CmoCh07G007230 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G007230
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor
LocationCmo_Chr07 : 3264028 .. 3264666 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCATTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTAACCCACACCCAGTACCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAATTATTTCCAAGACGGAAATTATAATCACAATCACAATCAAAATCAAAATCAAATTCAAATTCAAAATGTTGTGCCGGAAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGGAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGGAGAGAAACCCAAATTGGAAATCCAGGAATGA

mRNA sequence

ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCATTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTAACCCACACCCAGTACCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAATTATTTCCAAGACGGAAATTATAATCACAATCACAATCAAAATCAAAATCAAATTCAAATTCAAAATGTTGTGCCGGAAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGGAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGGAGAGAAACCCAAATTGGAAATCCAGGAATGA

Coding sequence (CDS)

ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCATTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTAACCCACACCCAGTACCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAATTATTTCCAAGACGGAAATTATAATCACAATCACAATCAAAATCAAAATCAAATTCAAATTCAAAATGTTGTGCCGGAAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGGAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGGAGAGAAACCCAAATTGGAAATCCAGGAATGA
Homology
[Close]
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.3e-35
Identity = 90/185 (48.65%), Postives = 113/185 (61.08%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIELWFPSGDTCEVCRI 77
           +L+ E+E S++VSAL HV+S          +   +    A +P ++      DTC+VCRI
Sbjct: 23  QLSPEQELSVIVSALQHVISGENETAPCQGFSSDSTVISAGMPRLD-----SDTCQVCRI 82

Query: 78  VGCLGCNYFQDGNYN--HNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGNKKRRMKR 137
            GCLGCNYF   N     NH Q +      N   E     K  +   KI    K++  K 
Sbjct: 83  EGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKI---RKRKNKKN 142

Query: 138 TFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPAS 197
            +RGVRQRPWGK+AAEIRDP+RATRVWLGTF+TAE AARAYDRAAI FRG +AKLNFP  
Sbjct: 143 GYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFV 199

Query: 198 DYQTT 201
           DY ++
Sbjct: 203 DYTSS 199

[Close]
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 1 

Query: 119 DEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDR 178
           D+   + +  K    +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFDTAE+AA AYD+
Sbjct: 52  DQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDK 111

Query: 179 AAIEFRGDKAKLNFP 194
           AA EFRG KAKLNFP
Sbjct: 112 AAFEFRGHKAKLNFP 126

[Close]
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 1 

Query: 135 RTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 194
           + +RGVRQRPWGKWAAEIRDP +ATRVWLGTF+TAE AARAYD AA+ FRG KAKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 7.1e-22
Identity = 58/85 (68.24%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 109 PEEEDEEKDQDEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDT 168
           P EE   K   EE         R  KR +RGVRQRPWGKWAAEIRDP RA RVWLGTFDT
Sbjct: 57  PIEESMSKAFPEEA--------REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDT 116

Query: 169 AEQAARAYDRAAIEFRGDKAKLNFP 194
           AE AARAYD AA+ FRG+KAKLNFP
Sbjct: 117 AEAAARAYDEAALRFRGNKAKLNFP 133

[Close]
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.1e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1 

Query: 134 KRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 193
           +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFD AE AARAYD AA+ FRG+KAKLNFP
Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241

[Close]
BLAST of CmoCh07G007230 vs. TrEMBL
Match: A0A0A0KJJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490860 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-45
Identity = 121/217 (55.76%), Postives = 142/217 (65.44%), Query Frame = 1 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLP 60
           MSG S DL +APF S  +L VEEE+SI+VSALT+V++D RIGL H        + +    
Sbjct: 1   MSGPSRDLVTAPFGS--RLGVEEENSIIVSALTYVLTDTRIGLDHND-----DYSNNHSG 60

Query: 61  AIELWFPSG-DTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQD 120
              LWFPS  D C+ C+   CLGCNYF+DGN     NQNQN +             KD+D
Sbjct: 61  TAVLWFPSANDECKKCQFANCLGCNYFEDGN-----NQNQNVV-------------KDED 120

Query: 121 EEEKIVVGNKKR---RMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAY 180
             +    GNKK+   +MK  FRGVR+R  GKWAAEIRDPRR  RVWLGTF TAE+AARAY
Sbjct: 121 NNDN---GNKKKGRKKMKGRFRGVRERRRGKWAAEIRDPRRRIRVWLGTFQTAEEAARAY 180

Query: 181 DRAAIEFR-GDKAKLNFPASDYQTTE--QGEK-PKLE 210
           DRAAIEFR GD+AKLNFPASDYQ  E  QG + P LE
Sbjct: 181 DRAAIEFRGGDRAKLNFPASDYQQNEIPQGNREPNLE 189

[Close]
BLAST of CmoCh07G007230 vs. TrEMBL
Match: A0A0C5AHM3_BETPL (ERF2 protein OS=Betula platyphylla GN=ERF2 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-37
Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIELWFPSGDTCEVCRI 77
           +L  E+E S+MV+ALT+VVS G    T +  +  A  D   LP  EL     DTC+VC+I
Sbjct: 8   RLTSEQELSVMVAALTNVVS-GCTSTTASTSEYCA--DATPLPPSEL-----DTCQVCKI 67

Query: 78  VGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGNKKRRMKRTF 137
            GCLGCN+F    +   H   +          E EDEEK    ++K  +G  KRR+K+ +
Sbjct: 68  DGCLGCNFF----FPPTHQDRR----------EVEDEEK----KKKPKLGVSKRRVKKNY 127

Query: 138 RGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASDY 197
           RGVRQRPWGKWAAEIRDPRRATRVWLGTF+TAE+AARAYD+AAI+FRG +AKLNFP  DY
Sbjct: 128 RGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAKLNFPFPDY 180

Query: 198 QTTE----QGEKPKLEIQE 213
              E    Q     LE QE
Sbjct: 188 APAETPNSQPSTTSLEQQE 180

[Close]
BLAST of CmoCh07G007230 vs. TrEMBL
Match: V4SBR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028930mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 95/212 (44.81%), Postives = 125/212 (58.96%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVV---SDGRIGLTHTQYQLLAAFDDAQLPAIELWF-------- 77
           +L  E+E +IMV+AL +VV   +D        ++Q   A + A + +    +        
Sbjct: 27  RLTQEQELAIMVAALENVVVGNTDNDFSTDIFRFQDWTASNAAAIASTSTSYNNHNTNFG 86

Query: 78  ----PSGDTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEE 137
               P  DTC+VC I GCLGCNYF   N ++ H Q Q Q             ++    ++
Sbjct: 87  NAMLPPADTCQVCNIQGCLGCNYFPPNNNHYPHQQQQPQ-------------QQQHQRQK 146

Query: 138 KIVVGNK---KRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRA 197
           K   G+    KRR K+ +RGVRQRPWGKWAAEIRDPRRATRVWLGTF+TAE+AARAYD+A
Sbjct: 147 KAAAGSSGAGKRRGKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKA 206

Query: 198 AIEFRGDKAKLNFP-------ASDYQTTEQGE 205
           A+EFRG +AKLNFP       A+ Y+  +QGE
Sbjct: 207 AVEFRGPRAKLNFPFPDSTTVATAYEQQQQGE 225

[Close]
BLAST of CmoCh07G007230 vs. TrEMBL
Match: A0A0D3DHN8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.7e-34
Identity = 92/191 (48.17%), Postives = 117/191 (61.26%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIELWFPSGDTCEVCRI 77
           +L+ E+E S++VSAL HV+S G      T YQ  ++        +       DTC+VCRI
Sbjct: 28  QLSPEQELSVIVSALQHVISGGN---DTTPYQGFSSNSTVISAGVH-----SDTCQVCRI 87

Query: 78  VGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGN--------K 137
            GCLGCNYF   N      +N+ Q+++     EE    K    E  + V          K
Sbjct: 88  DGCLGCNYFSAPN---QRIENKQQVEV-----EEGVTSKSSGRESTVAVTTAAATGKIRK 147

Query: 138 KRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAK 197
           ++  K  +RGVRQRPWGK+AAEIRDP+RATRVWLGTF+TAE AARAYDRAAI FRG +AK
Sbjct: 148 RKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAK 202

Query: 198 LNFPASDYQTT 201
           LNFP +DY +T
Sbjct: 208 LNFPFADYTST 202

[Close]
BLAST of CmoCh07G007230 vs. TrEMBL
Match: W9R7J5_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_002710 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 97/198 (48.99%), Postives = 117/198 (59.09%), Query Frame = 1 

Query: 13  FHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIE---LWFPSG 72
           F S+ +++ +EEHSIMVSAL HV+  G  G        +A    + +P+     L F   
Sbjct: 3   FRSSIRVSADEEHSIMVSALKHVIFGGGGGGGGGAADGIAM--SSSVPSANEAVLSFFEN 62

Query: 73  DTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGNK 132
           DTC  C I GCLGCN+F          Q    + ++       +  K           NK
Sbjct: 63  DTCRFCLINGCLGCNFFPP--------QENGGVLVKTTAGRACNGSKSSGRGSC----NK 122

Query: 133 KR--RMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDK 192
           ++  R K+ FRGVRQRPWGKWAAEIRDPRRA RVWLGTF TAEQAARAYDRAAIEFRG K
Sbjct: 123 RQSQRKKKDFRGVRQRPWGKWAAEIRDPRRAARVWLGTFATAEQAARAYDRAAIEFRGAK 182

Query: 193 AKLNFPASDYQ-TTEQGE 205
           AKLNFP SDY+   E G+
Sbjct: 183 AKLNFPMSDYKVVVENGD 186

[Close]
BLAST of CmoCh07G007230 vs. TAIR10
Match: AT4G34410.1 (AT4G34410.1 redox responsive transcription factor 1)

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-36
Identity = 90/185 (48.65%), Postives = 113/185 (61.08%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIELWFPSGDTCEVCRI 77
           +L+ E+E S++VSAL HV+S          +   +    A +P ++      DTC+VCRI
Sbjct: 23  QLSPEQELSVIVSALQHVISGENETAPCQGFSSDSTVISAGMPRLD-----SDTCQVCRI 82

Query: 78  VGCLGCNYFQDGNYN--HNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGNKKRRMKR 137
            GCLGCNYF   N     NH Q +      N   E     K  +   KI    K++  K 
Sbjct: 83  EGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKI---RKRKNKKN 142

Query: 138 TFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPAS 197
            +RGVRQRPWGK+AAEIRDP+RATRVWLGTF+TAE AARAYDRAAI FRG +AKLNFP  
Sbjct: 143 GYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFV 199

Query: 198 DYQTT 201
           DY ++
Sbjct: 203 DYTSS 199

[Close]
BLAST of CmoCh07G007230 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 1 

Query: 119 DEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDR 178
           D+   + +  K    +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFDTAE+AA AYD+
Sbjct: 52  DQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDK 111

Query: 179 AAIEFRGDKAKLNFP 194
           AA EFRG KAKLNFP
Sbjct: 112 AAFEFRGHKAKLNFP 126

[Close]
BLAST of CmoCh07G007230 vs. TAIR10
Match: AT1G43160.1 (AT1G43160.1 related to AP2 6)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 1 

Query: 135 RTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 194
           + +RGVRQRPWGKWAAEIRDP +ATRVWLGTF+TAE AARAYD AA+ FRG KAKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of CmoCh07G007230 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 58/85 (68.24%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 109 PEEEDEEKDQDEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDT 168
           P EE   K   EE         R  KR +RGVRQRPWGKWAAEIRDP RA RVWLGTFDT
Sbjct: 57  PIEESMSKAFPEEA--------REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDT 116

Query: 169 AEQAARAYDRAAIEFRGDKAKLNFP 194
           AE AARAYD AA+ FRG+KAKLNFP
Sbjct: 117 AEAAARAYDEAALRFRGNKAKLNFP 133

[Close]
BLAST of CmoCh07G007230 vs. TAIR10
Match: AT5G64750.1 (AT5G64750.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1 

Query: 134 KRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 193
           +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFD AE AARAYD AA+ FRG+KAKLNFP
Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241

[Close]
BLAST of CmoCh07G007230 vs. NCBI nr
Match: gi|659079476|ref|XP_008440277.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 3.6e-50
Identity = 126/221 (57.01%), Postives = 150/221 (67.87%), Query Frame = 1 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAF------ 60
           MSG SG+  +APF S  +L VEEE+SIMVSALTHV++D RIGLTH QYQLL +       
Sbjct: 1   MSGFSGNFVTAPFGS--RLGVEEENSIMVSALTHVLTDSRIGLTHAQYQLLFSSNLDHND 60

Query: 61  -DDAQLPAIELWFPSG-DTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEE 120
            D        LWFPS  D C+ C+  GCLGCNYF+DG+     NQNQN ++         
Sbjct: 61  DDSNNNSGNVLWFPSAMDECKKCQFAGCLGCNYFEDGS-----NQNQNVVK--------- 120

Query: 121 DEEKDQDEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQA 180
           DEE D   ++K     +++++K  FRGVRQR WGKWAAEIRDPRR  RVWLGTF TAE+A
Sbjct: 121 DEENDNKNKKK-----RRKKIKGRFRGVRQRRWGKWAAEIRDPRRKVRVWLGTFQTAEEA 180

Query: 181 ARAYDRAAIEFRG-DKAKLNFPASDYQTTE--QG-EKPKLE 210
           ARAYDRAAIEFRG  +AKLNFPASDYQ  +  QG  +P LE
Sbjct: 181 ARAYDRAAIEFRGIGRAKLNFPASDYQQNQIPQGYREPNLE 200

[Close]
BLAST of CmoCh07G007230 vs. NCBI nr
Match: gi|449448506|ref|XP_004142007.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 3.5e-45
Identity = 121/217 (55.76%), Postives = 142/217 (65.44%), Query Frame = 1 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLP 60
           MSG S DL +APF S  +L VEEE+SI+VSALT+V++D RIGL H        + +    
Sbjct: 1   MSGPSRDLVTAPFGS--RLGVEEENSIIVSALTYVLTDTRIGLDHND-----DYSNNHSG 60

Query: 61  AIELWFPSG-DTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQD 120
              LWFPS  D C+ C+   CLGCNYF+DGN     NQNQN +             KD+D
Sbjct: 61  TAVLWFPSANDECKKCQFANCLGCNYFEDGN-----NQNQNVV-------------KDED 120

Query: 121 EEEKIVVGNKKR---RMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAY 180
             +    GNKK+   +MK  FRGVR+R  GKWAAEIRDPRR  RVWLGTF TAE+AARAY
Sbjct: 121 NNDN---GNKKKGRKKMKGRFRGVRERRRGKWAAEIRDPRRRIRVWLGTFQTAEEAARAY 180

Query: 181 DRAAIEFR-GDKAKLNFPASDYQTTE--QGEK-PKLE 210
           DRAAIEFR GD+AKLNFPASDYQ  E  QG + P LE
Sbjct: 181 DRAAIEFRGGDRAKLNFPASDYQQNEIPQGNREPNLE 189

[Close]
BLAST of CmoCh07G007230 vs. NCBI nr
Match: gi|1009145088|ref|XP_015890142.1| (PREDICTED: ethylene-responsive transcription factor ERF109-like [Ziziphus jujuba])

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-39
Identity = 101/219 (46.12%), Postives = 121/219 (55.25%), Query Frame = 1 

Query: 5   SGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQ--LPA- 64
           + +L + PF    ++  ++EHSIMVSAL H +S G  G T  ++QLL A  +A   LP+ 
Sbjct: 10  TNNLTNMPF-PFIRIINDQEHSIMVSALKHEISGGMDGPTLEEFQLLEAVHNAMSSLPST 69

Query: 65  -------------IELWFPSGDTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVV 124
                        + L FP GD C  C I GCLGCN+F   + N                
Sbjct: 70  SGTNYDQKDQQQQVTLSFPDGDICPFCNINGCLGCNFFSTADCNDGKRGGS--------- 129

Query: 125 PEEEDEEKDQDEEEKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDT 184
                         K      KRR K  +RGVRQRPWGKWAAEIRDPRRA RVWLGTF+T
Sbjct: 130 --------------KTTASEAKRRKKNNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFET 189

Query: 185 AEQAARAYDRAAIEFRGDKAKLNFPASDYQTTEQGEKPK 208
           AEQAARAYD+AAIEFRG +AKLNFP SDY   +Q    K
Sbjct: 190 AEQAARAYDKAAIEFRGARAKLNFPLSDYHDEKQSTTDK 204

[Close]
BLAST of CmoCh07G007230 vs. NCBI nr
Match: gi|755257693|gb|AJK26922.1| (ethylene response factor protein 2 [Betula platyphylla])

HSP 1 Score: 163.3 bits (412), Expect = 4.6e-37
Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLPAIELWFPSGDTCEVCRI 77
           +L  E+E S+MV+ALT+VVS G    T +  +  A  D   LP  EL     DTC+VC+I
Sbjct: 8   RLTSEQELSVMVAALTNVVS-GCTSTTASTSEYCA--DATPLPPSEL-----DTCQVCKI 67

Query: 78  VGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEEKIVVGNKKRRMKRTF 137
            GCLGCN+F    +   H   +          E EDEEK    ++K  +G  KRR+K+ +
Sbjct: 68  DGCLGCNFF----FPPTHQDRR----------EVEDEEK----KKKPKLGVSKRRVKKNY 127

Query: 138 RGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASDY 197
           RGVRQRPWGKWAAEIRDPRRATRVWLGTF+TAE+AARAYD+AAI+FRG +AKLNFP  DY
Sbjct: 128 RGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAKLNFPFPDY 180

Query: 198 QTTE----QGEKPKLEIQE 213
              E    Q     LE QE
Sbjct: 188 APAETPNSQPSTTSLEQQE 180

[Close]
BLAST of CmoCh07G007230 vs. NCBI nr
Match: gi|568867559|ref|XP_006487104.1| (PREDICTED: ethylene-responsive transcription factor ERF109 [Citrus sinensis])

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 95/212 (44.81%), Postives = 125/212 (58.96%), Query Frame = 1 

Query: 18  KLAVEEEHSIMVSALTHVV---SDGRIGLTHTQYQLLAAFDDAQLPAIELWF-------- 77
           +L  E+E +IMV+AL +VV   +D        ++Q   A + A + +    +        
Sbjct: 27  RLTKEQELAIMVAALENVVVGNTDNDFSADIFRFQDWTASNAAAIASTSTSYNNYNTNFG 86

Query: 78  ----PSGDTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPEEEDEEKDQDEEE 137
               P  DTC+VC I GCLGCNYF   N ++ H Q Q Q             ++    ++
Sbjct: 87  NAMLPPADTCQVCNIQGCLGCNYFPPNNNHYAHQQQQPQ-------------QQQHQRQK 146

Query: 138 KIVVGNK---KRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRA 197
           K   G+    KRR K+ +RGVRQRPWGKWAAEIRDPRRATRVWLGTF+TAE+AARAYD+A
Sbjct: 147 KAAAGSSGAGKRRGKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKA 206

Query: 198 AIEFRGDKAKLNFP-------ASDYQTTEQGE 205
           A+EFRG +AKLNFP       A+ Y+  +QGE
Sbjct: 207 AVEFRGPRAKLNFPFPDSTTVATGYEQQQQGE 225

The following BLAST results are available for this feature:
BLAST of CmoCh07G007230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF109_ARATH7.3e-3548.65Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF10... [more]
EF112_ARATH3.8e-2368.00Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF11... [more]
RAP26_ARATH4.2e-2281.36Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-... [more]
EF110_ARATH7.1e-2268.24Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF11... [more]
ABR1_ARATH7.1e-2280.00Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE... [more]
BLAST of CmoCh07G007230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJJ4_CUCSA2.5e-4555.76Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490860 PE=4 SV=1[more]
A0A0C5AHM3_BETPL3.2e-3752.26ERF2 protein OS=Betula platyphylla GN=ERF2 PE=2 SV=1[more]
V4SBR5_9ROSI1.0e-3544.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028930mg PE=4 SV=1[more]
A0A0D3DHN8_BRAOL5.7e-3448.17Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
W9R7J5_9ROSA2.2e-3348.99Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_002710 PE=4 ... [more]
BLAST of CmoCh07G007230 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34410.14.1e-3648.65 redox responsive transcription factor 1[more]
AT2G33710.22.1e-2468.00 Integrase-type DNA-binding superfamily protein[more]
AT1G43160.12.4e-2381.36 related to AP2 6[more]
AT5G50080.14.0e-2368.24 ethylene response factor 110[more]
AT5G64750.14.0e-2380.00 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh07G007230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659079476|ref|XP_008440277.1|3.6e-5057.01PREDICTED: ethylene-responsive transcription factor ERF109-like [Cucumis melo][more]
gi|449448506|ref|XP_004142007.1|3.5e-4555.76PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus][more]
gi|1009145088|ref|XP_015890142.1|2.2e-3946.12PREDICTED: ethylene-responsive transcription factor ERF109-like [Ziziphus jujuba... [more]
gi|755257693|gb|AJK26922.1|4.6e-3752.26ethylene response factor protein 2 [Betula platyphylla][more]
gi|568867559|ref|XP_006487104.1|1.1e-3544.81PREDICTED: ethylene-responsive transcription factor ERF109 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G007230.1CmoCh07G007230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 137..148
score: 4.6E-12coord: 159..175
score: 4.6
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 136..194
score: 7.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 137..185
score: 1.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 136..199
score: 3.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 136..193
score: 24
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 136..195
score: 6.15
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 8..202
score: 1.0
NoneNo IPR availablePANTHERPTHR31677:SF11SUBFAMILY NOT NAMEDcoord: 8..202
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G007230Cucsa.102400Cucumber (Gy14) v1cgycmoB0233
CmoCh07G007230Cucsa.219890Cucumber (Gy14) v1cgycmoB0633
CmoCh07G007230CmaCh11G017540Cucurbita maxima (Rimu)cmacmoB161
CmoCh07G007230CmaCh19G006060Cucurbita maxima (Rimu)cmacmoB534
CmoCh07G007230CmaCh07G007090Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G007230Cla016009Watermelon (97103) v1cmowmB833
CmoCh07G007230Cla000714Watermelon (97103) v1cmowmB815
CmoCh07G007230Csa6G490860Cucumber (Chinese Long) v2cmocuB865
CmoCh07G007230MELO3C007559Melon (DHL92) v3.5.1cmomeB793
CmoCh07G007230ClCG01G016800Watermelon (Charleston Gray)cmowcgB755
CmoCh07G007230ClCG02G005910Watermelon (Charleston Gray)cmowcgB759
CmoCh07G007230CSPI07G07670Wild cucumber (PI 183967)cmocpiB877
CmoCh07G007230CSPI06G28090Wild cucumber (PI 183967)cmocpiB873
CmoCh07G007230Lsi01G009790Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G007230MELO3C007559.2Melon (DHL92) v3.6.1cmomedB896
CmoCh07G007230CsaV3_6G043230Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G007230CsaV3_7G008630Cucumber (Chinese Long) v3cmocucB1023
CmoCh07G007230Cla97C02G032880Watermelon (97103) v2cmowmbB856
CmoCh07G007230Cla97C01G015890Watermelon (97103) v2cmowmbB849
CmoCh07G007230Bhi03G001443Wax gourdcmowgoB1053
CmoCh07G007230Bhi05G000994Wax gourdcmowgoB1043
CmoCh07G007230CsGy7G007230Cucumber (Gy14) v2cgybcmoB954
CmoCh07G007230CsGy6G027530Cucumber (Gy14) v2cgybcmoB843
CmoCh07G007230Carg08167Silver-seed gourdcarcmoB0516
CmoCh07G007230Carg05222Silver-seed gourdcarcmoB1100
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G007230CmoCh11G013590Cucurbita moschata (Rifu)cmocmoB131
CmoCh07G007230CmoCh16G003830Cucurbita moschata (Rifu)cmocmoB296
CmoCh07G007230CmoCh19G006240Cucurbita moschata (Rifu)cmocmoB398
CmoCh07G007230CmoCh04G005340Cucurbita moschata (Rifu)cmocmoB477
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G007230Cucumber (Gy14) v2cgybcmoB543
CmoCh07G007230Melon (DHL92) v3.6.1cmomedB874
CmoCh07G007230Melon (DHL92) v3.6.1cmomedB885
CmoCh07G007230Silver-seed gourdcarcmoB0264
CmoCh07G007230Silver-seed gourdcarcmoB0554
CmoCh07G007230Cucumber (Chinese Long) v3cmocucB0991
CmoCh07G007230Cucurbita moschata (Rifu)cmocmoB037
CmoCh07G007230Cucurbita moschata (Rifu)cmocmoB376
CmoCh07G007230Cucurbita moschata (Rifu)cmocmoB455
CmoCh07G007230Cucumber (Gy14) v1cgycmoB1021
CmoCh07G007230Cucurbita maxima (Rimu)cmacmoB065
CmoCh07G007230Cucurbita maxima (Rimu)cmacmoB667
CmoCh07G007230Wild cucumber (PI 183967)cmocpiB849
CmoCh07G007230Cucumber (Chinese Long) v2cmocuB839
CmoCh07G007230Melon (DHL92) v3.5.1cmomeB770
CmoCh07G007230Melon (DHL92) v3.5.1cmomeB781
CmoCh07G007230Watermelon (Charleston Gray)cmowcgB756
CmoCh07G007230Watermelon (97103) v1cmowmB816
CmoCh07G007230Watermelon (97103) v1cmowmB831
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB820
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB806
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB809
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB822
CmoCh07G007230Cucurbita pepo (Zucchini)cmocpeB827
CmoCh07G007230Bottle gourd (USVL1VR-Ls)cmolsiB789