CmoCh19G005820 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G005820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc finger protein 7, putative
LocationCmo_Chr19 : 6585661 .. 6586323 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTGCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCTCCGCCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG

mRNA sequence

ATGGAAGATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTGCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCTCCGCCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG

Coding sequence (CDS)

ATGGAAGATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTGCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCTCCGCCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG
Homology
[Close]
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 1 

Query: 69  SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 128
           S+   A  ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M M  +    + 
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR-----AMHMGRMFGHHHR 108

Query: 129 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLEDDFM 188
              +   SLG++ HS LL     +P         V+RF+      + +       +D   
Sbjct: 109 PYTYTSSSLGMQAHSGLLHHTLSQP------QPLVSRFHHQGYFGN-TVPLFFDYDDGGS 168

Query: 189 DITWPGSFRLNTQQQTEPPM---SEPLKLDLN 218
           D  WPGSFR   ++   P +   S    LDLN
Sbjct: 169 DFFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 22  PTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLMNKPSSSSAAATAKMFSC 81
           P + + N+S  +E   R   N S   NL  C   DD+ S  ++N+ ++S+     K+FSC
Sbjct: 13  PYQDSLNQSIEDEE--RDVHNSSHELNLIDC--IDDTTS--IVNESTTSTEQ---KLFSC 72

Query: 82  NYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM-----MGLPPLMNNAANFMVRS 141
           NYC R FYSSQALGGHQNAHKRER  A+R Q     A       G  PL  +      RS
Sbjct: 73  NYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRS 131

Query: 142 LGVRPHSL 145
           LG++ HS+
Sbjct: 133 LGIQAHSI 131

[Close]
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 1 

Query: 38  RGWLNLSLGGNLQPCNGTDDSDSQPLMN--KPSSSSAA---------ATAKMFSCNYCMR 97
           +G  +L LG  L    GT  S    L++  K SSSS +         A  ++FSCNYC R
Sbjct: 17  QGHQDLELGLTLLS-RGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQR 76

Query: 98  KFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 124
           KFYSSQALGGHQNAHKRER  A+R Q+ K M +  LP
Sbjct: 77  KFYSSQALGGHQNAHKRERTLAKRGQYYK-MTLSSLP 111

[Close]
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 1 

Query: 20  SSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQ---PLMNKPSSSSA---- 79
           SS +++  N S   E+     LNLSL  N    N  D   S    PL +   SS+     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 80  ----AATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 139
               + + ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M + G+ P   +
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR---AMRMGLAGVFPGRGS 134

Query: 140 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASA 176
           ++N+   +       L L        G G  + T  R  G    +SA
Sbjct: 135 SSNYAAAATAAALSCLPLH-------GSGNGNMTSFRTLGIRAHSSA 171

[Close]
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 55/168 (32.74%), Postives = 77/168 (45.83%), Query Frame = 1 

Query: 68  SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMN 127
           SSS+  A+ ++F C YC RKFY+SQALGGHQNAHKRER AARR     +  +   PP+++
Sbjct: 27  SSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR----NLGVLANSPPILD 86

Query: 128 NAANFMVRSLGVRPHSLLLQRP------NREPLGHGGSSATVARF---------YGAATS 187
           +   F+      RP+    Q P        EPL    +  T+  +         Y  A S
Sbjct: 87  DNNTFL------RPYPCFYQNPFQGSTSGNEPLQEQPTMMTMDGYDPFHPYPYVYPFALS 146

Query: 188 ASASAAAACTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
            + +      +E+D                       EPL LDL+L+L
Sbjct: 147 GNNNDGGNGVMEED-----------------------EPLDLDLSLRL 161

[Close]
BLAST of CmoCh19G005820 vs. TrEMBL
Match: A0A0A0K2Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071620 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.7e-62
Identity = 143/223 (64.13%), Postives = 166/223 (74.44%), Query Frame = 1 

Query: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDS 60
           MEDREE  +L    QK  ES+ T+INRN++ ANEN A+GWLNLSLGGN Q  N  D SDS
Sbjct: 2   MEDREETTKLR-DIQKADESNSTKINRNDTIANENLAKGWLNLSLGGNFQTLNDIDCSDS 61

Query: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120
           QPLMNK ++SS     KMFSC++CMRKFYSSQALGGHQNAHKRERGAARRYQFQ++M MM
Sbjct: 62  QPLMNKANNSSPT---KMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRLMTMM 121

Query: 121 GLPPLM-NNAAN-FMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAA 180
           GLPPL+ NNAAN  M++SLGV+PHS  L         HGGS+ATVARF     S     A
Sbjct: 122 GLPPLLVNNAANSTMLKSLGVKPHSFRLH-------SHGGSAATVARFENGTASIGRGTA 181

Query: 181 AACTLEDD-FMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
           ++C+LED+  M ITWPGSFRLNTQQ+TE      +KLDLNLKL
Sbjct: 182 SSCSLEDESLMHITWPGSFRLNTQQKTE----SSIKLDLNLKL 209

[Close]
BLAST of CmoCh19G005820 vs. TrEMBL
Match: A0A061E226_THECC (Zinc finger protein 7, putative OS=Theobroma cacao GN=TCM_007169 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-37
Identity = 114/221 (51.58%), Postives = 139/221 (62.90%), Query Frame = 1 

Query: 3   DREEAAELTATTQKPGESSPTRINR--NESTANENPARGWLNLSLGGN-LQPCNGTDDSD 62
           +REEAAE  + + K  + S  RIN   NE+   ENP   WLNL +GGN L    G  D  
Sbjct: 4   EREEAAEAGSISTK--QQSELRINEDINEAIEEENPG-DWLNLRVGGNSLSSTAGDSDPQ 63

Query: 63  SQPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM 122
           S+P+           +AK+FSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQ Q++M+M
Sbjct: 64  SRPV-----------SAKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSQRMMSM 123

Query: 123 MGLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAA 182
           MGLP          +RSLGVRPHS L+Q+ +R+       +A+VARF    T     AA 
Sbjct: 124 MGLP----------IRSLGVRPHS-LVQKTSRD------GAASVARFNDTYT-GFGMAAM 183

Query: 183 ACTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
            CT+ DD MD  WPGSFRL+   Q   P S+P KLDLNL+L
Sbjct: 184 HCTV-DDAMDFMWPGSFRLD--PQLPKPPSDPAKLDLNLRL 189

[Close]
BLAST of CmoCh19G005820 vs. TrEMBL
Match: A0A067LB32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16276 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-35
Identity = 109/216 (50.46%), Postives = 135/216 (62.50%), Query Frame = 1 

Query: 5   EEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLM 64
           EE +E+  T +   E   +  N NE     NP + WLNLSLG N     G  D+ S    
Sbjct: 6   EETSEIP-TNKNQEEIGISSNNSNEGIEEHNPGK-WLNLSLGANSLSTAGDYDTQS---- 65

Query: 65  NKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPP 124
            +P++SS     K+FSCN+C RKFYSSQALGGHQNAHKRERGAARRYQ Q++MAMMG P 
Sbjct: 66  -RPNNSS-----KIFSCNFCRRKFYSSQALGGHQNAHKRERGAARRYQSQRMMAMMGFP- 125

Query: 125 LMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLE 184
            MN + N   RSLGVRPH+ L+ +P+RE         TV+  +  A++          + 
Sbjct: 126 -MNTSIN---RSLGVRPHA-LVHKPSRE-------ETTVSARFNEASNMRFDTTWMPFML 185

Query: 185 DDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
           +D MD+ WPGSFRLN  QQ+EPP SE LKLDLNLKL
Sbjct: 186 EDAMDLMWPGSFRLN-PQQSEPP-SESLKLDLNLKL 194

[Close]
BLAST of CmoCh19G005820 vs. TrEMBL
Match: V4S6V1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029351mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-35
Identity = 101/195 (51.79%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 26  NRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLMNKPSSSSAAATAKMFSCNYCM 85
           N NE   ++NP   WLNL LGGN    +   DS ++P            TAK+FSCN+CM
Sbjct: 21  NNNEEIGDDNPGE-WLNLKLGGNSLSTSRDPDSPARP-----------TTAKVFSCNFCM 80

Query: 86  RKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFMVRSLGVRPHSLL 145
           RKF+SSQALGGHQNAHKRERGAA+RYQ Q++M MMGLP   N     MVRSLGVR HS L
Sbjct: 81  RKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTN-----MVRSLGVRAHS-L 140

Query: 146 LQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLEDDFMDITWPGSFRLNTQQQTE 205
           + +P+R+  G G      ARF  A T      A    + ++  D+ WPGSFRLN Q    
Sbjct: 141 VHKPSRDGAGVG------ARFNDADT--GFGMAWTPYVLEEATDVMWPGSFRLNLQLPEP 187

Query: 206 PPMSEPLKLDLNLKL 221
           PP  EPLKLDLNL+L
Sbjct: 201 PP--EPLKLDLNLRL 187

[Close]
BLAST of CmoCh19G005820 vs. TrEMBL
Match: F6H699_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00260 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.1e-35
Identity = 113/217 (52.07%), Postives = 137/217 (63.13%), Query Frame = 1 

Query: 6   EAAELTATTQKPGESSPTRINRN--ESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPL 65
           E AE +   Q+ G     RI+ N  E    +NP   WLNLSLG NL   +   DSD Q  
Sbjct: 6   EGAETSVNKQQGG----LRISENGDEGAEEDNPGE-WLNLSLGRNLP--STALDSDPQ-- 65

Query: 66  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 125
            ++P+SS      K+FSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQ  ++MAMMGLP
Sbjct: 66  -SRPTSS------KVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSHRMMAMMGLP 125

Query: 126 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTL 185
                  N  +RSLGVRPHS L+Q+PNR+       +A VARF  + T    +     TL
Sbjct: 126 ------MNTPIRSLGVRPHS-LVQKPNRD------GTAIVARFDDSNTGFGMT-WTPFTL 185

Query: 186 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
           E+  MD+ WPGS+RL  +QQ     SEPLKLDLNL+L
Sbjct: 186 EET-MDVMWPGSYRL--EQQPSEQTSEPLKLDLNLRL 189

[Close]
BLAST of CmoCh19G005820 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 1 

Query: 69  SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 128
           S+   A  ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M M  +    + 
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR-----AMHMGRMFGHHHR 108

Query: 129 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLEDDFM 188
              +   SLG++ HS LL     +P         V+RF+      + +       +D   
Sbjct: 109 PYTYTSSSLGMQAHSGLLHHTLSQP------QPLVSRFHHQGYFGN-TVPLFFDYDDGGS 168

Query: 189 DITWPGSFRLNTQQQTEPPM---SEPLKLDLN 218
           D  WPGSFR   ++   P +   S    LDLN
Sbjct: 169 DFFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]
BLAST of CmoCh19G005820 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 1 

Query: 69  SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP----- 128
           + S +   K+FSCNYC R FYSSQALGGHQNAHKRER  A+R Q     A  G P     
Sbjct: 94  NGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAP 153

Query: 129 -PLMNNAANFMVRSLGVRPHSL 145
            P     +N   R+LG++ HS+
Sbjct: 154 VPFHGQYSN---RTLGIQAHSM 172

[Close]
BLAST of CmoCh19G005820 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 22  PTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLMNKPSSSSAAATAKMFSC 81
           P + + N+S  +E   R   N S   NL  C   DD+ S  ++N+ ++S+     K+FSC
Sbjct: 13  PYQDSLNQSIEDEE--RDVHNSSHELNLIDC--IDDTTS--IVNESTTSTEQ---KLFSC 72

Query: 82  NYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM-----MGLPPLMNNAANFMVRS 141
           NYC R FYSSQALGGHQNAHKRER  A+R Q     A       G  PL  +      RS
Sbjct: 73  NYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRS 131

Query: 142 LGVRPHSL 145
           LG++ HS+
Sbjct: 133 LGIQAHSI 131

[Close]
BLAST of CmoCh19G005820 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 1 

Query: 38  RGWLNLSLGGNLQPCNGTDDSDSQPLMN--KPSSSSAA---------ATAKMFSCNYCMR 97
           +G  +L LG  L    GT  S    L++  K SSSS +         A  ++FSCNYC R
Sbjct: 17  QGHQDLELGLTLLS-RGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQR 76

Query: 98  KFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 124
           KFYSSQALGGHQNAHKRER  A+R Q+ K M +  LP
Sbjct: 77  KFYSSQALGGHQNAHKRERTLAKRGQYYK-MTLSSLP 111

[Close]
BLAST of CmoCh19G005820 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 1 

Query: 20  SSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQ---PLMNKPSSSSA---- 79
           SS +++  N S   E+     LNLSL  N    N  D   S    PL +   SS+     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 80  ----AATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 139
               + + ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M + G+ P   +
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR---AMRMGLAGVFPGRGS 134

Query: 140 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASA 176
           ++N+   +       L L        G G  + T  R  G    +SA
Sbjct: 135 SSNYAAAATAAALSCLPLH-------GSGNGNMTSFRTLGIRAHSSA 171

[Close]
BLAST of CmoCh19G005820 vs. NCBI nr
Match: gi|659110026|ref|XP_008455009.1| (PREDICTED: zinc finger protein 4-like [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 6.0e-64
Identity = 148/222 (66.67%), Postives = 165/222 (74.32%), Query Frame = 1 

Query: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDS 60
           MEDREE  +L    QK  ES+ TRINRN+S ANEN A+GWLNLSLGGN Q  N  D SDS
Sbjct: 1   MEDREETTKLR-DIQKADESNSTRINRNDSIANENLAKGWLNLSLGGNFQTSNDKDYSDS 60

Query: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120
           QPLMNK ++SSA    KMFSC++CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IM MM
Sbjct: 61  QPLMNKANNSSAT---KMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMTMM 120

Query: 121 GLPPLMNNAAN-FMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAA 180
           GLPP MNNAAN  M+RSLGVRPHSL L         HG S+ATVARF  A  +      A
Sbjct: 121 GLPPSMNNAANSIMLRSLGVRPHSLRLH-------SHGESAATVARFENATATIGRGTTA 180

Query: 181 ACTLEDD-FMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
            C+LED+  M ITWPGSFRLNTQ++TEP  +    LDLNLKL
Sbjct: 181 FCSLEDESLMHITWPGSFRLNTQRKTEPSTT----LDLNLKL 207

[Close]
BLAST of CmoCh19G005820 vs. NCBI nr
Match: gi|700188640|gb|KGN43873.1| (hypothetical protein Csa_7G071620 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 9.6e-62
Identity = 143/223 (64.13%), Postives = 166/223 (74.44%), Query Frame = 1 

Query: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDS 60
           MEDREE  +L    QK  ES+ T+INRN++ ANEN A+GWLNLSLGGN Q  N  D SDS
Sbjct: 2   MEDREETTKLR-DIQKADESNSTKINRNDTIANENLAKGWLNLSLGGNFQTLNDIDCSDS 61

Query: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120
           QPLMNK ++SS     KMFSC++CMRKFYSSQALGGHQNAHKRERGAARRYQFQ++M MM
Sbjct: 62  QPLMNKANNSSPT---KMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRLMTMM 121

Query: 121 GLPPLM-NNAAN-FMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAA 180
           GLPPL+ NNAAN  M++SLGV+PHS  L         HGGS+ATVARF     S     A
Sbjct: 122 GLPPLLVNNAANSTMLKSLGVKPHSFRLH-------SHGGSAATVARFENGTASIGRGTA 181

Query: 181 AACTLEDD-FMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
           ++C+LED+  M ITWPGSFRLNTQQ+TE      +KLDLNLKL
Sbjct: 182 SSCSLEDESLMHITWPGSFRLNTQQKTE----SSIKLDLNLKL 209

[Close]
BLAST of CmoCh19G005820 vs. NCBI nr
Match: gi|590687085|ref|XP_007042565.1| (Zinc finger protein 7, putative [Theobroma cacao])

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 114/221 (51.58%), Postives = 139/221 (62.90%), Query Frame = 1 

Query: 3   DREEAAELTATTQKPGESSPTRINR--NESTANENPARGWLNLSLGGN-LQPCNGTDDSD 62
           +REEAAE  + + K  + S  RIN   NE+   ENP   WLNL +GGN L    G  D  
Sbjct: 4   EREEAAEAGSISTK--QQSELRINEDINEAIEEENPG-DWLNLRVGGNSLSSTAGDSDPQ 63

Query: 63  SQPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM 122
           S+P+           +AK+FSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQ Q++M+M
Sbjct: 64  SRPV-----------SAKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSQRMMSM 123

Query: 123 MGLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAA 182
           MGLP          +RSLGVRPHS L+Q+ +R+       +A+VARF    T     AA 
Sbjct: 124 MGLP----------IRSLGVRPHS-LVQKTSRD------GAASVARFNDTYT-GFGMAAM 183

Query: 183 ACTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
            CT+ DD MD  WPGSFRL+   Q   P S+P KLDLNL+L
Sbjct: 184 HCTV-DDAMDFMWPGSFRLD--PQLPKPPSDPAKLDLNLRL 189

[Close]
BLAST of CmoCh19G005820 vs. NCBI nr
Match: gi|802550598|ref|XP_012093067.1| (PREDICTED: zinc finger protein 4-like [Jatropha curcas])

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35
Identity = 109/216 (50.46%), Postives = 135/216 (62.50%), Query Frame = 1 

Query: 5   EEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLM 64
           EE +E+  T +   E   +  N NE     NP + WLNLSLG N     G  D+ S    
Sbjct: 6   EETSEIP-TNKNQEEIGISSNNSNEGIEEHNPGK-WLNLSLGANSLSTAGDYDTQS---- 65

Query: 65  NKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPP 124
            +P++SS     K+FSCN+C RKFYSSQALGGHQNAHKRERGAARRYQ Q++MAMMG P 
Sbjct: 66  -RPNNSS-----KIFSCNFCRRKFYSSQALGGHQNAHKRERGAARRYQSQRMMAMMGFP- 125

Query: 125 LMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLE 184
            MN + N   RSLGVRPH+ L+ +P+RE         TV+  +  A++          + 
Sbjct: 126 -MNTSIN---RSLGVRPHA-LVHKPSRE-------ETTVSARFNEASNMRFDTTWMPFML 185

Query: 185 DDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 221
           +D MD+ WPGSFRLN  QQ+EPP SE LKLDLNLKL
Sbjct: 186 EDAMDLMWPGSFRLN-PQQSEPP-SESLKLDLNLKL 194

[Close]
BLAST of CmoCh19G005820 vs. NCBI nr
Match: gi|567860456|ref|XP_006422882.1| (hypothetical protein CICLE_v10029351mg [Citrus clementina])

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 101/195 (51.79%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 26  NRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPLMNKPSSSSAAATAKMFSCNYCM 85
           N NE   ++NP   WLNL LGGN    +   DS ++P            TAK+FSCN+CM
Sbjct: 21  NNNEEIGDDNPGE-WLNLKLGGNSLSTSRDPDSPARP-----------TTAKVFSCNFCM 80

Query: 86  RKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFMVRSLGVRPHSLL 145
           RKF+SSQALGGHQNAHKRERGAA+RYQ Q++M MMGLP   N     MVRSLGVR HS L
Sbjct: 81  RKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTN-----MVRSLGVRAHS-L 140

Query: 146 LQRPNREPLGHGGSSATVARFYGAATSASASAAAACTLEDDFMDITWPGSFRLNTQQQTE 205
           + +P+R+  G G      ARF  A T      A    + ++  D+ WPGSFRLN Q    
Sbjct: 141 VHKPSRDGAGVG------ARFNDADT--GFGMAWTPYVLEEATDVMWPGSFRLNLQLPEP 187

Query: 206 PPMSEPLKLDLNLKL 221
           PP  EPLKLDLNL+L
Sbjct: 201 PP--EPLKLDLNLRL 187

The following BLAST results are available for this feature:
BLAST of CmoCh19G005820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP7_ARATH1.8e-1237.50Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP3_ARATH1.3e-1042.19Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP1_ARATH1.3e-1049.48Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP4_ARATH5.0e-1035.33Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
KNU_ARATH1.4e-0932.74Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1[more]
BLAST of CmoCh19G005820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2Z6_CUCSA6.7e-6264.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071620 PE=4 SV=1[more]
A0A061E226_THECC2.5e-3751.58Zinc finger protein 7, putative OS=Theobroma cacao GN=TCM_007169 PE=4 SV=1[more]
A0A067LB32_JATCU1.8e-3550.46Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16276 PE=4 SV=1[more]
V4S6V1_9ROSI2.4e-3551.79Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029351mg PE=4 SV=1[more]
F6H699_VITVI4.1e-3552.07Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00260 PE=4 SV=... [more]
BLAST of CmoCh19G005820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24625.11.0e-1337.50 zinc finger protein 7[more]
AT5G10970.11.5e-1248.78 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G25160.17.4e-1242.19 zinc finger protein 3[more]
AT1G80730.17.4e-1249.48 zinc-finger protein 1[more]
AT1G66140.12.8e-1135.33 zinc finger protein 4[more]
BLAST of CmoCh19G005820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110026|ref|XP_008455009.1|6.0e-6466.67PREDICTED: zinc finger protein 4-like [Cucumis melo][more]
gi|700188640|gb|KGN43873.1|9.6e-6264.13hypothetical protein Csa_7G071620 [Cucumis sativus][more]
gi|590687085|ref|XP_007042565.1|3.7e-3751.58Zinc finger protein 7, putative [Theobroma cacao][more]
gi|802550598|ref|XP_012093067.1|2.6e-3550.46PREDICTED: zinc finger protein 4-like [Jatropha curcas][more]
gi|567860456|ref|XP_006422882.1|3.4e-3551.79hypothetical protein CICLE_v10029351mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005820.1CmoCh19G005820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 81..101
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 79..106
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 76..105
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G005820Cucsa.219370Cucumber (Gy14) v1cgycmoB0627
CmoCh19G005820CmaCh16G003360Cucurbita maxima (Rimu)cmacmoB329
CmoCh19G005820CmaCh19G005680Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G005820CmaCh04G004660Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G005820Cla016073Watermelon (97103) v1cmowmB496
CmoCh19G005820Cla013107Watermelon (97103) v1cmowmB490
CmoCh19G005820Csa3G199020Cucumber (Chinese Long) v2cmocuB504
CmoCh19G005820Csa7G071620Cucumber (Chinese Long) v2cmocuB519
CmoCh19G005820MELO3C018499Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005820MELO3C007595Melon (DHL92) v3.5.1cmomeB477
CmoCh19G005820ClCG02G006550Watermelon (Charleston Gray)cmowcgB459
CmoCh19G005820ClCG05G010390Watermelon (Charleston Gray)cmowcgB464
CmoCh19G005820CSPI03G18060Wild cucumber (PI 183967)cmocpiB510
CmoCh19G005820CSPI07G07090Wild cucumber (PI 183967)cmocpiB525
CmoCh19G005820Lsi03G005520Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G005820Lsi01G009370Bottle gourd (USVL1VR-Ls)cmolsiB460
CmoCh19G005820Lsi05G002460Bottle gourd (USVL1VR-Ls)cmolsiB478
CmoCh19G005820MELO3C018499.2Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005820MELO3C007595.2Melon (DHL92) v3.6.1cmomedB553
CmoCh19G005820CsaV3_7G008060Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G005820CsaV3_3G018110Cucumber (Chinese Long) v3cmocucB0602
CmoCh19G005820Cla97C02G033550Watermelon (97103) v2cmowmbB512
CmoCh19G005820Cla97C01G016340Watermelon (97103) v2cmowmbB502
CmoCh19G005820Cla97C05G092750Watermelon (97103) v2cmowmbB516
CmoCh19G005820Bhi05G000917Wax gourdcmowgoB0642
CmoCh19G005820Bhi01G001291Wax gourdcmowgoB0640
CmoCh19G005820CsGy3G017880Cucumber (Gy14) v2cgybcmoB352
CmoCh19G005820Carg08136Silver-seed gourdcarcmoB0512
CmoCh19G005820Carg16350Silver-seed gourdcarcmoB0615
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G005820CmoCh04G004970Cucurbita moschata (Rifu)cmocmoB395
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005820Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G005820Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G005820Bottle gourd (USVL1VR-Ls)cmolsiB469
CmoCh19G005820Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G005820Cucumber (Gy14) v2cgybcmoB492
CmoCh19G005820Cucumber (Gy14) v2cgybcmoB928
CmoCh19G005820Melon (DHL92) v3.6.1cmomedB526
CmoCh19G005820Melon (DHL92) v3.6.1cmomedB549
CmoCh19G005820Silver-seed gourdcarcmoB0268
CmoCh19G005820Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G005820Watermelon (97103) v2cmowmbB519
CmoCh19G005820Wax gourdcmowgoB0670
CmoCh19G005820Cucurbita moschata (Rifu)cmocmoB110
CmoCh19G005820Cucurbita maxima (Rimu)cmacmoB143