Carg08136 (gene) Silver-seed gourd

Overview
NameCarg08136
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein 7-like
LocationCucurbita_argyrosperma_scaffold_050 : 928038 .. 928604 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTCAAGGACAACAAATTGAAAAGTCGATATACAGTAACGGACAAGCTGATTCGAGTGAAGAAGAACGAGAGGCAACAGACGGCGTAGCAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAGGAAGAACAAGCAGCTTTTAGCTGAATCACAAAGCTCTGCAGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTGTTCTTCAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCATAAGAGAGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCACAAGATGATGACCCTGTTTGGTCTGCCAATCCATAATTCTATGATTAGATCACTTGGTGTTCAGCCACATTCACTTGTGCACAAACCAGGCAGGGAAGATACTGTTCTAGCAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGTTGGGGGATGCCATGGACTTGATGTGGCCGGGGAGCTTCCGCTTCACTCAACATCGAGTTCTCGAAAAGCCACCACCAATCGAACCGTTCCAGCTCGATCTGAATCTTCGACTTTAA

mRNA sequence

ATGATTTTTCAAGGACAACAAATTGAAAAGTCGATATACAGTAACGGACAAGCTGATTCGAGTGAAGAAGAACGAGAGGCAACAGACGGCGTAGCAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAGGAAGAACAAGCAGCTTTTAGCTGAATCACAAAGCTCTGCAGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTGTTCTTCAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCATAAGAGAGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCACAAGATGATGACCCTGTTTGGTCTGCCAATCCATAATTCTATGATTAGATCACTTGGTGTTCAGCCACATTCACTTGTGCACAAACCAGGCAGGGAAGATACTGTTCTAGCAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGTTGGGGGATGCCATGGACTTGATGTGGCCGGGGAGCTTCCGCTTCACTCAACATCGAGTTCTCGAAAAGCCACCACCAATCGAACCGTTCCAGCTCGATCTGAATCTTCGACTTTAA

Coding sequence (CDS)

ATGATTTTTCAAGGACAACAAATTGAAAAGTCGATATACAGTAACGGACAAGCTGATTCGAGTGAAGAAGAACGAGAGGCAACAGACGGCGTAGCAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAGGAAGAACAAGCAGCTTTTAGCTGAATCACAAAGCTCTGCAGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGGGTGTTCTTCAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCATAAGAGAGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCACAAGATGATGACCCTGTTTGGTCTGCCAATCCATAATTCTATGATTAGATCACTTGGTGTTCAGCCACATTCACTTGTGCACAAACCAGGCAGGGAAGATACTGTTCTAGCAGCAAGATTTAATCATGTCAAAACTGGTTCATGGGCACCTTTCATGTTGGGGGATGCCATGGACTTGATGTGGCCGGGGAGCTTCCGCTTCACTCAACATCGAGTTCTCGAAAAGCCACCACCAATCGAACCGTTCCAGCTCGATCTGAATCTTCGACTTTAA

Protein sequence

MIFQGQQIEKSIYSNGQADSSEEEREATDGVAALEWLDLSLGRKNKQLLAESQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLGVQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPPIEPFQLDLNLRL
Homology
[Close]
BLAST of Carg08136 vs. NCBI nr
Match: XP_022942380.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-97
Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQADSSEEEREAT---DGVAALEWLDLSLGRKNKQLLAESQSSAA 60
           MIFQGQQIE SI SNGQADSSEEEREAT   DGVAALEWLDLSLGRKNKQLLAESQSSAA
Sbjct: 1   MIFQGQQIETSINSNGQADSSEEEREATDQPDGVAALEWLDLSLGRKNKQLLAESQSSAA 60

Query: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120
           ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG
Sbjct: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPPI 180
           VQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPP I
Sbjct: 121 VQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPSI 180

Query: 181 EPFQLDLNLRL 189
           EPFQLDLNLRL
Sbjct: 181 EPFQLDLNLRL 191

[Close]
BLAST of Carg08136 vs. NCBI nr
Match: XP_022982886.1 (zinc finger protein 4-like [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 1.2e-96
Identity = 183/191 (95.81%), Postives = 186/191 (97.38%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQADSSEEEREAT---DGVAALEWLDLSLGRKNKQLLAESQSSAA 60
           MIFQGQQIEKSIYSNG+ADSSEEE+EAT   DGVAALEWLDLSLGRKNKQLLAESQSSAA
Sbjct: 1   MIFQGQQIEKSIYSNGRADSSEEEQEATDQPDGVAALEWLDLSLGRKNKQLLAESQSSAA 60

Query: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120
           ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG
Sbjct: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPPI 180
           VQPHSLVHKPGREDTVLAARFN+VKTGSWAPFMLGDAMDLMWPGSFRFTQHR LEKPPPI
Sbjct: 121 VQPHSLVHKPGREDTVLAARFNNVKTGSWAPFMLGDAMDLMWPGSFRFTQHRNLEKPPPI 180

Query: 181 EPFQLDLNLRL 189
           E FQLDLNLRL
Sbjct: 181 ELFQLDLNLRL 191

[Close]
BLAST of Carg08136 vs. NCBI nr
Match: XP_023531890.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.0 bits (837), Expect = 4.2e-86
Identity = 166/193 (86.01%), Postives = 169/193 (87.56%), Query Frame = 0 

Query: 1   MIFQGQQIEKS-----IYSNGQADSSEEEREATDGVAALEWLDLSLGRKNKQLLAESQSS 60
           MIFQGQQIE S                   +  DGVAALEWLDLSLGRKNKQLLAESQSS
Sbjct: 1   MIFQGQQIEMSXXXXXXXXXXXXXXXXXATDQPDGVAALEWLDLSLGRKNKQLLAESQSS 60

Query: 61  AAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRS 120
           AAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRS
Sbjct: 61  AAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRS 120

Query: 121 LGVQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPP 180
           LGVQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHR+L+KP 
Sbjct: 121 LGVQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRILDKPS 180

Query: 181 PIEPFQLDLNLRL 189
           PIEPF LDLNLRL
Sbjct: 181 PIEPFHLDLNLRL 193

[Close]
BLAST of Carg08136 vs. NCBI nr
Match: XP_022149328.1 (zinc finger protein 4-like [Momordica charantia])

HSP 1 Score: 300.4 bits (768), Expect = 4.2e-78
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQADSSEEE--REATD-GVAALEWLDLSLGRKNKQLLAESQSSAA 60
           MIFQG+QIE  I + GQ DS EEE  R+  D GV  LEWL LSLG  NKQLL ESQ SAA
Sbjct: 1   MIFQGEQIEPLIDNKGQGDSIEEEVARDQPDGGVGTLEWLSLSLG-SNKQLLTESQRSAA 60

Query: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120
           AS KTFSCNFCKRVF+SSQALGGHQNAHKRERSAARRHQA +MMTL GLPIHNSMIRSLG
Sbjct: 61  ASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPP-- 180
           VQPHSLVHKPGREDT + ARFNHVKTGSW PFMLGDAMDLMWPGSFRFTQH++L +PP  
Sbjct: 121 VQPHSLVHKPGREDTAIVARFNHVKTGSWTPFMLGDAMDLMWPGSFRFTQHQILPEPPPE 180

Query: 181 -PIEPFQLDLNLRL 189
            P EPF LDLNLRL
Sbjct: 181 TPSEPFMLDLNLRL 193

[Close]
BLAST of Carg08136 vs. NCBI nr
Match: XP_011651233.1 (PREDICTED: zinc finger protein 7-like [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_3G199020 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 145/207 (70.05%), Postives = 158/207 (76.33%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQ-------------ADSSEEEREATDGVAALEWLDLSLGRKNKQ 60
           MIFQG+QIE    + GQ                        DGV ALEWL LSLGR NKQ
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXQPDGVGALEWLSLSLGR-NKQ 60

Query: 61  LLAESQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLP 120
            L +SQ S AASTKTFSCNFCKR+F+SSQALGGHQNAHKRERSAARRHQAHKMMTL GLP
Sbjct: 61  PLNDSQRS-AASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLP 120

Query: 121 IHNSMIRSLGVQPHSLVHKPGREDTVLAARFNHVKTGSW-APFMLGDAMDLMWPGSFRFT 180
           IHNSM+RSLGVQPHSLVHKPGREDT + ARFNHVK GSW APFMLGDAMD MWPGSFRF 
Sbjct: 121 IHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFA 180

Query: 181 QHRVLEKP-----PPIEPFQLDLNLRL 189
           QH++L +P     PP+EPF+LDL+LRL
Sbjct: 181 QHQILPEPPPPREPPMEPFKLDLSLRL 205

[Close]
BLAST of Carg08136 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-16
Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 0 

Query: 59  STKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFG------------- 118
           S + FSCN+C+R F+SSQALGGHQNAHKRER+ A+R     +  +F              
Sbjct: 81  SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAAT 140

Query: 119 ------LPIHNS------MIRSLGVQPHSLVHKPG----REDTVL--AARFNHVKTGSWA 165
                 LP+H S        R+LG++ HS  H         +T++   ARFN    G+  
Sbjct: 141 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 200

[Close]
BLAST of Carg08136 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 7.2e-16
Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 0 

Query: 17  QADSSEEEREATDGV---AALEWLDLSLGRKNKQL-----------LAESQSSAAASTKT 76
           Q +   +++E  +G+     L   D S  + N++L                 S +   K 
Sbjct: 44  QEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKL 103

Query: 77  FSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFG-------LPIHNSMI-R 136
           FSCN+C+R F+SSQALGGHQNAHKRER+ A+R Q       FG       +P H     R
Sbjct: 104 FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNR 163

Query: 137 SLGVQPHSLVHKPGREDTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKP 176
           +LG+Q HS+ HKP   + V    +  +   S  P +   A+  +      +  H+++  P
Sbjct: 164 TLGIQAHSMSHKPSSYN-VYGGEYGQI-NWSRIPLVQQPAIAKLTSTENHYNHHQMMIAP 222

[Close]
BLAST of Carg08136 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 80.9 bits (198), Expect = 9.4e-16
Identity = 61/165 (36.97%), Postives = 81/165 (49.09%), Query Frame = 0 

Query: 17  QADSSEEEREATDGVAALEWLDLSLGRKNKQLL----------AESQSSAAASTKTFSCN 76
           ++D +  E  A+ G  A    DLS    N   L              +   A+ + FSCN
Sbjct: 3   ESDDASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCN 62

Query: 77  FCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFG--LPIHNSMIRSLGVQPHS-L 136
           +C+R F+SSQALGGHQNAHKRER+ A+R  A  M  +FG     +     SLG+Q HS L
Sbjct: 63  YCRRKFYSSQALGGHQNAHKRERTMAKR--AMHMGRMFGHHHRPYTYTSSSLGMQAHSGL 122

Query: 137 VHKPGREDTVLAARFNHV-KTGSWAPFML---GDAMDLMWPGSFR 165
           +H    +   L +RF+H    G+  P          D  WPGSFR
Sbjct: 123 LHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]
BLAST of Carg08136 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0 

Query: 58  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKM----------------- 117
           A  + FSCN+C+R F+SSQALGGHQNAHKRER+ A+R Q +KM                 
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 118 ---MTLFGLPIHNSMIR--SLGVQPHSLVHKP---GREDTVLAARF 139
               ++  LP+H S+    +LG+Q HS +HKP   GR+ T L+  F
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVF 168

[Close]
BLAST of Carg08136 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-14
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0 

Query: 52  SQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQ-AHKMMTLFG----- 111
           ++S+ +   K FSCN+C+R F+SSQALGGHQNAHKRER+ A+R Q      + FG     
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 112 --LPIHN--SMIRSLGVQPHSLVHK 127
             LP H   +  RSLG+Q HS+ HK
Sbjct: 110 SPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]
BLAST of Carg08136 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 4.5e-15
Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 0 

Query: 59  STKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFG------------- 118
           S + FSCN+C+R F+SSQALGGHQNAHKRER+ A+R     +  +F              
Sbjct: 81  SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAAT 140

Query: 119 ------LPIHNS------MIRSLGVQPHSLVHKPG----REDTVL--AARFNHVKTGSWA 165
                 LP+H S        R+LG++ HS  H         +T++   ARFN    G+  
Sbjct: 141 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 200

[Close]
BLAST of Carg08136 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-14
Identity = 61/165 (36.97%), Postives = 81/165 (49.09%), Query Frame = 0 

Query: 17  QADSSEEEREATDGVAALEWLDLSLGRKNKQLL----------AESQSSAAASTKTFSCN 76
           ++D +  E  A+ G  A    DLS    N   L              +   A+ + FSCN
Sbjct: 3   ESDDASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCN 62

Query: 77  FCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFG--LPIHNSMIRSLGVQPHS-L 136
           +C+R F+SSQALGGHQNAHKRER+ A+R  A  M  +FG     +     SLG+Q HS L
Sbjct: 63  YCRRKFYSSQALGGHQNAHKRERTMAKR--AMHMGRMFGHHHRPYTYTSSSLGMQAHSGL 122

Query: 137 VHKPGREDTVLAARFNHV-KTGSWAPFML---GDAMDLMWPGSFR 165
           +H    +   L +RF+H    G+  P          D  WPGSFR
Sbjct: 123 LHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]
BLAST of Carg08136 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0 

Query: 58  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKM----------------- 117
           A  + FSCN+C+R F+SSQALGGHQNAHKRER+ A+R Q +KM                 
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 118 ---MTLFGLPIHNSMIR--SLGVQPHSLVHKP---GREDTVLAARF 139
               ++  LP+H S+    +LG+Q HS +HKP   GR+ T L+  F
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVF 168

[Close]
BLAST of Carg08136 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0 

Query: 52  SQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQ-AHKMMTLFG----- 111
           ++S+ +   K FSCN+C+R F+SSQALGGHQNAHKRER+ A+R Q      + FG     
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 112 --LPIHN--SMIRSLGVQPHSLVHK 127
             LP H   +  RSLG+Q HS+ HK
Sbjct: 110 SPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]
BLAST of Carg08136 vs. Swiss-Prot
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-08
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 52 SQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRH 96
          S S+  AS + F C +C R F++SQALGGHQNAHKRER+AARR+
Sbjct: 27 SSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70

[Close]
BLAST of Carg08136 vs. TrEMBL
Match: tr|A0A0A0L948|A0A0A0L948_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-69
Identity = 145/207 (70.05%), Postives = 158/207 (76.33%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQ-------------ADSSEEEREATDGVAALEWLDLSLGRKNKQ 60
           MIFQG+QIE    + GQ                        DGV ALEWL LSLGR NKQ
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXQPDGVGALEWLSLSLGR-NKQ 60

Query: 61  LLAESQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLP 120
            L +SQ S AASTKTFSCNFCKR+F+SSQALGGHQNAHKRERSAARRHQAHKMMTL GLP
Sbjct: 61  PLNDSQRS-AASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLP 120

Query: 121 IHNSMIRSLGVQPHSLVHKPGREDTVLAARFNHVKTGSW-APFMLGDAMDLMWPGSFRFT 180
           IHNSM+RSLGVQPHSLVHKPGREDT + ARFNHVK GSW APFMLGDAMD MWPGSFRF 
Sbjct: 121 IHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFA 180

Query: 181 QHRVLEKP-----PPIEPFQLDLNLRL 189
           QH++L +P     PP+EPF+LDL+LRL
Sbjct: 181 QHQILPEPPPPREPPMEPFKLDLSLRL 205

[Close]
BLAST of Carg08136 vs. TrEMBL
Match: tr|A0A1S3C410|A0A1S3C410_CUCME (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.0e-69
Identity = 145/211 (68.72%), Postives = 157/211 (74.41%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQ-----------------ADSSEEEREATDGVAALEWLDLSLGR 60
           MIFQG+QIE    + GQ                            DGV ALEWL LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVGALEWLSLSLGR 60

Query: 61  KNKQLLAESQSSAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTL 120
            NKQ L +SQ S AASTKTFSCNFCKR+F+SSQALGGHQNAHKRERSAARRHQAHKMMTL
Sbjct: 61  -NKQPLNDSQRS-AASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTL 120

Query: 121 FGLPIHNSMIRSLGVQPHSLVHKPGREDTVLAARFNHVKTGSW-APFMLGDAMDLMWPGS 180
            GLPIHNSM+RSLGVQPHSLVHKPGREDT + ARFNHVK GSW APFMLGDA D MWPGS
Sbjct: 121 LGLPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGS 180

Query: 181 FRFTQHRVLEKP-----PPIEPFQLDLNLRL 189
           FRF QH++L +P     PP+EPF+LDLNLRL
Sbjct: 181 FRFAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]
BLAST of Carg08136 vs. TrEMBL
Match: tr|A0A2C9VJ79|A0A2C9VJ79_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G066600 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 104/197 (52.79%), Postives = 126/197 (63.96%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQADSSEEEREATDGVAAL----EWLDLSLGRKNKQLLA--ESQS 60
           MIF+ + IE +  +N   D       + + + A     EWL+LSL   +       +SQS
Sbjct: 1   MIFRDEAIETA--TNKHQDELRISSNSAERIEACNPGGEWLNLSLASNSVSTAGDYDSQS 60

Query: 61  SAAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIR 120
               S+K FSCNFC+R F+SSQALGGHQNAHKRER AARR  + +MMT+ GLP++  M R
Sbjct: 61  RPTTSSKVFSCNFCRRKFYSSQALGGHQNAHKRERGAARRFHSQRMMTMMGLPLNTPMSR 120

Query: 121 SLGVQPHSLVHKPGREDTVLAARFNHVKTG---SWAPFMLGDAMDLMWPGSFRFTQHRVL 180
           SLGV+PH LVHKP RE   LAARFN   TG   +W PFML DAMDLMWPGSFR       
Sbjct: 121 SLGVRPHGLVHKPNREGATLAARFNEANTGIGMAWVPFMLEDAMDLMWPGSFRLDSQP-- 180

Query: 181 EKPPPIEPFQLDLNLRL 189
            +PPP E  +LDLNLRL
Sbjct: 181 PEPPPSESLKLDLNLRL 193

[Close]
BLAST of Carg08136 vs. TrEMBL
Match: tr|A0A2I4F7Z6|A0A2I4F7Z6_9ROSI (zinc finger protein 4-like OS=Juglans regia OX=51240 GN=LOC108996358 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 108/195 (55.38%), Postives = 125/195 (64.10%), Query Frame = 0 

Query: 1   MIFQGQQIEKSIYSNGQAD---SSEEEREATDGVAALEWLDLSLGRKNKQLLAESQ-SSA 60
           MIFQG+  E  I    Q D   SS+   E T+     EWL+LSLGR       +S     
Sbjct: 1   MIFQGEATE-GIPDRRQGDQIISSDNNNEGTEYDNPGEWLNLSLGRNLLSTPGDSDPQQR 60

Query: 61  AASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSL 120
            ASTK FSCNFC R FFSSQALGGHQNAHKRER AA+R+Q+H+MM + GLPI+ SM RSL
Sbjct: 61  PASTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMAMMGLPINTSMARSL 120

Query: 121 GVQPHSLVHKPGREDTVLAARFNHVKTG---SWAPFMLGDAMDLMWPGSFRFTQHRVLEK 180
           GV+PHSLVHKP RE + + ARF   KTG   +  PF + D  DLMWPGSFR         
Sbjct: 121 GVRPHSLVHKPSRELSAIVARFTDAKTGFGMARMPFTMEDPTDLMWPGSFRMNPK---PS 180

Query: 181 PPPIEPFQLDLNLRL 189
            PP EP +LDLNLRL
Sbjct: 181 EPPSEPHKLDLNLRL 191

[Close]
BLAST of Carg08136 vs. TrEMBL
Match: tr|A0A2N9JAS5|A0A2N9JAS5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61423 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 96/171 (56.14%), Postives = 120/171 (70.18%), Query Frame = 0 

Query: 22  EEEREATDGVAALEWLDLSLGRKNKQLLAESQ-SSAAASTKTFSCNFCKRVFFSSQALGG 81
           +++ + T+     EWL+LSLG        +S+  +  ASTK FSCNFC R F+SSQALGG
Sbjct: 25  DDDNKGTEDDHPGEWLNLSLGSNLLSTAGDSEPQTKTASTKVFSCNFCMRKFYSSQALGG 84

Query: 82  HQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLGVQPHSLVHKPGREDTVLAARFNH 141
           HQNAHKRER AARR+Q+H+MMT+ GLPI+   +RSLGV+PH+LVHKP R+ T + ARFN 
Sbjct: 85  HQNAHKRERGAARRYQSHRMMTMMGLPINTPTVRSLGVRPHALVHKPNRDATTIVARFND 144

Query: 142 VKTG---SWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPPIEPFQLDLNLRL 189
             TG   +W PF + +AMD MWPGSFR      L KPP  EP +LDLNLRL
Sbjct: 145 ANTGFGMAWTPFTVEEAMDSMWPGSFRLDPQ--LPKPPS-EPDKLDLNLRL 192

The following BLAST results are available for this feature:
BLAST of Carg08136 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942380.11.1e-9796.86zinc finger protein 4-like [Cucurbita moschata][more]
XP_022982886.11.2e-9695.81zinc finger protein 4-like [Cucurbita maxima][more]
XP_023531890.14.2e-8686.01zinc finger protein 4-like [Cucurbita pepo subsp. pepo][more]
XP_022149328.14.2e-7879.90zinc finger protein 4-like [Momordica charantia][more]
XP_011651233.11.6e-6970.05PREDICTED: zinc finger protein 7-like [Cucumis sativus] >KGN57489.1 hypothetical... [more]
BLAST of Carg08136 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66140.12.5e-1637.68zinc finger protein 4[more]
AT5G10970.17.2e-1630.94C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G24625.19.4e-1636.97zinc finger protein 7[more]
AT1G80730.11.6e-1543.40zinc-finger protein 1[more]
AT5G25160.16.7e-1449.41zinc finger protein 3[more]
BLAST of Carg08136 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39263|ZFP4_ARATH4.5e-1537.68Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
sp|Q39266|ZFP7_ARATH1.7e-1436.97Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
sp|Q42485|ZFP1_ARATH2.9e-1443.40Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
sp|Q39262|ZFP3_ARATH1.2e-1249.41Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
sp|Q9FFX4|KNU_ARATH6.9e-0863.64Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1[more]
BLAST of Carg08136 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L948|A0A0A0L948_CUCSA1.0e-6970.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1[more]
tr|A0A1S3C410|A0A1S3C410_CUCME4.0e-6968.72zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1[more]
tr|A0A2C9VJ79|A0A2C9VJ79_MANES1.5e-4452.79Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G066600 PE=4 SV=... [more]
tr|A0A2I4F7Z6|A0A2I4F7Z6_9ROSI2.6e-4455.38zinc finger protein 4-like OS=Juglans regia OX=51240 GN=LOC108996358 PE=4 SV=1[more]
tr|A0A2N9JAS5|A0A2N9JAS5_FAGSY1.3e-4356.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61423 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08136-RACarg08136-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 42..104
e-value: 2.2E-6
score: 29.4
NoneNo IPR availablePANTHERPTHR26374:SF228SUBFAMILY NOT NAMEDcoord: 13..188
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 13..188
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 65..85
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 63..90
score: 11.115
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 60..90

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08136Cla013107Watermelon (97103) v1carwmB0371
Carg08136Cla016073Watermelon (97103) v1carwmB0375
Carg08136Csa6G492290Cucumber (Chinese Long) v2carcuB0409
Carg08136Csa7G071620Cucumber (Chinese Long) v2carcuB0410
Carg08136Csa3G199020Cucumber (Chinese Long) v2carcuB0400
Carg08136MELO3C007595Melon (DHL92) v3.5.1carmeB0386
Carg08136MELO3C018499Melon (DHL92) v3.5.1carmeB0377
Carg08136MELO3C019555Melon (DHL92) v3.5.1carmeB0380
Carg08136ClCG05G010390Watermelon (Charleston Gray)carwcgB0370
Carg08136ClCG02G006550Watermelon (Charleston Gray)carwcgB0368
Carg08136CSPI07G07090Wild cucumber (PI 183967)carcpiB0413
Carg08136CSPI03G18060Wild cucumber (PI 183967)carcpiB0405
Carg08136Cucsa.102810Cucumber (Gy14) v1carcgyB0433
Carg08136Cucsa.219370Cucumber (Gy14) v1carcgyB0434
Carg08136CmaCh19G005680Cucurbita maxima (Rimu)carcmaB0528
Carg08136CmaCh16G003360Cucurbita maxima (Rimu)carcmaB0526
Carg08136CmaCh04G004660Cucurbita maxima (Rimu)carcmaB0529
Carg08136CmoCh04G004970Cucurbita moschata (Rifu)carcmoB0514
Carg08136CmoCh19G005820Cucurbita moschata (Rifu)carcmoB0512
Carg08136Lsi03G005520Bottle gourd (USVL1VR-Ls)carlsiB342
Carg08136Lsi01G009370Bottle gourd (USVL1VR-Ls)carlsiB340
Carg08136Lsi05G002460Bottle gourd (USVL1VR-Ls)carlsiB346
Carg08136Cp4.1LG01g02380Cucurbita pepo (Zucchini)carcpeB0527
Carg08136CsGy6G027990Cucumber (Gy14) v2carcgybB0388
Carg08136MELO3C007595.2Melon (DHL92) v3.6.1carmedB0390
Carg08136MELO3C019555.2Melon (DHL92) v3.6.1carmedB0384
Carg08136MELO3C018499.2Melon (DHL92) v3.6.1carmedB0382
Carg08136CsaV3_7G008060Cucumber (Chinese Long) v3carcucB0412
Carg08136CsaV3_3G018110Cucumber (Chinese Long) v3carcucB0403
Carg08136Cla97C02G033550Watermelon (97103) v2carwmbB0394
Carg08136Cla97C05G092750Watermelon (97103) v2carwmbB0396
Carg08136Bhi01G001291Wax gourdcarwgoB0459
Carg08136Bhi03G000745Wax gourdcarwgoB0464
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg08136Carg19673Silver-seed gourdcarcarB324
Carg08136Carg00814Silver-seed gourdcarcarB401
Carg08136Carg16350Silver-seed gourdcarcarB402
The following block(s) are covering this gene:
GeneOrganismBlock
Carg08136Wax gourdcarwgoB0463
Carg08136Wax gourdcarwgoB0466
Carg08136Silver-seed gourdcarcarB217
Carg08136Cucumber (Gy14) v2carcgybB0380
Carg08136Cucumber (Gy14) v2carcgybB0389
Carg08136Cucurbita maxima (Rimu)carcmaB0525
Carg08136Cucurbita moschata (Rifu)carcmoB0508
Carg08136Cucurbita moschata (Rifu)carcmoB0509
Carg08136Cucurbita moschata (Rifu)carcmoB0516
Carg08136Cucurbita pepo (Zucchini)carcpeB0523
Carg08136Cucurbita pepo (Zucchini)carcpeB0529
Carg08136Watermelon (97103) v2carwmbB0399
Carg08136Watermelon (97103) v2carwmbB0401