Carg19673 (gene) Silver-seed gourd

Overview
NameCarg19673
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein 7-like
LocationCucurbita_argyrosperma_scaffold_133 : 79545 .. 80138 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTTCAAGGAGAACAAATTGAATCATTGAAGGAGAAAAAAGGAGAAGATGAATCAGTTGAAGAAGAAGAAGAAGAAGAAGAAGCAACAGACCAACCTGAAGGTGTAGGAGCTTTGGAGTGGCTGAACTTGAGCCTGGGTAGGAACAAACAGCTTTTAACTGAATCACAAAGCTCTGCAGGTTCAGCCAAGACCTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCACAAGAGGGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCAGAGAATGATGACTCTGCTTGGTCTGCCAATACATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAAACAAGCAGGGAAGATACTGCAATAGTAGCAAGATTTAATCATGTAAAAAGTGGTTCATGGGCACCTTTCATGCTGGGGGATGCCATGGACTTGAGGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAGTTCTCCCAGAGTCACCACCACTACGAGAACCGCAAATGGAACCATTCAAGCTCGACCTGAATCTCCGACTTTAA

mRNA sequence

ATGATCTTTCAAGGAGAACAAATTGAATCATTGAAGGAGAAAAAAGGAGAAGATGAATCAGTTGAAGAAGAAGAAGAAGAAGAAGAAGCAACAGACCAACCTGAAGGTGTAGGAGCTTTGGAGTGGCTGAACTTGAGCCTGGGTAGGAACAAACAGCTTTTAACTGAATCACAAAGCTCTGCAGGTTCAGCCAAGACCTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCACAAGAGGGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCAGAGAATGATGACTCTGCTTGGTCTGCCAATACATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAAACAAGCAGGGAAGATACTGCAATAGTAGCAAGATTTAATCATGTAAAAAGTGGTTCATGGGCACCTTTCATGCTGGGGGATGCCATGGACTTGAGGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAGTTCTCCCAGAGTCACCACCACTACGAGAACCGCAAATGGAACCATTCAAGCTCGACCTGAATCTCCGACTTTAA

Coding sequence (CDS)

ATGATCTTTCAAGGAGAACAAATTGAATCATTGAAGGAGAAAAAAGGAGAAGATGAATCAGTTGAAGAAGAAGAAGAAGAAGAAGAAGCAACAGACCAACCTGAAGGTGTAGGAGCTTTGGAGTGGCTGAACTTGAGCCTGGGTAGGAACAAACAGCTTTTAACTGAATCACAAAGCTCTGCAGGTTCAGCCAAGACCTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAGGCATTGGGAGGCCATCAAAATGCCCACAAGAGGGAGAGGAGTGCAGCCAGAAGGCACCAAGCCCAGAGAATGATGACTCTGCTTGGTCTGCCAATACATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAAACAAGCAGGGAAGATACTGCAATAGTAGCAAGATTTAATCATGTAAAAAGTGGTTCATGGGCACCTTTCATGCTGGGGGATGCCATGGACTTGAGGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAGTTCTCCCAGAGTCACCACCACTACGAGAACCGCAAATGGAACCATTCAAGCTCGACCTGAATCTCCGACTTTAA

Protein sequence

MIFQGEQIESLKEKKGEDESVEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPESPPLREPQMEPFKLDLNLRL
Homology
[Close]
BLAST of Carg19673 vs. NCBI nr
Match: XP_023551737.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 3.6e-96
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKKXXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLTESQSS 60
           MIFQGEQIESLKEKKXXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLTESQSS
Sbjct: 1   MIFQGEQIESLKEKKXXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLTESQSS 60

Query: 61  AGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVRSL 120
           AGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVRSL
Sbjct: 61  AGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVRSL 120

Query: 121 GVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPESPP 180
           GVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPESPP
Sbjct: 121 GVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPESPP 180

Query: 181 LREPQMEPFKLDLNLRL 198
           LREPQMEPFKLDLNLRL
Sbjct: 181 LREPQMEPFKLDLNLRL 197

[Close]
BLAST of Carg19673 vs. NCBI nr
Match: XP_022922826.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-93
Identity = 196/201 (97.51%), Postives = 196/201 (97.51%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKK----XXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKEKK    XXXXXXXXXXXXXXXX QPEGVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKXXXXXXXXXXXXXXXXXXXXXQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120
           SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180
           VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 ESPPLREPQMEPFKLDLNLRL 198
           ESPPLREPQMEPFKLDLNLRL
Sbjct: 181 ESPPLREPQMEPFKLDLNLRL 201

[Close]
BLAST of Carg19673 vs. NCBI nr
Match: XP_022984254.1 (zinc finger protein 7-like [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 191/202 (94.55%), Postives = 193/202 (95.54%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEK-----KXXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLT 60
           MIFQGEQIESLKEK      XXXXXXXXXXXXXXXXDQP GVGALEWLNLSLGRNKQLL 
Sbjct: 1   MIFQGEQIESLKEKXXXXXXXXXXXXXXXXXXXXXXDQPAGVGALEWLNLSLGRNKQLLP 60

Query: 61  ESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNS 120
           ESQSSAGSAKTFSCNFCKRVF+SSQALGGHQNAHKRERSAARRHQAQRMMTLLGLP+HNS
Sbjct: 61  ESQSSAGSAKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPMHNS 120

Query: 121 MVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVL 180
           MVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLG AMDLRWPGSFRFTQHQVL
Sbjct: 121 MVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGGAMDLRWPGSFRFTQHQVL 180

Query: 181 PESPPLREPQMEPFKLDLNLRL 198
           PESPPLREPQMEPFKLDLNLRL
Sbjct: 181 PESPPLREPQMEPFKLDLNLRL 202

[Close]
BLAST of Carg19673 vs. NCBI nr
Match: XP_011651233.1 (PREDICTED: zinc finger protein 7-like [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_3G199020 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79
Identity = 171/205 (83.41%), Postives = 180/205 (87.80%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKK-------XXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KE K       XXXXXXXXXXXXXXXX QP+GVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIH 120
           L +SQ SA S KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQA +MMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSW-APFMLGDAMDLRWPGSFRFTQH 180
           NSMVRSLGVQPHSLVHK  REDTA+VARFNHVK+GSW APFMLGDAMD  WPGSFRF QH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QVLPESPPLREPQMEPFKLDLNLRL 198
           Q+LPE PP REP MEPFKLDL+LRL
Sbjct: 181 QILPEPPPPREPPMEPFKLDLSLRL 205

[Close]
BLAST of Carg19673 vs. NCBI nr
Match: XP_008456235.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 5.7e-78
Identity = 170/209 (81.34%), Postives = 178/209 (85.17%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKK-----------XXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGR 60
           MIFQGEQIES KE K           XXXXXXXXXXXXXXXX  P+GVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLG 120
           NKQ L +SQ SA S KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQA +MMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSW-APFMLGDAMDLRWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHK  REDTA+VARFNHVK+GSW APFMLGDA D  WPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FTQHQVLPESPPLREPQMEPFKLDLNLRL 198
           F QHQ+LPE PP REP MEPFKLDLNLRL
Sbjct: 181 FAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]
BLAST of Carg19673 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 58/148 (39.19%), Postives = 75/148 (50.68%), Query Frame = 0 

Query: 63  SAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ-------------------AQR 122
           S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                     A  
Sbjct: 81  SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAAT 140

Query: 123 MMTLLGLPIHNS------MVRSLGVQPHSLVHKTS----REDTAI--VARFNHVKSGSWA 179
              L  LP+H S        R+LG++ HS  H  S      +T I  +ARFN    G+  
Sbjct: 141 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 200

[Close]
BLAST of Carg19673 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 0 

Query: 55  TESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHN 114
           T+S     + + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 115 SMVRSLGVQPHS-LVHKTSREDTAIVARFNHV-KSGSWAPFML---GDAMDLRWPGSFR 169
               SLG+Q HS L+H T  +   +V+RF+H    G+  P          D  WPGSFR
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]
BLAST of Carg19673 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 59  SSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLG-------LP 118
           S++   K FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q        G       +P
Sbjct: 96  STSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVP 155

Query: 119 IHNSMV-RSLGVQPHSLVHKTS 133
            H     R+LG+Q HS+ HK S
Sbjct: 156 FHGQYSNRTLGIQAHSMSHKPS 177

[Close]
BLAST of Carg19673 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 74.7 bits (182), Expect = 7.1e-14
Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 0 

Query: 53  LLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLG--- 112
           ++ ES +S    K FSCN+C+R FYSSQALGGHQNAHKRER+ A+R   QRM        
Sbjct: 48  IVNESTTST-EQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFG 107

Query: 113 -------LPIHN--SMVRSLGVQPHSLVHKTS 133
                  LP H   +  RSLG+Q HS+ HK S
Sbjct: 108 HPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]
BLAST of Carg19673 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 0 

Query: 65  KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------------AQRM 124
           + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q                      R 
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 125 MTLLGLPIHNSMVR--SLGVQPHSLVHKTS 133
            ++  LP+H S+    +LG+Q HS +HK S
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]
BLAST of Carg19673 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16
Identity = 58/148 (39.19%), Postives = 75/148 (50.68%), Query Frame = 0 

Query: 63  SAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ-------------------AQR 122
           S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                     A  
Sbjct: 81  SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAAT 140

Query: 123 MMTLLGLPIHNS------MVRSLGVQPHSLVHKTS----REDTAI--VARFNHVKSGSWA 179
              L  LP+H S        R+LG++ HS  H  S      +T I  +ARFN    G+  
Sbjct: 141 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 200

[Close]
BLAST of Carg19673 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 0 

Query: 55  TESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHN 114
           T+S     + + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 115 SMVRSLGVQPHS-LVHKTSREDTAIVARFNHV-KSGSWAPFML---GDAMDLRWPGSFR 169
               SLG+Q HS L+H T  +   +V+RF+H    G+  P          D  WPGSFR
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]
BLAST of Carg19673 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 0 

Query: 53  LLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLG--- 112
           ++ ES +S    K FSCN+C+R FYSSQALGGHQNAHKRER+ A+R   QRM        
Sbjct: 48  IVNESTTST-EQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFG 107

Query: 113 -------LPIHN--SMVRSLGVQPHSLVHKTS 133
                  LP H   +  RSLG+Q HS+ HK S
Sbjct: 108 HPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]
BLAST of Carg19673 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-12
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 0 

Query: 65  KTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------------AQRM 124
           + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q                      R 
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 125 MTLLGLPIHNSMVR--SLGVQPHSLVHKTS 133
            ++  LP+H S+    +LG+Q HS +HK S
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]
BLAST of Carg19673 vs. Swiss-Prot
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 57  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRH 100
           S +   S + F C +C R FY+SQALGGHQNAHKRER+AARR+
Sbjct: 28  SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70

[Close]
BLAST of Carg19673 vs. TrEMBL
Match: tr|A0A0A0L948|A0A0A0L948_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.0e-79
Identity = 171/205 (83.41%), Postives = 180/205 (87.80%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKK-------XXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KE K       XXXXXXXXXXXXXXXX QP+GVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIH 120
           L +SQ SA S KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQA +MMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSW-APFMLGDAMDLRWPGSFRFTQH 180
           NSMVRSLGVQPHSLVHK  REDTA+VARFNHVK+GSW APFMLGDAMD  WPGSFRF QH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QVLPESPPLREPQMEPFKLDLNLRL 198
           Q+LPE PP REP MEPFKLDL+LRL
Sbjct: 181 QILPEPPPPREPPMEPFKLDLSLRL 205

[Close]
BLAST of Carg19673 vs. TrEMBL
Match: tr|A0A1S3C410|A0A1S3C410_CUCME (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-78
Identity = 170/209 (81.34%), Postives = 178/209 (85.17%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKK-----------XXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGR 60
           MIFQGEQIES KE K           XXXXXXXXXXXXXXXX  P+GVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLG 120
           NKQ L +SQ SA S KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQA +MMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSW-APFMLGDAMDLRWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHK  REDTA+VARFNHVK+GSW APFMLGDA D  WPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FTQHQVLPESPPLREPQMEPFKLDLNLRL 198
           F QHQ+LPE PP REP MEPFKLDLNLRL
Sbjct: 181 FAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]
BLAST of Carg19673 vs. TrEMBL
Match: tr|M5W8E7|M5W8E7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G137500 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 102/170 (60.00%), Postives = 119/170 (70.00%), Query Frame = 0 

Query: 32  DQPEGVGALEWLNLSLGRN---KQLLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNA 91
           ++ E +   EWLNLSLGRN    +  T+SQS   S K FSCNFC R F+SSQALGGHQNA
Sbjct: 30  EETEDLNTGEWLNLSLGRNLLSTEGDTDSQSRPASGKVFSCNFCMRKFFSSQALGGHQNA 89

Query: 92  HKRERSAARRHQAQRMMTLLGLPIHNSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSG 151
           HKRER AARR+Q+QRMM+++G P   S VRSL VQPHSLVHK +R++T++VARFN   + 
Sbjct: 90  HKRERGAARRYQSQRMMSMMGFPFTTSTVRSLSVQPHSLVHKPNRDETSLVARFNDANTR 149

Query: 152 -SWAPFMLGDAMDLRWPGSFRFTQHQVLPESPPLREPQMEPFKLDLNLRL 198
            S  PF L D MD  WPGSFR    QVL       EPQ EP KLDLNLRL
Sbjct: 150 FSMRPFTLDDVMDSMWPGSFRL-DSQVL-------EPQSEPCKLDLNLRL 191

[Close]
BLAST of Carg19673 vs. TrEMBL
Match: tr|B9GHU0|B9GHU0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G298700v3 PE=4 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 108/203 (53.20%), Postives = 125/203 (61.58%), Query Frame = 0 

Query: 1   MIFQGEQIESLKEKKXXXXXXXXXXXXXXXXDQPEGVGALEWLNLSLGRNKQLLT---ES 60
           MIFQ E IE +K  K                D   G    EWLNLSLG N        +S
Sbjct: 57  MIFQEEAIE-IKTLKHQNEMLNSNNSNEGYDDNNPG----EWLNLSLGGNSPSTAGDYDS 116

Query: 61  QSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMV 120
           QS   S+K FSCNFC+R F+SSQALGGHQNAHKRER AARR+ +QRMMT++GLP+++ M 
Sbjct: 117 QSRPTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTVMGLPVNSPMA 176

Query: 121 RSLGVQPHSLVHKTSREDTAIVARFNHVKSG---SWAPFMLGDAMDLRWPGSFRFTQHQV 180
           RSLGV+PH+LVHK +R+ TAI  RFN    G   SW PF + D  DL WPGSFR  Q   
Sbjct: 177 RSLGVRPHTLVHKPNRDGTAIAGRFNEASPGFDMSWMPFTVDDTTDLTWPGSFRLDQ--- 236

Query: 181 LPESPPLREPQMEPFKLDLNLRL 198
               PP  E   EP KLDLNLRL
Sbjct: 237 ----PP--ETSSEPLKLDLNLRL 245

[Close]
BLAST of Carg19673 vs. TrEMBL
Match: tr|A0A2P6PLQ3|A0A2P6PLQ3_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0254511 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 101/170 (59.41%), Postives = 117/170 (68.82%), Query Frame = 0 

Query: 32  DQPEGVGALEWLNLSLGRN---KQLLTESQSSAGSAKTFSCNFCKRVFYSSQALGGHQNA 91
           ++ E +   EWLNLSLG N    +  T+SQS   S K FSCNFC R F+SSQALGGHQNA
Sbjct: 28  EETEDLNQGEWLNLSLGGNLLSTEGDTDSQSRPASGKVFSCNFCMRKFFSSQALGGHQNA 87

Query: 92  HKRERSAARRHQAQRMMTLLGLPIHNSMVRSLGVQPHSLVHKTSREDTAIVARFNHVKSG 151
           HKRER AARR+Q+QRMM+++G P + S +RSL VQPHSLVHK SR +TA+VARFN  K+ 
Sbjct: 88  HKRERGAARRYQSQRMMSMMGFPFNTSTLRSLNVQPHSLVHKPSRYETALVARFNDAKTR 147

Query: 152 -SWAPFMLGDAMDLRWPGSFRFTQHQVLPESPPLREPQMEPFKLDLNLRL 198
            S  PF L D MD  WPGSFR          P   EPQ EP KLDLNLRL
Sbjct: 148 FSMMPFTLDDVMDSMWPGSFRL--------DPLELEPQSEPCKLDLNLRL 189

The following BLAST results are available for this feature:
BLAST of Carg19673 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551737.13.6e-96100.00zinc finger protein 4-like [Cucurbita pepo subsp. pepo][more]
XP_022922826.11.3e-9397.51zinc finger protein 4-like [Cucurbita moschata][more]
XP_022984254.11.3e-9094.55zinc finger protein 7-like [Cucurbita maxima][more]
XP_011651233.13.0e-7983.41PREDICTED: zinc finger protein 7-like [Cucumis sativus] >KGN57489.1 hypothetical... [more]
XP_008456235.15.7e-7881.34PREDICTED: zinc finger protein 7-like [Cucumis melo][more]
BLAST of Carg19673 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66140.12.3e-1739.19zinc finger protein 4[more]
AT1G24625.11.2e-1642.86zinc finger protein 7[more]
AT5G10970.13.2e-1450.00C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G25160.17.1e-1450.00zinc finger protein 3[more]
AT1G80730.12.1e-1344.44zinc-finger protein 1[more]
BLAST of Carg19673 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39263|ZFP4_ARATH4.2e-1639.19Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
sp|Q39266|ZFP7_ARATH2.1e-1542.86Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
sp|Q39262|ZFP3_ARATH1.3e-1250.00Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
sp|Q42485|ZFP1_ARATH3.7e-1244.44Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
sp|Q9FFX4|KNU_ARATH1.2e-0762.79Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1[more]
BLAST of Carg19673 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L948|A0A0A0L948_CUCSA2.0e-7983.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1[more]
tr|A0A1S3C410|A0A1S3C410_CUCME3.8e-7881.34zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1[more]
tr|M5W8E7|M5W8E7_PRUPE1.4e-4360.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G137500 PE=4 SV=1[more]
tr|B9GHU0|B9GHU0_POPTR1.4e-4353.20Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G298700v3 PE=... [more]
tr|A0A2P6PLQ3|A0A2P6PLQ3_ROSCH3.9e-4359.41Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19673-RACarg19673-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..31
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 46..116
e-value: 5.9E-8
score: 34.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 6..197
NoneNo IPR availablePANTHERPTHR26374:SF228SUBFAMILY NOT NAMEDcoord: 6..197
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 69..89
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 67..94
score: 11.198
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 64..94

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19673Cla013107Watermelon (97103) v1carwmB0288
Carg19673Cla016073Watermelon (97103) v1carwmB0289
Carg19673Csa7G071620Cucumber (Chinese Long) v2carcuB0323
Carg19673Csa3G199020Cucumber (Chinese Long) v2carcuB0320
Carg19673MELO3C018499Melon (DHL92) v3.5.1carmeB0295
Carg19673MELO3C019555Melon (DHL92) v3.5.1carmeB0296
Carg19673ClCG02G006550Watermelon (Charleston Gray)carwcgB0288
Carg19673CSPI03G18060Wild cucumber (PI 183967)carcpiB0326
Carg19673CSPI07G07090Wild cucumber (PI 183967)carcpiB0329
Carg19673Cucsa.219370Cucumber (Gy14) v1carcgyB0344
Carg19673CmaCh04G004660Cucurbita maxima (Rimu)carcmaB0408
Carg19673CmaCh19G005680Cucurbita maxima (Rimu)carcmaB0407
Carg19673CmaCh16G003360Cucurbita maxima (Rimu)carcmaB0406
Carg19673CmoCh04G004970Cucurbita moschata (Rifu)carcmoB0403
Carg19673Lsi03G005520Bottle gourd (USVL1VR-Ls)carlsiB267
Carg19673Cp4.1LG01g02380Cucurbita pepo (Zucchini)carcpeB0408
Carg19673MELO3C018499.2Melon (DHL92) v3.6.1carmedB0306
Carg19673MELO3C019555.2Melon (DHL92) v3.6.1carmedB0307
Carg19673CsaV3_7G008060Cucumber (Chinese Long) v3carcucB0329
Carg19673CsaV3_3G018110Cucumber (Chinese Long) v3carcucB0326
Carg19673Cla97C02G033550Watermelon (97103) v2carwmbB0303
Carg19673Cla97C05G092750Watermelon (97103) v2carwmbB0304
Carg19673Bhi01G001291Wax gourdcarwgoB0382
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19673Carg08136Silver-seed gourdcarcarB324
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19673Cucumber (Gy14) v2carcgybB0307
Carg19673Cucumber (Gy14) v1carcgyB0348
Carg19673Cucurbita maxima (Rimu)carcmaB0405
Carg19673Cucurbita moschata (Rifu)carcmoB0401
Carg19673Cucurbita moschata (Rifu)carcmoB0402
Carg19673Cucurbita pepo (Zucchini)carcpeB0407
Carg19673Cucurbita pepo (Zucchini)carcpeB0409
Carg19673Bottle gourd (USVL1VR-Ls)carlsiB270
Carg19673Watermelon (Charleston Gray)carwcgB0289
Carg19673Watermelon (97103) v2carwmbB0305
Carg19673Wax gourdcarwgoB0383