--- 100

Query: 103 GEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEF 162
            EK   +KR+KK YRGVRQRPWGKW AEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++F
Sbjct: 101 -EKKGTRKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDF 160

Query: 163 RGPRAKLNFPFTDDSLRTMR-----PENEISKNGRNSAAN---GIENEDEIWRKIEKDEM 222
           RGPRAKLNFPF D++   +       E +  +NG+         +  E E W KI +DE+
Sbjct: 161 RGPRAKLNFPFPDNTASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEI 220

Query: 223 DQWISSLITDHGGDSSDSTSIGA 234
            QW++ +  D  GDSSDST   A
Sbjct: 221 QQWMNMM--DFNGDSSDSTGTAA 237

[Close]
BLAST of CmaCh16G003580 vs. TrEMBL
Match: M5VID5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023235mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-43
Identity = 110/218 (50.46%), Postives = 131/218 (60.09%), Query Frame = 1 

Query: 35  LPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPPSS 94
           LP   CAA++         AT SS  C S DA+ + S  +TC+VC+I GCLGCNFFPP +
Sbjct: 62  LPPLQCAATSYQG------ATGSS--CYS-DALLTQSDLDTCNVCKIKGCLGCNFFPPPA 121

Query: 95  SPVEGE--KISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYD 154
              +G   K   KKR+KK YRGVRQRPWGKW AEIR+P+ ATRVWLGTF TAEEAARAYD
Sbjct: 122 PEEKGNNNKKGPKKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYD 181

Query: 155 KAALEFRGPRAKLNFPFTDDSLRT-----------------MRPENEISKN-GRNSAANG 214
           KAA+EFRGPRAKLNFPF D +L T                     NE S+         G
Sbjct: 182 KAAIEFRGPRAKLNFPFPDTTLLTQETNPAQPAQPQPVVTEQETSNEFSREIEMTEIGKG 241

Query: 215 IENEDEIWRKIEKDEMDQWISSL--ITDHGGDSSDSTS 231
            E E E W  I +DE+ QW+  +   TDH  DS ++ S
Sbjct: 242 KEKEKEFWEMIGEDEIQQWMRMMDFATDHSSDSGNAQS 270

[Close]
BLAST of CmaCh16G003580 vs. TrEMBL
Match: U7E1P3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0270s00200g PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 101/214 (47.20%), Postives = 132/214 (61.68%), Query Frame = 1 

Query: 26  RFWRELQIPLPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSG-FETCSVCRIDGC 85
           R +  L +P+ T       S S F S S+  +    S    I+ PS   + C+VC+I GC
Sbjct: 56  REFNSLNVPITT-------SYSQFGSRSSNGNGFCIS----IWPPSSDLDMCAVCKIKGC 115

Query: 86  LGCNFFPPSSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTA 145
           LGCNFFPP+    + +K   +KR+KK YRGVRQRPWGKW AEIR+P+ A RVWLGTF+TA
Sbjct: 116 LGCNFFPPNQEDKKDDKKGKRKRVKKNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFSTA 175

Query: 146 EEAARAYDKAALEFRGPRAKLNFPFTDDSLRTM-----RPENEISKNGRNSAANGIE--- 205
           EEAARAYDKAA++FRGPRAKLNFPF D  + +      + E +  +   +   +G E   
Sbjct: 176 EEAARAYDKAAIDFRGPRAKLNFPFPDSGISSFEESKEKQEEQAKQQEISEKKSGFEAEM 235

Query: 206 -NEDEIWRKIEKDEMDQWISSLITDHGGDSSDST 230
             E E W KI  DE+ +W+  ++    GDSSDST
Sbjct: 236 GKESEFWDKIGDDEIHEWMMMMLDFSNGDSSDST 258

[Close]
BLAST of CmaCh16G003580 vs. TrEMBL
Match: B9N4Y0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14840g PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 101/214 (47.20%), Postives = 132/214 (61.68%), Query Frame = 1 

Query: 26  RFWRELQIPLPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSG-FETCSVCRIDGC 85
           R +  L +P+ T       S S F S S+  +    S    I+ PS   + C+VC+I GC
Sbjct: 56  REFNSLNVPITT-------SYSQFGSRSSNGNGFCIS----IWPPSSDLDMCAVCKIKGC 115

Query: 86  LGCNFFPPSSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTA 145
           LGCNFFPP+    + +K   +KR+KK YRGVRQRPWGKW AEIR+P+ A RVWLGTF+TA
Sbjct: 116 LGCNFFPPNQEDKKDDKKGKRKRVKKNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFSTA 175

Query: 146 EEAARAYDKAALEFRGPRAKLNFPFTDDSLRTM-----RPENEISKNGRNSAANGIE--- 205
           EEAARAYDKAA++FRGPRAKLNFPF D  + +      + E +  +   +   +G E   
Sbjct: 176 EEAARAYDKAAIDFRGPRAKLNFPFPDSGISSFEESKEKQEEQAKQQEISEKKSGFEAEM 235

Query: 206 -NEDEIWRKIEKDEMDQWISSLITDHGGDSSDST 230
             E E W KI  DE+ +W+  ++    GDSSDST
Sbjct: 236 GKESEFWDKIGDDEIHEWMMMMLDFSNGDSSDST 258

[Close]
BLAST of CmaCh16G003580 vs. TAIR10
Match: AT4G34410.1 (AT4G34410.1 redox responsive transcription factor 1)

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 95/214 (44.39%), Postives = 118/214 (55.14%), Query Frame = 1 

Query: 50  FSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCN-FFPPS--------------- 109
           FS+ +T  S      D+       +TC VCRI+GCLGCN FF P+               
Sbjct: 53  FSSDSTVISAGMPRLDS-------DTCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITS 112

Query: 110 -------SSPVE-----GEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTF 169
                  SSPV      G KI  +K  K  YRGVRQRPWGK+ AEIR+PK ATRVWLGTF
Sbjct: 113 SSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTF 172

Query: 170 NTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRTMRPENEISKNGRNSAANGIENEDEI 229
            TAE+AARAYD+AA+ FRGPRAKLNFPF D +     P        + SA+  +   D +
Sbjct: 173 ETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASVSATDSV 232

[Close]
BLAST of CmaCh16G003580 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23
Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1 

Query: 109 KKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFP 168
           K+ YRGVRQRPWGKW AEIR+P  A RVWLGTF+TAE AARAYD+AAL FRG +AKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 169 FTDDSLRTMRPENEISKNGRNSAANGIENEDEIWRKIEKDEMDQWISSLITDHGGDSS 227
              + +R + P   + ++  ++ AN          K E+D ++ W  + +    G  S
Sbjct: 134 ---EDVRILPPPPPLLRSPADTVAN----------KAEEDLINYWSYTKLLQSSGQRS 178

[Close]
BLAST of CmaCh16G003580 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-23
Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1 

Query: 100 EKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFR 159
           E+  GK+  K +YRG+RQRPWGKW AEIR+P    RVWLGTF TA+EAARAYD AA++ R
Sbjct: 38  EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIR 97

Query: 160 GPRAKLNFPFT 171
           G +AKLNFP T
Sbjct: 98  GRKAKLNFPNT 108

[Close]
BLAST of CmaCh16G003580 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 1 

Query: 93  SSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYD 152
           SSS    EK + ++R    YRGVRQRPWGKW AEIR+P  A RVWLGTF+TAEEAA AYD
Sbjct: 54  SSSLTLQEKSNSRQRN---YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYD 113

Query: 153 KAALEFRGPRAKLNFP 169
           KAA EFRG +AKLNFP
Sbjct: 114 KAAFEFRGHKAKLNFP 126

[Close]
BLAST of CmaCh16G003580 vs. TAIR10
Match: AT1G43160.1 (AT1G43160.1 related to AP2 6)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22
Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 1 

Query: 98  EGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 157
           E E     +R KK YRGVRQRPWGKW AEIR+P  ATRVWLGTF TAE AARAYD AAL 
Sbjct: 48  ECESSMSLERPKK-YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALR 107

Query: 158 FRGPRAKLNFP 169
           FRG +AKLNFP
Sbjct: 108 FRGSKAKLNFP 117

[Close]
BLAST of CmaCh16G003580 vs. NCBI nr
Match: gi|659112224|ref|XP_008456122.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 6.1e-91
Identity = 185/268 (69.03%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 4   RSRSTESPESYHFSLPP--------------------------------HSMADRFWREL 63
           RSRSTESP+S+HFSLPP                                +SMAD FWR+ 
Sbjct: 6   RSRSTESPQSFHFSLPPPYFRPCISTDQELSVIVTALTSVVSGTASDLHYSMADGFWRQN 65

Query: 64  QIPLPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFP 123
           Q P P+FD    + ASD FSASATTSS++ SSTDAIFSPS FETCSVC+I+GCLGCNFFP
Sbjct: 66  QTPPPSFD----SPASDSFSASATTSSLSSSSTDAIFSPSVFETCSVCQIEGCLGCNFFP 125

Query: 124 PSSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAY 183
           PSSS V  EK  G KR KK YRGVRQRPWGKW AEIRNPKLATRVWLGTFNTAEEAARAY
Sbjct: 126 PSSSQVNVEKKIGNKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAY 185

Query: 184 DKAALEFRGPRAKLNFPFTDDSLRTM-------RPENEISKNGRNSAANGIENEDEIWRK 233
           DKAALEFRGPRAKLNFPFTDDSLR M       R ENEIS+NG NS+ NGI NEDEIW K
Sbjct: 186 DKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTENEISRNGSNSSGNGIGNEDEIWGK 245

[Close]
BLAST of CmaCh16G003580 vs. NCBI nr
Match: gi|449446085|ref|XP_004140802.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 172/268 (64.18%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 3   SRSRSTESPESYHFSLPP----------------------------HSMADRFWRELQIP 62
           S S S++SP+SYHFSLPP                            +SMAD FWR+ Q P
Sbjct: 9   SPSPSSQSPDSYHFSLPPPSISSDQELSVIVTALTSVVSGTSSHLHYSMADAFWRQNQTP 68

Query: 63  LPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPPS- 122
           LP+F        SD FS SAT SS T S+T  IF PS FETC+VC+I GCLGCNFFPPS 
Sbjct: 69  LPSFH-------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSA 128

Query: 123 --SSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAY 182
             SS +  EK +  KR KK YRGVRQRPWGKW AEIRNPKLATRVWLGTFNTAEEAARAY
Sbjct: 129 SSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAY 188

Query: 183 DKAALEFRGPRAKLNFPFTDDSLRTM-------RPENEISKNGRNSAANGIENEDEIWRK 233
           DKAALEFRGPRAKLNFPFTDDSLR M       R E+EIS+N  NSA  GI NEDEIW K
Sbjct: 189 DKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGK 248

[Close]
BLAST of CmaCh16G003580 vs. NCBI nr
Match: gi|643735777|gb|KDP42285.1| (hypothetical protein JCGZ_01609 [Jatropha curcas])

HSP 1 Score: 193.4 bits (490), Expect = 4.6e-46
Identity = 104/203 (51.23%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 43  SASASDFFSASATTSSVTCSSTDAIFSP----SGFETCSVCRIDGCLGCNFFPPSSSPVE 102
           +A+AS    A+A  S+   ++TD++++P    S  +TC++C+I GCLGCNFFPP+     
Sbjct: 41  AAAASSSSPATAVASTAVTTTTDSLYNPIPPPSDLDTCNICKIKGCLGCNFFPPNQE--- 100

Query: 103 GEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEF 162
            EK   +KR+KK YRGVRQRPWGKW AEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++F
Sbjct: 101 -EKKGTRKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDF 160

Query: 163 RGPRAKLNFPFTDDSLRTMR-----PENEISKNGRNSAAN---GIENEDEIWRKIEKDEM 222
           RGPRAKLNFPF D++   +       E +  +NG+         +  E E W KI +DE+
Sbjct: 161 RGPRAKLNFPFPDNTASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEI 220

Query: 223 DQWISSLITDHGGDSSDSTSIGA 234
            QW++ +  D  GDSSDST   A
Sbjct: 221 QQWMNMM--DFNGDSSDSTGTAA 237

[Close]
BLAST of CmaCh16G003580 vs. NCBI nr
Match: gi|802563398|ref|XP_012066876.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas])

HSP 1 Score: 193.4 bits (490), Expect = 4.6e-46
Identity = 104/203 (51.23%), Postives = 137/203 (67.49%), Query Frame = 1 

Query: 43  SASASDFFSASATTSSVTCSSTDAIFSP----SGFETCSVCRIDGCLGCNFFPPSSSPVE 102
           +A+AS    A+A  S+   ++TD++++P    S  +TC++C+I GCLGCNFFPP+     
Sbjct: 63  AAAASSSSPATAVASTAVTTTTDSLYNPIPPPSDLDTCNICKIKGCLGCNFFPPNQE--- 122

Query: 103 GEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEF 162
            EK   +KR+KK YRGVRQRPWGKW AEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++F
Sbjct: 123 -EKKGTRKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDF 182

Query: 163 RGPRAKLNFPFTDDSLRTMR-----PENEISKNGRNSAAN---GIENEDEIWRKIEKDEM 222
           RGPRAKLNFPF D++   +       E +  +NG+         +  E E W KI +DE+
Sbjct: 183 RGPRAKLNFPFPDNTASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEI 242

Query: 223 DQWISSLITDHGGDSSDSTSIGA 234
            QW++ +  D  GDSSDST   A
Sbjct: 243 QQWMNMM--DFNGDSSDSTGTAA 259

[Close]
BLAST of CmaCh16G003580 vs. NCBI nr
Match: gi|595791117|ref|XP_007199307.1| (hypothetical protein PRUPE_ppa023235mg [Prunus persica])

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43
Identity = 110/218 (50.46%), Postives = 131/218 (60.09%), Query Frame = 1 

Query: 35  LPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPPSS 94
           LP   CAA++         AT SS  C S DA+ + S  +TC+VC+I GCLGCNFFPP +
Sbjct: 62  LPPLQCAATSYQG------ATGSS--CYS-DALLTQSDLDTCNVCKIKGCLGCNFFPPPA 121

Query: 95  SPVEGE--KISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARAYD 154
              +G   K   KKR+KK YRGVRQRPWGKW AEIR+P+ ATRVWLGTF TAEEAARAYD
Sbjct: 122 PEEKGNNNKKGPKKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYD 181

Query: 155 KAALEFRGPRAKLNFPFTDDSLRT-----------------MRPENEISKN-GRNSAANG 214
           KAA+EFRGPRAKLNFPF D +L T                     NE S+         G
Sbjct: 182 KAAIEFRGPRAKLNFPFPDTTLLTQETNPAQPAQPQPVVTEQETSNEFSREIEMTEIGKG 241

Query: 215 IENEDEIWRKIEKDEMDQWISSL--ITDHGGDSSDSTS 231
            E E E W  I +DE+ QW+  +   TDH  DS ++ S
Sbjct: 242 KEKEKEFWEMIGEDEIQQWMRMMDFATDHSSDSGNAQS 270

The following BLAST results are available for this feature:
BLAST of CmaCh16G003580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF109_ARATH2.9e-3244.39Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF10... [more]
EF110_ARATH4.6e-2248.31Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF11... [more]
ERF71_ARATH7.8e-2266.20Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF07... [more]
EF112_ARATH1.0e-2169.74Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF11... [more]
RAP26_ARATH3.0e-2173.24Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-... [more]
BLAST of CmaCh16G003580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A3_CUCSA1.4e-8164.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207390 PE=4 SV=1[more]
A0A067LCS4_JATCU3.2e-4651.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01609 PE=4 SV=1[more]
M5VID5_PRUPE1.9e-4350.46Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023235mg PE=4 SV=1[more]
U7E1P3_POPTR2.1e-4247.20Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0270s00200g PE=4 SV=1[more]
B9N4Y0_POPTR2.1e-4247.20Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14840g PE=4 SV=1[more]
BLAST of CmaCh16G003580 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34410.11.6e-3344.39 redox responsive transcription factor 1[more]
AT5G50080.12.6e-2348.31 ethylene response factor 110[more]
AT2G47520.14.4e-2366.20 Integrase-type DNA-binding superfamily protein[more]
AT2G33710.25.8e-2369.74 Integrase-type DNA-binding superfamily protein[more]
AT1G43160.11.7e-2273.24 related to AP2 6[more]
BLAST of CmaCh16G003580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112224|ref|XP_008456122.1|6.1e-9169.03PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo][more]
gi|449446085|ref|XP_004140802.1|2.0e-8164.18PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus][more]
gi|643735777|gb|KDP42285.1|4.6e-4651.23hypothetical protein JCGZ_01609 [Jatropha curcas][more]
gi|802563398|ref|XP_012066876.1|4.6e-4651.23PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas... [more]
gi|595791117|ref|XP_007199307.1|2.8e-4350.46hypothetical protein PRUPE_ppa023235mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:1901576 organic substance biosynthetic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G003580.1CmaCh16G003580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 112..123
score: 1.9E-12coord: 134..150
score: 1.9
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 111..168
score: 4.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 111..160
score: 1.9
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 111..174
score: 1.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 111..168
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 111..169
score: 1.11
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 69..184
score: 2.9
NoneNo IPR availablePANTHERPTHR31677:SF11SUBFAMILY NOT NAMEDcoord: 69..184
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G003580Cucsa.219890Cucumber (Gy14) v1cgycmaB0623
CmaCh16G003580Cucsa.244290Cucumber (Gy14) v1cgycmaB0685
CmaCh16G003580Cla016009Watermelon (97103) v1cmawmB324
CmaCh16G003580Cla013063Watermelon (97103) v1cmawmB317
CmaCh16G003580Csa3G207390Cucumber (Chinese Long) v2cmacuB320
CmaCh16G003580Csa7G073700Cucumber (Chinese Long) v2cmacuB348
CmaCh16G003580MELO3C007559Melon (DHL92) v3.5.1cmameB311
CmaCh16G003580MELO3C019506Melon (DHL92) v3.5.1cmameB298
CmaCh16G003580ClCG05G009970Watermelon (Charleston Gray)cmawcgB297
CmaCh16G003580ClCG02G005910Watermelon (Charleston Gray)cmawcgB293
CmaCh16G003580CSPI03G18550Wild cucumber (PI 183967)cmacpiB326
CmaCh16G003580CSPI07G07670Wild cucumber (PI 183967)cmacpiB351
CmaCh16G003580CmoCh19G006240Cucurbita moschata (Rifu)cmacmoB329
CmaCh16G003580CmoCh04G005340Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G003580CmoCh11G013590Cucurbita moschata (Rifu)cmacmoB318
CmaCh16G003580CmoCh16G003830Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G003580Lsi03G004900Bottle gourd (USVL1VR-Ls)cmalsiB309
CmaCh16G003580Lsi05G002080Bottle gourd (USVL1VR-Ls)cmalsiB316
CmaCh16G003580Lsi01G009790Bottle gourd (USVL1VR-Ls)cmalsiB304
CmaCh16G003580Cp4.1LG14g04230Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G003580MELO3C007559.2Melon (DHL92) v3.6.1cmamedB363
CmaCh16G003580MELO3C019506.2Melon (DHL92) v3.6.1cmamedB346
CmaCh16G003580CsaV3_3G018600Cucumber (Chinese Long) v3cmacucB0373
CmaCh16G003580CsaV3_7G008630Cucumber (Chinese Long) v3cmacucB0414
CmaCh16G003580Cla97C05G092380Watermelon (97103) v2cmawmbB347
CmaCh16G003580Cla97C02G032880Watermelon (97103) v2cmawmbB342
CmaCh16G003580Bhi01G001253Wax gourdcmawgoB0438
CmaCh16G003580CsGy7G007230Cucumber (Gy14) v2cgybcmaB918
CmaCh16G003580CsGy3G018410Cucumber (Gy14) v2cgybcmaB332
CmaCh16G003580Carg08167Silver-seed gourdcarcmaB0526
CmaCh16G003580Carg11287Silver-seed gourdcarcmaB0924
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G003580CmaCh11G017540Cucurbita maxima (Rimu)cmacmaB135
CmaCh16G003580CmaCh19G006060Cucurbita maxima (Rimu)cmacmaB340
CmaCh16G003580CmaCh04G004940Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G003580Cucurbita maxima (Rimu)cmacmaB042
CmaCh16G003580Cucumber (Chinese Long) v2cmacuB331
CmaCh16G003580Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G003580Cucumber (Chinese Long) v3cmacucB0386