CmaCh04G004940 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G004940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor 10
LocationCma_Chr04 : 2534801 .. 2535646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCTATCTCCGCAGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGATAATAGGTTTTGGCACGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGTGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAAACATGTAGCGTTTGTCGAATTGACGGTTGTTTAGGCTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGGTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAGGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATAATTCGTTGAGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAAATGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG

mRNA sequence

ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCTATCTCCGCAGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGATAATAGGTTTTGGCACGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGTGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAAACATGTAGCGTTTGTCGAATTGACGGTTGTTTAGGCTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGGTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAGGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATAATTCGTTGAGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAAATGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG

Coding sequence (CDS)

ATGTCCTCTCTCAAGCGATCTCGATCCACTGAATTTTCGGAATCCTATTTCTCTCTTCCGCCGCCCTATCTCCGCCCTATCTCCGCAGATCAGGAGCTCTCTGTTATCGTCACGGCGCTAACTTCTGTTGTCTCAGGGACGGCCTTCGATTCCGATTTCATGGATAATAGGTTTTGGCACGATTTTCAAATTCCGCCGCCTACATTTGATTGCGCAACCTCCGTGGCTTCTGCTTCTGCTTCCGATTCCTTCTCTGTCTCCGGAACTACTTCTTCCATCAGTTGTTCCAGTACCGACGCCATTTTAGGTCCCTCTGTTTTCGAAACATGTAGCGTTTGTCGAATTGACGGTTGTTTAGGCTGCGATTTCTTTCCGCCGTCGTCTCAAGTCGATAACGAGAAGAAGAGCGGCAAAAGACGGTCGAAGAAGACTTACAGAGGCGTAAGGCAACGACCTTGGGGAAAATGGGCCGCCGAGATCCGAAACCCGAAACTCGCGACCCGAGTCTGGTTAGGGACGTTCAATACAGCCGAAGAGGCCGCTAGGGCTTACGATAAGGCAGCTTGGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATAATTCGTTGAGAATGATGAGTTCGGAGCAACAAGAACAGAGACCGGAAAATGAAATGTCGAAGAACAGTAGCAATTCGACGGCGGCAACGGCGGCAATTGGAGTCGGAAATGATGATGAAATTTGGGGGAAGATTGCGAAGGATGAAGCAGATCAATGGATGTCGTCGTTGATGACGTATCACGGCGGCGAGTCGCCGGACTCCGCCAGTACTGGAATTTGGGAATTCTCGTAG

Protein sequence

MSSLKRSRSTEFSESYFSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCATSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGIWEFS
Homology
[Close]
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.4e-30
Identity = 90/229 (39.30%), Postives = 123/229 (53.71%), Query Frame = 1 

Query: 86  VSGTTSSISC---SSTDAILGPSV----FETCSVCRIDGCLGCDFF-------------- 145
           +SG   +  C   SS   ++   +     +TC VCRI+GCLGC++F              
Sbjct: 41  ISGENETAPCQGFSSDSTVISAGMPRLDSDTCQVCRIEGCLGCNYFFAPNQRIEKNHQQE 100

Query: 146 --------------PPSSQVDNEKKSGKRRSKKT-YRGVRQRPWGKWAAEIRNPKLATRV 205
                         P + + +   K  KR++KK  YRGVRQRPWGK+AAEIR+PK ATRV
Sbjct: 101 EEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRV 160

Query: 206 WLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSN 265
           WLGTF TAE+AARAYD+AA  FRGPRAKLNFPF D      +S        +++   +S 
Sbjct: 161 WLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD-----YTSSVSSPVAADDIGAKASA 220

Query: 266 STAATAAIGVGNDDEIWGKIAKD-EADQWMS--SLMTYHGGESPDSAST 276
           S + +A   V  + E W     D   ++WM+   +M +  G+S DS +T
Sbjct: 221 SASVSATDSV--EAEQWNGGGGDCNMEEWMNMMMMMDFGNGDSSDSGNT 262

[Close]
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1 

Query: 127 SSQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDK 186
           SS +  ++KS  R+  + YRGVRQRPWGKWAAEIR+P  A RVWLGTF+TAEEAA AYDK
Sbjct: 54  SSSLTLQEKSNSRQ--RNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDK 113

Query: 187 AAWEFRGPRAKLNFP 202
           AA+EFRG +AKLNFP
Sbjct: 114 AAFEFRGHKAKLNFP 126

[Close]
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.6e-21
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 1 

Query: 132 NEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEF 191
           +E++ GKR  K  YRG+RQRPWGKWAAEIR+P    RVWLGTF TA+EAARAYD AA + 
Sbjct: 37  SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKI 96

Query: 192 RGPRAKLNFPFTD-----------NSLRMMSSEQQEQRPENEMS 225
           RG +AKLNFP T            N   ++S  Q E   E+ M+
Sbjct: 97  RGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMA 140

[Close]
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 4.7e-21
Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 1 

Query: 117 GCLGCDFFP-PSS--QVDN-----EKKSGK------RRSKKTYRGVRQRPWGKWAAEIRN 176
           G LG D  P PSS  +VD+     E+   K      R  K+ YRGVRQRPWGKWAAEIR+
Sbjct: 35  GWLGIDSAPIPSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRD 94

Query: 177 PKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFP 202
           P  A RVWLGTF+TAE AARAYD+AA  FRG +AKLNFP
Sbjct: 95  PHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

[Close]
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 1 

Query: 143 KTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFP 202
           K YRGVRQRPWGKWAAEIR+P  ATRVWLGTF TAE AARAYD AA  FRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of CmaCh04G004940 vs. TrEMBL
Match: A0A0A0L9A3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207390 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.4e-94
Identity = 198/291 (68.04%), Postives = 226/291 (77.66%), Query Frame = 1 

Query: 1   MSSLKRSRS----TEFSESY-FSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDF-M 60
           M+SLKRS S    ++  +SY FSLPPP    IS+DQELSVIVTALTSVVSGT+    + M
Sbjct: 1   MNSLKRSPSPSPSSQSPDSYHFSLPPP---SISSDQELSVIVTALTSVVSGTSSHLHYSM 60

Query: 61  DNRFWHDFQIPPPTFDCATSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCR 120
            + FW   Q P P+F           SDSFS S T SS + S+T  I  PSVFETC+VC+
Sbjct: 61  ADAFWRQNQTPLPSFH----------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQ 120

Query: 121 IDGCLGCDFFPPS----SQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVW 180
           I GCLGC+FFPPS    SQ+ +EKK+  +RSKKTYRGVRQRPWGKWAAEIRNPKLATRVW
Sbjct: 121 IQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVW 180

Query: 181 LGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSNS 240
           LGTFNTAEEAARAYDKAA EFRGPRAKLNFPFTD+SLRMMSSE++ QR E+E+S+NSSNS
Sbjct: 181 LGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNS 240

Query: 241 TAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGIWEFS 282
               A IG+GN+DEIWGKIAKDE DQWMS+LMT HGG+S DSAS G WEFS
Sbjct: 241 ----AGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]
BLAST of CmaCh04G004940 vs. TrEMBL
Match: A0A067LCS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01609 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 8.8e-51
Identity = 121/249 (48.59%), Postives = 159/249 (63.86%), Query Frame = 1 

Query: 27  ISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCATSVASASASDSFSV 86
           ++ DQEL ++V+AL +VVSGT   +    + F H F     +   AT+VAS +      V
Sbjct: 6   LTQDQELFIMVSALKNVVSGTTSSTSVATDLF-HQFAAAASSSSPATAVASTA------V 65

Query: 87  SGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQVDNEKKSGKRRSKKTYR 146
           + TT S+     + I  PS  +TC++C+I GCLGC+FFPP+ +   EKK  ++R KK YR
Sbjct: 66  TTTTDSLY----NPIPPPSDLDTCNICKIKGCLGCNFFPPNQE---EKKGTRKRVKKNYR 125

Query: 147 GVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNS 206
           GVRQRPWGKWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA +FRGPRAKLNFPF DN+
Sbjct: 126 GVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAKLNFPFPDNT 185

Query: 207 LRMMSSEQQEQRPENEMSKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHG 266
               S+ + +  P+ +  K +         + VG + E W KI +DE  QWM+  M    
Sbjct: 186 ---ASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEIQQWMN--MMDFN 235

Query: 267 GESPDSAST 276
           G+S DS  T
Sbjct: 246 GDSSDSTGT 235

[Close]
BLAST of CmaCh04G004940 vs. TrEMBL
Match: A0A097LG53_9ROSA (EREBP-like factor OS=Prunus pseudocerasus GN=ERF2 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 127/271 (46.86%), Postives = 164/271 (60.52%), Query Frame = 1 

Query: 13  SESYFSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCA 72
           +E   SLPP   R ++ DQEL+VIV+AL +VV+GTA  +    N       + PP    A
Sbjct: 19  AEPPMSLPP---RRLTQDQELTVIVSALRNVVAGTATAASMDFN------SLLPPLQYAA 78

Query: 73  TSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQ--- 132
           TS   A+ S  +S             DA+L PS  +TC+VC+I GCLGC+FFPPS+Q   
Sbjct: 79  TSYPGATGSSCYS-------------DALLTPSDLDTCNVCKIKGCLGCNFFPPSAQEEK 138

Query: 133 VDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAW 192
            +N KK  K+R KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTF TAEEAARAYDKAA 
Sbjct: 139 ANNSKKGPKKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYDKAAI 198

Query: 193 EFRGPRAKLNFPFTDNSLRMMSSEQ----QEQRPENEMSKNSSNS--TAATAAIGVGNDD 252
           EFRGPRAKLNFPF D +L    +      Q  +P+  +++  +N+  +       +G + 
Sbjct: 199 EFRGPRAKLNFPFPDTTLLTQETNSAQPAQPAQPQQVVTEQETNNEFSREIEMTEIGKEK 258

Query: 253 EIWGKIAKDEADQWMSSLMTYHGGESPDSAS 275
           E W  I +DE   WM  +M +    S DS +
Sbjct: 259 EFWEIIGEDEIQHWM-RMMDFATDHSSDSGN 266

[Close]
BLAST of CmaCh04G004940 vs. TrEMBL
Match: A0A0M4KSE3_9ROSA (AP2/EREBP family transcription factor-like protein 11 OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.4e-50
Identity = 127/274 (46.35%), Postives = 164/274 (59.85%), Query Frame = 1 

Query: 13  SESYFSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCA 72
           +E   SLPP   R ++ DQEL+VIV+AL +VV+GTA  +    N       + PP    A
Sbjct: 19  AEPPMSLPP---RRLTQDQELTVIVSALRNVVAGTATAASMDFN------SLLPPLQYAA 78

Query: 73  TSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQ--- 132
           TS   A+ S  +S             DA+L PS  +TC+VC+I GCLGC+FFPPS+Q   
Sbjct: 79  TSYPGATGSSCYS-------------DALLTPSDLDTCNVCKIKGCLGCNFFPPSAQEEK 138

Query: 133 VDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAW 192
            +N KK  K+R KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTF TAEEAARAYDKAA 
Sbjct: 139 ANNSKKGPKKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYDKAAI 198

Query: 193 EFRGPRAKLNFPFTDNSLRMMSSEQ-------QEQRPENEMSKNSSNS--TAATAAIGVG 252
           EFRGPRAKLNFPF D +L    +         Q  +P+  +++  +N+  +       +G
Sbjct: 199 EFRGPRAKLNFPFPDTTLLTQETNSAQPAQPAQPAQPQQVVTEQETNNEFSREIEMTEIG 258

Query: 253 NDDEIWGKIAKDEADQWMSSLMTYHGGESPDSAS 275
            + E W  I +DE   WM  +M +    S DS +
Sbjct: 259 KEKEFWEIIGEDEIQHWM-RMMDFATDHSSDSGN 269

[Close]
BLAST of CmaCh04G004940 vs. TrEMBL
Match: V5NZC9_COFAR (Ethylene response factor 2 OS=Coffea arabica PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 125/300 (41.67%), Postives = 174/300 (58.00%), Query Frame = 1 

Query: 4   LKRSRSTEFSESYFSLPPPYLRPISADQELSVIVTALTSVVSG------TAFDSDFMDNR 63
           L  S +T         PPP  R I+++QE+SV+V AL +V++G      T   + + D  
Sbjct: 15  LTSSHATSILPPPLPPPPPPPRMITSEQEVSVMVAALKNVIAGSSTATTTTTATPYADAN 74

Query: 64  FWHDFQIPPPTF-DCATSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRID 123
             HDF++ PP+F +CAT+ +S+S+S +F           ++ + ++  +  +TC +C  +
Sbjct: 75  TLHDFRLFPPSFFECATASSSSSSSSAFF----------NANNLVVPAAAVQTCQLCGYE 134

Query: 124 GCLGCDFFPPSSQV--DNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTF 183
           GCLGC++F PS+    DN KK+G +R KK YRGVRQRPWGKWAAEIR+P+ A RVWLGTF
Sbjct: 135 GCLGCNYFSPSAAPVEDNNKKNGVKRKKKNYRGVRQRPWGKWAAEIRDPRKAARVWLGTF 194

Query: 184 NTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSL-RMMSSEQQEQRPENEM---------- 243
            TAE+AARAYD+AA EFRGPRAKLNFPF+D +L    SS   +Q PE +           
Sbjct: 195 ETAEDAARAYDRAAIEFRGPRAKLNFPFSDYTLDGHQSSSSSQQVPERDQHHHHHLPHKQ 254

Query: 244 ------SKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGI 278
                 +KN    T+    +G  N  E W  I ++E  QWM  +M    G S  S S  +
Sbjct: 255 LQPEIKAKNEIVDTSG-MELGTSNGMEFWEAIGEEEIQQWM--MMMDFQGHSSSSGSGNV 301

[Close]
BLAST of CmaCh04G004940 vs. TAIR10
Match: AT4G34410.1 (AT4G34410.1 redox responsive transcription factor 1)

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-31
Identity = 90/229 (39.30%), Postives = 123/229 (53.71%), Query Frame = 1 

Query: 86  VSGTTSSISC---SSTDAILGPSV----FETCSVCRIDGCLGCDFF-------------- 145
           +SG   +  C   SS   ++   +     +TC VCRI+GCLGC++F              
Sbjct: 41  ISGENETAPCQGFSSDSTVISAGMPRLDSDTCQVCRIEGCLGCNYFFAPNQRIEKNHQQE 100

Query: 146 --------------PPSSQVDNEKKSGKRRSKKT-YRGVRQRPWGKWAAEIRNPKLATRV 205
                         P + + +   K  KR++KK  YRGVRQRPWGK+AAEIR+PK ATRV
Sbjct: 101 EEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRV 160

Query: 206 WLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSN 265
           WLGTF TAE+AARAYD+AA  FRGPRAKLNFPF D      +S        +++   +S 
Sbjct: 161 WLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD-----YTSSVSSPVAADDIGAKASA 220

Query: 266 STAATAAIGVGNDDEIWGKIAKD-EADQWMS--SLMTYHGGESPDSAST 276
           S + +A   V  + E W     D   ++WM+   +M +  G+S DS +T
Sbjct: 221 SASVSATDSV--EAEQWNGGGGDCNMEEWMNMMMMMDFGNGDSSDSGNT 262

[Close]
BLAST of CmaCh04G004940 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1 

Query: 127 SSQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDK 186
           SS +  ++KS  R+  + YRGVRQRPWGKWAAEIR+P  A RVWLGTF+TAEEAA AYDK
Sbjct: 54  SSSLTLQEKSNSRQ--RNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDK 113

Query: 187 AAWEFRGPRAKLNFP 202
           AA+EFRG +AKLNFP
Sbjct: 114 AAFEFRGHKAKLNFP 126

[Close]
BLAST of CmaCh04G004940 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-22
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 1 

Query: 132 NEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEF 191
           +E++ GKR  K  YRG+RQRPWGKWAAEIR+P    RVWLGTF TA+EAARAYD AA + 
Sbjct: 37  SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKI 96

Query: 192 RGPRAKLNFPFTD-----------NSLRMMSSEQQEQRPENEMS 225
           RG +AKLNFP T            N   ++S  Q E   E+ M+
Sbjct: 97  RGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMA 140

[Close]
BLAST of CmaCh04G004940 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 1 

Query: 117 GCLGCDFFP-PSS--QVDN-----EKKSGK------RRSKKTYRGVRQRPWGKWAAEIRN 176
           G LG D  P PSS  +VD+     E+   K      R  K+ YRGVRQRPWGKWAAEIR+
Sbjct: 35  GWLGIDSAPIPSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRD 94

Query: 177 PKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFP 202
           P  A RVWLGTF+TAE AARAYD+AA  FRG +AKLNFP
Sbjct: 95  PHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

[Close]
BLAST of CmaCh04G004940 vs. TAIR10
Match: AT1G43160.1 (AT1G43160.1 related to AP2 6)

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 1 

Query: 143 KTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFP 202
           K YRGVRQRPWGKWAAEIR+P  ATRVWLGTF TAE AARAYD AA  FRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of CmaCh04G004940 vs. NCBI nr
Match: gi|659112224|ref|XP_008456122.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106
Identity = 214/285 (75.09%), Postives = 237/285 (83.16%), Query Frame = 1 

Query: 1   MSSLKRSRSTEFSESY-FSLPPPYLRP-ISADQELSVIVTALTSVVSGTAFDSDF-MDNR 60
           M+SLKRSRSTE  +S+ FSLPPPY RP IS DQELSVIVTALTSVVSGTA D  + M + 
Sbjct: 1   MNSLKRSRSTESPQSFHFSLPPPYFRPCISTDQELSVIVTALTSVVSGTASDLHYSMADG 60

Query: 61  FWHDFQIPPPTFDCATSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDG 120
           FW   Q PPP+FD       + ASDSFS S TTSS+S SSTDAI  PSVFETCSVC+I+G
Sbjct: 61  FWRQNQTPPPSFD-------SPASDSFSASATTSSLSSSSTDAIFSPSVFETCSVCQIEG 120

Query: 121 CLGCDFFPPSS-QVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNT 180
           CLGC+FFPPSS QV+ EKK G +RSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNT
Sbjct: 121 CLGCNFFPPSSSQVNVEKKIGNKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNT 180

Query: 181 AEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSNSTAATAA 240
           AEEAARAYDKAA EFRGPRAKLNFPFTD+SLRMMSSE++ QR ENE+S+N SNS+     
Sbjct: 181 AEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTENEISRNGSNSSGN--- 240

Query: 241 IGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGIWEFS 282
            G+GN+DEIWGKIAKDE DQWMS+LMT HGG+S DSAS G WEFS
Sbjct: 241 -GIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]
BLAST of CmaCh04G004940 vs. NCBI nr
Match: gi|449446085|ref|XP_004140802.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93
Identity = 198/291 (68.04%), Postives = 226/291 (77.66%), Query Frame = 1 

Query: 1   MSSLKRSRS----TEFSESY-FSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDF-M 60
           M+SLKRS S    ++  +SY FSLPPP    IS+DQELSVIVTALTSVVSGT+    + M
Sbjct: 1   MNSLKRSPSPSPSSQSPDSYHFSLPPP---SISSDQELSVIVTALTSVVSGTSSHLHYSM 60

Query: 61  DNRFWHDFQIPPPTFDCATSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCR 120
            + FW   Q P P+F           SDSFS S T SS + S+T  I  PSVFETC+VC+
Sbjct: 61  ADAFWRQNQTPLPSFH----------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQ 120

Query: 121 IDGCLGCDFFPPS----SQVDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVW 180
           I GCLGC+FFPPS    SQ+ +EKK+  +RSKKTYRGVRQRPWGKWAAEIRNPKLATRVW
Sbjct: 121 IQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVW 180

Query: 181 LGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNSLRMMSSEQQEQRPENEMSKNSSNS 240
           LGTFNTAEEAARAYDKAA EFRGPRAKLNFPFTD+SLRMMSSE++ QR E+E+S+NSSNS
Sbjct: 181 LGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNS 240

Query: 241 TAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHGGESPDSASTGIWEFS 282
               A IG+GN+DEIWGKIAKDE DQWMS+LMT HGG+S DSAS G WEFS
Sbjct: 241 ----AGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]
BLAST of CmaCh04G004940 vs. NCBI nr
Match: gi|802563398|ref|XP_012066876.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas])

HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52
Identity = 126/258 (48.84%), Postives = 164/258 (63.57%), Query Frame = 1 

Query: 19  LPPPYLRP-ISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCATSVAS 78
           LPP  L P ++ DQEL ++V+AL +VVSGT   +    + F H F     +   AT+VAS
Sbjct: 19  LPPAMLLPRLTQDQELFIMVSALKNVVSGTTSSTSVATDLF-HQFAAAASSSSPATAVAS 78

Query: 79  ASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQVDNEKKSG 138
            +      V+ TT S+     + I  PS  +TC++C+I GCLGC+FFPP+ +   EKK  
Sbjct: 79  TA------VTTTTDSLY----NPIPPPSDLDTCNICKIKGCLGCNFFPPNQE---EKKGT 138

Query: 139 KRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAK 198
           ++R KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA +FRGPRAK
Sbjct: 139 RKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAK 198

Query: 199 LNFPFTDNSLRMMSSEQQEQRPENEMSKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQW 258
           LNFPF DN+    S+ + +  P+ +  K +         + VG + E W KI +DE  QW
Sbjct: 199 LNFPFPDNT---ASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEIQQW 257

Query: 259 MSSLMTYHGGESPDSAST 276
           M+  M    G+S DS  T
Sbjct: 259 MN--MMDFNGDSSDSTGT 257

[Close]
BLAST of CmaCh04G004940 vs. NCBI nr
Match: gi|643735777|gb|KDP42285.1| (hypothetical protein JCGZ_01609 [Jatropha curcas])

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-50
Identity = 121/249 (48.59%), Postives = 159/249 (63.86%), Query Frame = 1 

Query: 27  ISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCATSVASASASDSFSV 86
           ++ DQEL ++V+AL +VVSGT   +    + F H F     +   AT+VAS +      V
Sbjct: 6   LTQDQELFIMVSALKNVVSGTTSSTSVATDLF-HQFAAAASSSSPATAVASTA------V 65

Query: 87  SGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQVDNEKKSGKRRSKKTYR 146
           + TT S+     + I  PS  +TC++C+I GCLGC+FFPP+ +   EKK  ++R KK YR
Sbjct: 66  TTTTDSLY----NPIPPPSDLDTCNICKIKGCLGCNFFPPNQE---EKKGTRKRVKKNYR 125

Query: 147 GVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRAKLNFPFTDNS 206
           GVRQRPWGKWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA +FRGPRAKLNFPF DN+
Sbjct: 126 GVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAKLNFPFPDNT 185

Query: 207 LRMMSSEQQEQRPENEMSKNSSNSTAATAAIGVGNDDEIWGKIAKDEADQWMSSLMTYHG 266
               S+ + +  P+ +  K +         + VG + E W KI +DE  QWM+  M    
Sbjct: 186 ---ASNLEGQSTPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEIQQWMN--MMDFN 235

Query: 267 GESPDSAST 276
           G+S DS  T
Sbjct: 246 GDSSDSTGT 235

[Close]
BLAST of CmaCh04G004940 vs. NCBI nr
Match: gi|698876304|gb|AIU05286.1| (EREBP-like factor [Prunus pseudocerasus])

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 127/271 (46.86%), Postives = 164/271 (60.52%), Query Frame = 1 

Query: 13  SESYFSLPPPYLRPISADQELSVIVTALTSVVSGTAFDSDFMDNRFWHDFQIPPPTFDCA 72
           +E   SLPP   R ++ DQEL+VIV+AL +VV+GTA  +    N       + PP    A
Sbjct: 19  AEPPMSLPP---RRLTQDQELTVIVSALRNVVAGTATAASMDFN------SLLPPLQYAA 78

Query: 73  TSVASASASDSFSVSGTTSSISCSSTDAILGPSVFETCSVCRIDGCLGCDFFPPSSQ--- 132
           TS   A+ S  +S             DA+L PS  +TC+VC+I GCLGC+FFPPS+Q   
Sbjct: 79  TSYPGATGSSCYS-------------DALLTPSDLDTCNVCKIKGCLGCNFFPPSAQEEK 138

Query: 133 VDNEKKSGKRRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAW 192
            +N KK  K+R KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTF TAEEAARAYDKAA 
Sbjct: 139 ANNSKKGPKKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYDKAAI 198

Query: 193 EFRGPRAKLNFPFTDNSLRMMSSEQ----QEQRPENEMSKNSSNS--TAATAAIGVGNDD 252
           EFRGPRAKLNFPF D +L    +      Q  +P+  +++  +N+  +       +G + 
Sbjct: 199 EFRGPRAKLNFPFPDTTLLTQETNSAQPAQPAQPQQVVTEQETNNEFSREIEMTEIGKEK 258

Query: 253 EIWGKIAKDEADQWMSSLMTYHGGESPDSAS 275
           E W  I +DE   WM  +M +    S DS +
Sbjct: 259 EFWEIIGEDEIQHWM-RMMDFATDHSSDSGN 266

The following BLAST results are available for this feature:
BLAST of CmaCh04G004940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF109_ARATH9.4e-3039.30Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF10... [more]
EF112_ARATH1.9e-2270.67Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF11... [more]
ERF71_ARATH3.6e-2152.88Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF07... [more]
EF110_ARATH4.7e-2160.61Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF11... [more]
RAP26_ARATH8.0e-2181.36Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-... [more]
BLAST of CmaCh04G004940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A3_CUCSA8.4e-9468.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207390 PE=4 SV=1[more]
A0A067LCS4_JATCU8.8e-5148.59Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01609 PE=4 SV=1[more]
A0A097LG53_9ROSA1.5e-5046.86EREBP-like factor OS=Prunus pseudocerasus GN=ERF2 PE=2 SV=1[more]
A0A0M4KSE3_9ROSA3.4e-5046.35AP2/EREBP family transcription factor-like protein 11 OS=Prunus pseudocerasus PE... [more]
V5NZC9_COFAR1.1e-4841.67Ethylene response factor 2 OS=Coffea arabica PE=2 SV=1[more]
BLAST of CmaCh04G004940 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34410.15.3e-3139.30 redox responsive transcription factor 1[more]
AT2G33710.21.1e-2370.67 Integrase-type DNA-binding superfamily protein[more]
AT2G47520.12.0e-2252.88 Integrase-type DNA-binding superfamily protein[more]
AT5G50080.12.6e-2260.61 ethylene response factor 110[more]
AT1G43160.14.5e-2281.36 related to AP2 6[more]
BLAST of CmaCh04G004940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112224|ref|XP_008456122.1|2.8e-10675.09PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo][more]
gi|449446085|ref|XP_004140802.1|1.2e-9368.04PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus][more]
gi|802563398|ref|XP_012066876.1|5.1e-5248.84PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas... [more]
gi|643735777|gb|KDP42285.1|1.3e-5048.59hypothetical protein JCGZ_01609 [Jatropha curcas][more]
gi|698876304|gb|AIU05286.1|2.2e-5046.86EREBP-like factor [Prunus pseudocerasus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:1901576 organic substance biosynthetic process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004940.1CmaCh04G004940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 145..156
score: 2.6E-12coord: 167..183
score: 2.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 144..201
score: 9.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 145..193
score: 3.5
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 144..207
score: 1.2
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 144..201
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 144..202
score: 5.69
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 3..218
score: 1.6
NoneNo IPR availablePANTHERPTHR31677:SF11SUBFAMILY NOT NAMEDcoord: 3..218
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G004940Cucsa.219890Cucumber (Gy14) v1cgycmaB0629
CmaCh04G004940Cucsa.244290Cucumber (Gy14) v1cgycmaB0687
CmaCh04G004940Cla016009Watermelon (97103) v1cmawmB725
CmaCh04G004940Cla013063Watermelon (97103) v1cmawmB703
CmaCh04G004940Csa3G207390Cucumber (Chinese Long) v2cmacuB697
CmaCh04G004940Csa7G073700Cucumber (Chinese Long) v2cmacuB776
CmaCh04G004940MELO3C007559Melon (DHL92) v3.5.1cmameB711
CmaCh04G004940MELO3C019506Melon (DHL92) v3.5.1cmameB691
CmaCh04G004940ClCG05G009970Watermelon (Charleston Gray)cmawcgB659
CmaCh04G004940ClCG02G005910Watermelon (Charleston Gray)cmawcgB643
CmaCh04G004940CSPI03G18550Wild cucumber (PI 183967)cmacpiB705
CmaCh04G004940CSPI07G07670Wild cucumber (PI 183967)cmacpiB786
CmaCh04G004940CmoCh19G006240Cucurbita moschata (Rifu)cmacmoB718
CmaCh04G004940CmoCh04G005340Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G004940CmoCh11G013590Cucurbita moschata (Rifu)cmacmoB678
CmaCh04G004940CmoCh16G003830Cucurbita moschata (Rifu)cmacmoB701
CmaCh04G004940Lsi05G002080Bottle gourd (USVL1VR-Ls)cmalsiB690
CmaCh04G004940Lsi03G004900Bottle gourd (USVL1VR-Ls)cmalsiB662
CmaCh04G004940Cp4.1LG14g04230Cucurbita pepo (Zucchini)cmacpeB715
CmaCh04G004940Cp4.1LG01g02220Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G004940MELO3C019506.2Melon (DHL92) v3.6.1cmamedB777
CmaCh04G004940CsaV3_3G018600Cucumber (Chinese Long) v3cmacucB0829
CmaCh04G004940CsaV3_7G008630Cucumber (Chinese Long) v3cmacucB0918
CmaCh04G004940Cla97C05G092380Watermelon (97103) v2cmawmbB763
CmaCh04G004940Cla97C02G032880Watermelon (97103) v2cmawmbB744
CmaCh04G004940Bhi01G001253Wax gourdcmawgoB0852
CmaCh04G004940CsGy3G018410Cucumber (Gy14) v2cgybcmaB410
CmaCh04G004940CsGy7G007230Cucumber (Gy14) v2cgybcmaB965
CmaCh04G004940Carg11287Silver-seed gourdcarcmaB0925
CmaCh04G004940Carg08167Silver-seed gourdcarcmaB0529
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G004940CmaCh11G017540Cucurbita maxima (Rimu)cmacmaB163
CmaCh04G004940CmaCh16G003580Cucurbita maxima (Rimu)cmacmaB351
CmaCh04G004940CmaCh19G006060Cucurbita maxima (Rimu)cmacmaB457
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G004940Melon (DHL92) v3.5.1cmameB672
CmaCh04G004940Cucurbita pepo (Zucchini)cmacpeB749
CmaCh04G004940Melon (DHL92) v3.6.1cmamedB754