Carg05222 (gene) Silver-seed gourd

Overview
NameCarg05222
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_010 : 562747 .. 563385 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCACTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTATCCCACACCCAGTGCCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAACTATTTCCAAGACGGAAATTATAATCACAATCATAATCAAAATCAAAATCAAATTCAGATTCAAAATGTTGTGCCCGTAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGAAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGAAGAGAAACCCAAATTGGAAATCCAGGAATGA

mRNA sequence

ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCACTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTATCCCACACCCAGTGCCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAACTATTTCCAAGACGGAAATTATAATCACAATCATAATCAAAATCAAAATCAAATTCAGATTCAAAATGTTGTGCCCGTAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGAAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGAAGAGAAACCCAAATTGGAAATCCAGGAATGA

Coding sequence (CDS)

ATGTCTGGTTCTTCCGGAGATTTGGATTCTGCGCCGTTTCACTCGACGTGTAAATTAGCAGTTGAAGAGGAGCATTCGATCATGGTTTCGGCACTGACACACGTGGTCAGCGACGGCAGAATTGGGCTATCCCACACCCAGTGCCAGCTTCTAGCAGCTTTTGACGACGCTCAGCTTCCAGCTATTGAACTCTGGTTTCCCAGTGGCGACACGTGCGAGGTGTGCCGGATTGTTGGCTGCTTGGGATGCAACTATTTCCAAGACGGAAATTATAATCACAATCATAATCAAAATCAAAATCAAATTCAGATTCAAAATGTTGTGCCCGTAGAAGAAGATGAGGAGAAAGATCAAGATGAAGAGAAGAAAATAGTTGTGGGCAATAAGAAGAGAAGGATGAAGAGGACATTCAGGGGAGTGAGGCAGAGGCCTTGGGGGAAATGGGCAGCCGAGATTCGTGACCCGAGACGGGCCACCAGAGTGTGGCTAGGCACTTTCGACACAGCAGAGCAAGCGGCGAGGGCTTATGACAGAGCTGCCATTGAGTTCCGTGGAGATAAGGCCAAGCTCAACTTTCCTGCTTCAGACTACCAAACCACAGAGCAGGAAGAGAAACCCAAATTGGAAATCCAGGAATGA

Protein sequence

MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLPAIELWFPSGDTCEVCRIVGCLGCNYFQDGNYNHNHNQNQNQIQIQNVVPVEEDEEKDQDEEKKIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE
Homology
[Close]
BLAST of Carg05222 vs. NCBI nr
Match: XP_022963153.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 2.8e-91
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLP 60
           MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGL+HTQ QLLAAFDDAQLP
Sbjct: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLP 60

Query: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 180
           XXX VVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA
Sbjct: 121 XXXXVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 180

Query: 181 IEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE 213
           IEFRGDKAKLNFPASDYQTTEQ EKPKLEIQE
Sbjct: 181 IEFRGDKAKLNFPASDYQTTEQGEKPKLEIQE 212

[Close]
BLAST of Carg05222 vs. NCBI nr
Match: XP_023003418.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita maxima])

HSP 1 Score: 342.8 bits (878), Expect = 8.2e-91
Identity = 204/212 (96.23%), Postives = 206/212 (97.17%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLP 60
           MSGSSGDLDS PFHSTCKLAVEEEHSIMVSALTHVVSDGRIGL+HTQ QLLAAFDDAQLP
Sbjct: 1   MSGSSGDLDSVPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLP 60

Query: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AIELWFPSGDTCEVCRIVGCLGCNYFQDGN    XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGN----XXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 180
           XXXI+VGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA
Sbjct: 121 XXXIIVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 180

Query: 181 IEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE 213
           IEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE
Sbjct: 181 IEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE 208

[Close]
BLAST of Carg05222 vs. NCBI nr
Match: XP_023518712.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLP 60
           MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGL+HTQ QLLAAFDDAQLP
Sbjct: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLTHTQYQLLAAFDDAQLP 60

Query: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AIELWFPSGDTCEVCRIVGCLGCNYFQDGN  XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AIELWFPSGDTCEVCRIVGCLGCNYFQDGN--XXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 180
           XXX VVGNKKRRMKR FRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAE+AARAYDRAA
Sbjct: 121 XXXXVVGNKKRRMKRRFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEKAARAYDRAA 180

Query: 181 IEFRGDKAKLNFPASDYQTTEQEEKPKLEIQE 213
           IEFRGDKAKLNFPASDYQTTEQE+KPKLEIQE
Sbjct: 181 IEFRGDKAKLNFPASDYQTTEQEQKPKLEIQE 210

[Close]
BLAST of Carg05222 vs. NCBI nr
Match: XP_008440277.1 (PREDICTED: ethylene-responsive transcription factor ERF109-like [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41
Identity = 123/221 (55.66%), Postives = 141/221 (63.80%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFD----- 60
           MSG SG+  +APF S  +L VEEE+SIMVSALTHV++D RIGL+H Q QLL + +     
Sbjct: 1   MSGFSGNFVTAPFGS--RLGVEEENSIMVSALTHVLTDSRIGLTHAQYQLLFSSNLDHND 60

Query: 61  --DAQLPAIELWFPSG-DTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXX 120
                     LWFPS  D C+ C+  GCLGCNYF+DG+                    XX
Sbjct: 61  XXXXXXSGNVLWFPSAMDECKKCQFAGCLGCNYFEDGS-------------------NXX 120

Query: 121 XXXXXXXXXXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQA 180
           XXXXXXXXXXX             FRGVRQR WGKWAAEIRDPRR  RVWLGTF TAE+A
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXRFRGVRQRRWGKWAAEIRDPRRKVRVWLGTFQTAEEA 180

Query: 181 ARAYDRAAIEFRG-DKAKLNFPASDYQTTEQEE---KPKLE 210
           ARAYDRAAIEFRG  +AKLNFPASDYQ  +  +   +P LE
Sbjct: 181 ARAYDRAAIEFRGIGRAKLNFPASDYQQNQIPQGYREPNLE 200

[Close]
BLAST of Carg05222 vs. NCBI nr
Match: XP_004142007.1 (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus] >KGN48522.1 hypothetical protein Csa_6G490860 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 2.8e-38
Identity = 130/214 (60.75%), Postives = 146/214 (68.22%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLP 60
           MSG S DL +APF S  +L VEEE+SI+VSALT+V++D RIGL H        + +    
Sbjct: 1   MSGPSRDLVTAPFGS--RLGVEEENSIIVSALTYVLTDTRIGLDHND-----DYSNNHSG 60

Query: 61  AIELWFPS-GDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
              LWFPS  D C+ C+   CLGCNYF+DGN XXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  TAVLWFPSANDECKKCQFANCLGCNYFEDGNNXXXXXXXXXXXXXXXXXXXXXXXXXG-- 120

Query: 121 XXXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRA 180
                            FRGVR+R  GKWAAEIRDPRR  RVWLGTF TAE+AARAYDRA
Sbjct: 121 ----------------RFRGVRERRRGKWAAEIRDPRRRIRVWLGTFQTAEEAARAYDRA 180

Query: 181 AIEFR-GDKAKLNFPASDYQTTE---QEEKPKLE 210
           AIEFR GD+AKLNFPASDYQ  E      +P LE
Sbjct: 181 AIEFRGGDRAKLNFPASDYQQNEIPQGNREPNLE 189

[Close]
BLAST of Carg05222 vs. TAIR10
Match: AT4G34410.1 (redox responsive transcription factor 1)

HSP 1 Score: 135.6 bits (340), Expect = 3.6e-32
Identity = 111/184 (60.33%), Postives = 132/184 (71.74%), Query Frame = 0 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLSHT-QCQLLAAFDDAQLPAIELWFPSGDTCEVCR 77
           +L+ E+E S++VSAL HV+S    G + T  CQ  ++  D+ + +  +     DTC+VCR
Sbjct: 23  QLSPEQELSVIVSALQHVIS----GENETAPCQGFSS--DSTVISAGMPRLDSDTCQVCR 82

Query: 78  IVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVGNKKRRMKRT 137
           I GCLGCNYF   N     XXXXXXXXXXXXXXXXXXXXXXXXXXXX             
Sbjct: 83  IEGCLGCNYFFAPN-QRIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNG 142

Query: 138 FRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASD 197
           +RGVRQRPWGK+AAEIRDP+RATRVWLGTF+TAE AARAYDRAAI FRG +AKLNFP  D
Sbjct: 143 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 199

Query: 198 YQTT 201
           Y ++
Sbjct: 203 YTSS 199

[Close]
BLAST of Carg05222 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110)

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-25
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 131 RRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKL 190
           R  KR +RGVRQRPWGKWAAEIRDP RA RVWLGTFDTAE AARAYD AA+ FRG+KAKL
Sbjct: 71  REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKL 130

Query: 191 NFP 194
           NFP
Sbjct: 131 NFP 133

[Close]
BLAST of Carg05222 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24
Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 124 IVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEF 183
           + +  K    +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFDTAE+AA AYD+AA EF
Sbjct: 57  LTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEF 116

Query: 184 RGDKAKLNFP 194
           RG KAKLNFP
Sbjct: 117 RGHKAKLNFP 126

[Close]
BLAST of Carg05222 vs. TAIR10
Match: AT1G43160.1 (related to AP2 6)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 135 RTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 194
           + +RGVRQRPWGKWAAEIRDP +ATRVWLGTF+TAE AARAYD AA+ FRG KAKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of Carg05222 vs. TAIR10
Match: AT5G13330.1 (related to AP2 6l)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 134 KRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 193
           +R +RGVRQRPWGKWAAEIRDP++A RVWLGTF+TAE+AA AYDRAA++F+G KAKLNFP
Sbjct: 36  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95

[Close]
BLAST of Carg05222 vs. Swiss-Prot
Match: sp|Q9SZ06|EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-31
Identity = 111/184 (60.33%), Postives = 132/184 (71.74%), Query Frame = 0 

Query: 18  KLAVEEEHSIMVSALTHVVSDGRIGLSHT-QCQLLAAFDDAQLPAIELWFPSGDTCEVCR 77
           +L+ E+E S++VSAL HV+S    G + T  CQ  ++  D+ + +  +     DTC+VCR
Sbjct: 23  QLSPEQELSVIVSALQHVIS----GENETAPCQGFSS--DSTVISAGMPRLDSDTCQVCR 82

Query: 78  IVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVGNKKRRMKRT 137
           I GCLGCNYF   N     XXXXXXXXXXXXXXXXXXXXXXXXXXXX             
Sbjct: 83  IEGCLGCNYFFAPN-QRIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNG 142

Query: 138 FRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASD 197
           +RGVRQRPWGK+AAEIRDP+RATRVWLGTF+TAE AARAYDRAAI FRG +AKLNFP  D
Sbjct: 143 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 199

Query: 198 YQTT 201
           Y ++
Sbjct: 203 YTSS 199

[Close]
BLAST of Carg05222 vs. Swiss-Prot
Match: sp|Q70II3|EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 7.7e-24
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 131 RRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKL 190
           R  KR +RGVRQRPWGKWAAEIRDP RA RVWLGTFDTAE AARAYD AA+ FRG+KAKL
Sbjct: 71  REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKL 130

Query: 191 NFP 194
           NFP
Sbjct: 131 NFP 133

[Close]
BLAST of Carg05222 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-23
Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 124 IVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEF 183
           + +  K    +R +RGVRQRPWGKWAAEIRDP +A RVWLGTFDTAE+AA AYD+AA EF
Sbjct: 57  LTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEF 116

Query: 184 RGDKAKLNFP 194
           RG KAKLNFP
Sbjct: 117 RGHKAKLNFP 126

[Close]
BLAST of Carg05222 vs. Swiss-Prot
Match: sp|Q9LYU3|EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 134 KRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 193
           +R +RGVRQRPWGKWAAEIRDP++A RVWLGTF+TAE+AA AYDRAA++F+G KAKLNFP
Sbjct: 36  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95

[Close]
BLAST of Carg05222 vs. Swiss-Prot
Match: sp|Q7G1L2|RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 135 RTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFP 194
           + +RGVRQRPWGKWAAEIRDP +ATRVWLGTF+TAE AARAYD AA+ FRG KAKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]
BLAST of Carg05222 vs. TrEMBL
Match: tr|A0A1S3B0B5|A0A1S3B0B5_CUCME (ethylene-responsive transcription factor ERF109-like OS=Cucumis melo OX=3656 GN=LOC103484773 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 123/221 (55.66%), Postives = 141/221 (63.80%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFD----- 60
           MSG SG+  +APF S  +L VEEE+SIMVSALTHV++D RIGL+H Q QLL + +     
Sbjct: 1   MSGFSGNFVTAPFGS--RLGVEEENSIMVSALTHVLTDSRIGLTHAQYQLLFSSNLDHND 60

Query: 61  --DAQLPAIELWFPSG-DTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXX 120
                     LWFPS  D C+ C+  GCLGCNYF+DG+                    XX
Sbjct: 61  XXXXXXSGNVLWFPSAMDECKKCQFAGCLGCNYFEDGS-------------------NXX 120

Query: 121 XXXXXXXXXXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQA 180
           XXXXXXXXXXX             FRGVRQR WGKWAAEIRDPRR  RVWLGTF TAE+A
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXRFRGVRQRRWGKWAAEIRDPRRKVRVWLGTFQTAEEA 180

Query: 181 ARAYDRAAIEFRG-DKAKLNFPASDYQTTEQEE---KPKLE 210
           ARAYDRAAIEFRG  +AKLNFPASDYQ  +  +   +P LE
Sbjct: 181 ARAYDRAAIEFRGIGRAKLNFPASDYQQNQIPQGYREPNLE 200

[Close]
BLAST of Carg05222 vs. TrEMBL
Match: tr|A0A0A0KJJ4|A0A0A0KJJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490860 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 130/214 (60.75%), Postives = 146/214 (68.22%), Query Frame = 0 

Query: 1   MSGSSGDLDSAPFHSTCKLAVEEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAFDDAQLP 60
           MSG S DL +APF S  +L VEEE+SI+VSALT+V++D RIGL H        + +    
Sbjct: 1   MSGPSRDLVTAPFGS--RLGVEEENSIIVSALTYVLTDTRIGLDHND-----DYSNNHSG 60

Query: 61  AIELWFPS-GDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
              LWFPS  D C+ C+   CLGCNYF+DGN XXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  TAVLWFPSANDECKKCQFANCLGCNYFEDGNNXXXXXXXXXXXXXXXXXXXXXXXXXG-- 120

Query: 121 XXXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRA 180
                            FRGVR+R  GKWAAEIRDPRR  RVWLGTF TAE+AARAYDRA
Sbjct: 121 ----------------RFRGVRERRRGKWAAEIRDPRRRIRVWLGTFQTAEEAARAYDRA 180

Query: 181 AIEFR-GDKAKLNFPASDYQTTE---QEEKPKLE 210
           AIEFR GD+AKLNFPASDYQ  E      +P LE
Sbjct: 181 AIEFRGGDRAKLNFPASDYQQNEIPQGNREPNLE 189

[Close]
BLAST of Carg05222 vs. TrEMBL
Match: tr|A0A2P5FYB5|A0A2P5FYB5_9ROSA (AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF21 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34
Identity = 94/205 (45.85%), Postives = 110/205 (53.66%), Query Frame = 0 

Query: 18  KLAVEEEHSIMVSALTHVVS---DGRIGLS------------HTQCQLLAAFDDA--QLP 77
           +++V+EEHSIMVSAL HV+S   D  +G +             +Q Q L +   A     
Sbjct: 35  RVSVDEEHSIMVSALEHVISGEIDSIVGPTTKAQQQKQQDSYSSQVQPLRSATSAISSTG 94

Query: 78  AIELWFPSGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 137
              L FP  DTC VC I GCLGCN+F   N                              
Sbjct: 95  GNVLSFPDTDTCRVCEINGCLGCNFFPPSNERGGLAAVANTASFPKSTSFAKTRASNDND 154

Query: 138 XXXIVVGNKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAA 197
                 G         +RGVRQRPWGKWAAEIRDPRRA RVWLGTF+TAEQAARAYDRAA
Sbjct: 155 ------GXXXXXXXXNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFETAEQAARAYDRAA 214

Query: 198 IEFRGDKAKLNFPASDYQTTEQEEK 206
           IEFRG KAKLNFP SDY    ++++
Sbjct: 215 IEFRGSKAKLNFPMSDYNDGNRDDQ 233

[Close]
BLAST of Carg05222 vs. TrEMBL
Match: tr|A0A2P5ATD7|A0A2P5ATD7_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF21 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34
Identity = 93/198 (46.97%), Postives = 106/198 (53.54%), Query Frame = 0 

Query: 18  KLAVEEEHSIMVSALTHVVS---DGRIG-----LSHTQCQLLAAFDDA--QLPAIELWFP 77
           +++V+EEHSIMVSAL HV+S   D  +G        +Q Q L     A        L FP
Sbjct: 35  RVSVDEEHSIMVSALKHVISGQIDSIVGPTTKAQQPSQAQPLRNATSAVYSTGGNVLSFP 94

Query: 78  SGDTCEVCRIVGCLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVG 137
             DTC VC I GCLGCN+F   N                                     
Sbjct: 95  DADTCRVCEINGCLGCNFFPPSNERGELAAVANTSSFPKTTSFAKTRASNDND------X 154

Query: 138 NKKRRMKRTFRGVRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDK 197
                    +RGVRQRPWGKWAAEIRDPRRA RVWLGTF+TAE AARAYDRAAIEFRG K
Sbjct: 155 XXXXXXXXNYRGVRQRPWGKWAAEIRDPRRAARVWLGTFETAEHAARAYDRAAIEFRGSK 214

Query: 198 AKLNFPASDYQTTEQEEK 206
           AKLNFP SDY    ++E+
Sbjct: 215 AKLNFPMSDYNNGNRDEQ 226

[Close]
BLAST of Carg05222 vs. TrEMBL
Match: tr|A0A2I0HPB6|A0A2I0HPB6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_046111 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 85/187 (45.45%), Postives = 110/187 (58.82%), Query Frame = 0 

Query: 22  EEEHSIMVSALTHVVSDGRIGLSHTQCQLLAAF-DDAQLPAIEL-WFPSGDTCEVCRIVG 81
           E+E S++VSALT VV       + T  Q  ++F  +  + A+ + W P+  TC  C I G
Sbjct: 29  EQELSVIVSALTRVVCGTSTSTNTTAMQEYSSFHPNGNVLAVTVPWGPA--TCRTCNIEG 88

Query: 82  CLGCNYFQDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVGNKKRRMKRTFRG 141
           CLGC +F   +                                     NK++R K+ +RG
Sbjct: 89  CLGCEFFPQPSPAREGQAPQDNKGGD--------------------CSNKRKRAKKKYRG 148

Query: 142 VRQRPWGKWAAEIRDPRRATRVWLGTFDTAEQAARAYDRAAIEFRGDKAKLNFPASDYQT 201
           VRQRPWGKWAAEIRDPRRATRVWLGTF TAE AARAYDRAA+EFRG +AKLNFP +DY +
Sbjct: 149 VRQRPWGKWAAEIRDPRRATRVWLGTFSTAEDAARAYDRAAVEFRGPRAKLNFPEADYSS 193

Query: 202 TEQEEKP 207
            +++E+P
Sbjct: 209 VDRQERP 193

The following BLAST results are available for this feature:
BLAST of Carg05222 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963153.12.8e-9198.11ethylene-responsive transcription factor ERF109-like [Cucurbita moschata][more]
XP_023003418.18.2e-9196.23ethylene-responsive transcription factor ERF109-like [Cucurbita maxima][more]
XP_023518712.12.7e-8996.23ethylene-responsive transcription factor ERF109-like [Cucurbita pepo subsp. pepo... [more]
XP_008440277.12.1e-4155.66PREDICTED: ethylene-responsive transcription factor ERF109-like [Cucumis melo][more]
XP_004142007.12.8e-3860.75PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus] >KG... [more]
BLAST of Carg05222 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34410.13.6e-3260.33redox responsive transcription factor 1[more]
AT5G50080.14.3e-2582.54ethylene response factor 110[more]
AT2G33710.22.8e-2471.43Integrase-type DNA-binding superfamily protein[more]
AT1G43160.12.4e-2381.36related to AP2 6[more]
AT5G13330.12.4e-2378.33related to AP2 6l[more]
BLAST of Carg05222 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZ06|EF109_ARATH6.5e-3160.33Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q70II3|EF110_ARATH7.7e-2482.54Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P93007|EF112_ARATH5.0e-2371.43Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9LYU3|EF113_ARATH4.2e-2278.33Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q7G1L2|RAP26_ARATH4.2e-2281.36Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg05222 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B0B5|A0A1S3B0B5_CUCME1.4e-4155.66ethylene-responsive transcription factor ERF109-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0KJJ4|A0A0A0KJJ4_CUCSA1.8e-3860.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490860 PE=4 SV=1[more]
tr|A0A2P5FYB5|A0A2P5FYB5_9ROSA2.1e-3445.85AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF21 PE=4 SV=1[more]
tr|A0A2P5ATD7|A0A2P5ATD7_PARAD3.6e-3446.97AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF21 PE=4 S... [more]
tr|A0A2I0HPB6|A0A2I0HPB6_PUNGR4.7e-3445.45Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_046111 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05222-RACarg05222-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 137..148
score: 70.91
coord: 159..175
score: 73.26
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 136..199
e-value: 3.9E-38
score: 142.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 137..185
e-value: 2.3E-14
score: 53.3
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 136..193
score: 24.829
IPR001471AP2/ERF domainCDDcd00018AP2coord: 137..195
e-value: 5.60815E-33
score: 113.906
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 135..195
e-value: 8.3E-32
score: 110.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..212
NoneNo IPR availablePANTHERPTHR31190:SF41ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-RELATEDcoord: 15..207
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 15..207
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 136..195

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05222Cla000714Watermelon (97103) v1carwmB0804
Carg05222Cla016009Watermelon (97103) v1carwmB0812
Carg05222Csa7G073700Cucumber (Chinese Long) v2carcuB0827
Carg05222Csa6G490860Cucumber (Chinese Long) v2carcuB0826
Carg05222MELO3C007559Melon (DHL92) v3.5.1carmeB0807
Carg05222ClCG02G005910Watermelon (Charleston Gray)carwcgB0786
Carg05222ClCG01G016800Watermelon (Charleston Gray)carwcgB0778
Carg05222CSPI06G28090Wild cucumber (PI 183967)carcpiB0846
Carg05222CSPI07G07670Wild cucumber (PI 183967)carcpiB0849
Carg05222Cucsa.102400Cucumber (Gy14) v1carcgyB0918
Carg05222Cucsa.219890Cucumber (Gy14) v1carcgyB0920
Carg05222CmaCh19G006060Cucurbita maxima (Rimu)carcmaB1118
Carg05222CmaCh07G007090Cucurbita maxima (Rimu)carcmaB1130
Carg05222CmaCh11G017540Cucurbita maxima (Rimu)carcmaB1115
Carg05222CmoCh19G006240Cucurbita moschata (Rifu)carcmoB1089
Carg05222CmoCh07G007230Cucurbita moschata (Rifu)carcmoB1100
Carg05222Lsi01G009790Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05222CsGy6G027530Cucumber (Gy14) v2carcgybB0799
Carg05222CsGy7G007230Cucumber (Gy14) v2carcgybB0800
Carg05222MELO3C007559.2Melon (DHL92) v3.6.1carmedB0818
Carg05222CsaV3_7G008630Cucumber (Chinese Long) v3carcucB0852
Carg05222CsaV3_6G043230Cucumber (Chinese Long) v3carcucB0849
Carg05222Cla97C01G015890Watermelon (97103) v2carwmbB0839
Carg05222Cla97C02G032880Watermelon (97103) v2carwmbB0846
Carg05222Bhi03G001443Wax gourdcarwgoB0944
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg05222Silver-seed gourdcarcarB225
Carg05222Silver-seed gourdcarcarB428
Carg05222Cucumber (Gy14) v2carcgybB0792
Carg05222Cucumber (Gy14) v1carcgyB0924
Carg05222Cucurbita maxima (Rimu)carcmaB1125
Carg05222Cucurbita moschata (Rifu)carcmoB1095
Carg05222Cucurbita pepo (Zucchini)carcpeB1128
Carg05222Cucurbita pepo (Zucchini)carcpeB1130
Carg05222Cucurbita pepo (Zucchini)carcpeB1135
Carg05222Cucurbita pepo (Zucchini)carcpeB1136
Carg05222Cucurbita pepo (Zucchini)carcpeB1140
Carg05222Cucumber (Chinese Long) v3carcucB0842
Carg05222Bottle gourd (USVL1VR-Ls)carlsiB738
Carg05222Melon (DHL92) v3.5.1carmeB0800
Carg05222Melon (DHL92) v3.6.1carmedB0812
Carg05222Watermelon (97103) v1carwmB0805