Carg08099 (gene) Silver-seed gourd

NameCarg08099
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionagamous-like MADS-box protein AGL62
LocationCucurbita_argyrosperma_scaffold_050 : 719727 .. 720474 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGAGTAGAGGCAGGCAAAAGGTTGAGATGGTCAAGATGCCTAATGAGAGCAACCTCCAAGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTTTGCGGTGCCGAGATTGCCATCATCGTCTTCTCCCCCGGGAAGAAAGTCTTCTCCTTTGGTCACCCTTGTGTTGAGGCTCTTATTGAACGCTTCGTCACTCGAAACCCTCCACCGAGCTCTGGTACACTTCAATTGATCGAAGCTCATCGGAATGCTAATGTTCGCGAACTAAATGCACAACTGACTCAAGTGTTGAACCATTTGGAGATGGAGCGGAAACGGGGCGAGGAGTTGAATAAGTTACGAAAGGCTAATCAGGTATTGAATCATTACTAAACTCAAAAGCTTACGTTATAACGAGTTATAGTATGTTTAATTTCTTTTTTATGGGTATTCTTGAAATTAGCCGCAATGTTGGTGGGAACTTCCTATCGAAGAAATGGAATTGCATCAACTCGAACAACTTAAATTGTCGTTGGACGAGCTAAAAAAGAATGTTACGCAACAAGCGGATCGGATTTTGATTCAAACCTCCAATGGCAACCCACCCCCGCAATTCTTCTCGACTCCGACGCCTGCAAACCCGAACCAACAAGGCGGTGTCTATGTCGTCGATCAGAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

mRNA sequence

ATGAGGAAGAGTAGAGGCAGGCAAAAGGTTGAGATGGTCAAGATGCCTAATGAGAGCAACCTCCAAGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTTTGCGGTGCCGAGATTGCCATCATCGTCTTCTCCCCCGGGAAGAAAGTCTTCTCCTTTGGTCACCCTTGTGTTGAGGCTCTTATTGAACGCTTCGTCACTCGAAACCCTCCACCGAGCTCTGGTACACTTCAATTGATCGAAGCTCATCGGAATGCTAATGTTCGCGAACTAAATGCACAACTGACTCAAGTGTTGAACCATTTGGAGATGGAGCGGAAACGGGGCGAGGAGTTGAATAAGTTACGAAAGGCTAATCAGCCGCAATGTTGGTGGGAACTTCCTATCGAAGAAATGGAATTGCATCAACTCGAACAACTTAAATTGTCGTTGGACGAGCTAAAAAAGAATGTTACGCAACAAGCGGATCGGATTTTGATTCAAACCTCCAATGGCAACCCACCCCCGCAATTCTTCTCGACTCCGACGCCTGCAAACCCGAACCAACAAGGCGGTGTCTATGTCGTCGATCAGAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Coding sequence (CDS)

ATGAGGAAGAGTAGAGGCAGGCAAAAGGTTGAGATGGTCAAGATGCCTAATGAGAGCAACCTCCAAGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTTTGCGGTGCCGAGATTGCCATCATCGTCTTCTCCCCCGGGAAGAAAGTCTTCTCCTTTGGTCACCCTTGTGTTGAGGCTCTTATTGAACGCTTCGTCACTCGAAACCCTCCACCGAGCTCTGGTACACTTCAATTGATCGAAGCTCATCGGAATGCTAATGTTCGCGAACTAAATGCACAACTGACTCAAGTGTTGAACCATTTGGAGATGGAGCGGAAACGGGGCGAGGAGTTGAATAAGTTACGAAAGGCTAATCAGCCGCAATGTTGGTGGGAACTTCCTATCGAAGAAATGGAATTGCATCAACTCGAACAACTTAAATTGTCGTTGGACGAGCTAAAAAAGAATGTTACGCAACAAGCGGATCGGATTTTGATTCAAACCTCCAATGGCAACCCACCCCCGCAATTCTTCTCGACTCCGACGCCTGCAAACCCGAACCAACAAGGCGGTGTCTATGTCGTCGATCAGAAGAACATGATCTCTCATCTTCCCTACAACTATGGCTCCTATGGATCAAGAGGTTTCTTTTGA

Protein sequence

MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEELNKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFFSTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF
BLAST of Carg08099 vs. NCBI nr
Match: XP_022942821.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.8 bits (1122), Expect = 4.3e-119
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180
           NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180

Query: 181 STPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
            TPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

BLAST of Carg08099 vs. NCBI nr
Match: XP_022975753.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180
           NKLRKANQPQCWWELPIEEMEL+QLEQLKLSLDELKKNV QQADRILIQTSNGNPPPQFF
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQTSNGNPPPQFF 180

Query: 181 STPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
            TPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

BLAST of Carg08099 vs. NCBI nr
Match: XP_022149295.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 407.5 bits (1046), Expect = 2.8e-110
Identity = 203/219 (92.69%), Postives = 212/219 (96.80%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 180
           NKLRKA+Q Q WWELPIEEME++QLEQLK SL+ELKKNVTQ ADRIL+QTSNGNPPPQ+F
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQTSNGNPPPQYF 180

Query: 181 STPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
            TP+PANPNQQGGV+VVD KNMISHLPYNYGSYGSRGFF
Sbjct: 181 PTPSPANPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

BLAST of Carg08099 vs. NCBI nr
Match: XP_008454428.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 2.0e-103
Identity = 201/226 (88.94%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQT-SNGNPPPQF 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 -----FSTPTPAN-PNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
                  TPT  N PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

BLAST of Carg08099 vs. NCBI nr
Match: XP_004150272.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hypothetical protein Csa_4G000530 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 1.7e-102
Identity = 200/228 (87.72%), Postives = 206/228 (90.35%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQT-SNGNPPPQ- 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 FFSTPTPA-------NPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
            F T  P         PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 228

BLAST of Carg08099 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62)

HSP 1 Score: 196.1 bits (497), Expect = 2.3e-50
Identity = 104/168 (61.90%), Postives = 130/168 (77.38%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+ LE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLR-KANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADR 166
           EL K+R K      WWE P+EE+ L QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

BLAST of Carg08099 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61)

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39
Identity = 86/161 (53.42%), Postives = 119/161 (73.91%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+ +E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKANQPQC---WWELPIEEMELHQLEQLKLSLDELKKNV 160
           ++RK +  +    WWE P+EEM + QL+++K +L+EL+K V
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

BLAST of Carg08099 vs. TAIR10
Match: AT4G36590.1 (MADS-box transcription factor family protein)

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 93/227 (40.97%), Postives = 138/227 (60.79%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           +R ++GRQK+EM KM NESNLQVTFSKRR GLFKKASELCTL GAEI +IVFSPG KVFS
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPS-----SGTLQLIEAHRNANVRELNAQLTQVLNHLEMERK 120
           FGHP V+ LI RF   N   +     +  LQL+E   + N++ LN  LT+VL + E E++
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121

Query: 121 RGEELNKLRKA-NQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGN 180
           +   L+ L+++  Q   W+E  ++++++++  QL  +L ++KK + ++    + Q S  N
Sbjct: 122 KRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVRE----MSQYSQVN 181

Query: 181 PPPQFFSTPTPANPNQQGGVYVVDQK--------NMI--SHLPYNYG 212
               +F   +        G+ + DQ+        NM+  +H P  +G
Sbjct: 182 VSQNYFGQSSGVIGGGNVGIDLFDQRRNAFNYNPNMVFPNHTPPMFG 224

BLAST of Carg08099 vs. TAIR10
Match: AT1G01530.1 (AGAMOUS-like 28)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 73/175 (41.71%), Postives = 93/175 (53.14%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQL-TQVLN---------HLE 121
           GHP V  L++  + R           +  H N N  E   +L  Q+LN            
Sbjct: 63  GHPNVNKLLDHSLGR-----------VIRHNNTNFAESRTKLRIQMLNXXXXXXXXXXXX 122

Query: 122 MERKRGEELNKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRI 167
                        +    + WW     E+ L Q   +K  L+ LKK V ++  ++
Sbjct: 123 XXXXXXXXXXXXXENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

BLAST of Carg08099 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-25
Identity = 72/172 (41.86%), Postives = 98/172 (56.98%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V              
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVXXXXXXXXXXXXXX 121

Query: 121 NKLRKANQPQC-WWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTS 172
                       WW     E+ L Q   +   L +LKK V ++A +++ QT+
Sbjct: 122 XXXXXXXXXXXEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

BLAST of Carg08099 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-49
Identity = 104/168 (61.90%), Postives = 130/168 (77.38%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+ LE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLR-KANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADR 166
           EL K+R K      WWE P+EE+ L QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

BLAST of Carg08099 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-38
Identity = 86/161 (53.42%), Postives = 119/161 (73.91%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+ +E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKANQPQC---WWELPIEEMELHQLEQLKLSLDELKKNV 160
           ++RK +  +    WWE P+EEM + QL+++K +L+EL+K V
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

BLAST of Carg08099 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-24
Identity = 73/175 (41.71%), Postives = 93/175 (53.14%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQL-TQVLN---------HLE 121
           GHP V  L++  + R           +  H N N  E   +L  Q+LN            
Sbjct: 63  GHPNVNKLLDHSLGR-----------VIRHNNTNFAESRTKLRIQMLNXXXXXXXXXXXX 122

Query: 122 MERKRGEELNKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRI 167
                        +    + WW     E+ L Q   +K  L+ LKK V ++  ++
Sbjct: 123 XXXXXXXXXXXXXENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

BLAST of Carg08099 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-24
Identity = 72/172 (41.86%), Postives = 98/172 (56.98%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V              
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVXXXXXXXXXXXXXX 121

Query: 121 NKLRKANQPQC-WWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTS 172
                       WW     E+ L Q   +   L +LKK V ++A +++ QT+
Sbjct: 122 XXXXXXXXXXXEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTN 171

BLAST of Carg08099 vs. Swiss-Prot
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 60/162 (37.04%), Postives = 96/162 (59.26%), Query Frame = 0

Query: 6   GRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPC 65
           GR+K++M  + + +  QVTFSKRR+GLFKKASEL TLC AE+ I+VFSPG K FS+G P 
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEE-LNKLR 125
           ++++ ERF+       SG  +    +R   ++ L+ +L  +   +E E++RGE+   KL 
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYR-PKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 126 KANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRI 167
            A   +  ++  IE + L +L + K  L  +   +  Q + +
Sbjct: 122 SAGDER--FKESIETLTLDELNEYKDRLQTVHGRIEGQVNHL 160

BLAST of Carg08099 vs. TrEMBL
Match: tr|A0A1S3BYP6|A0A1S3BYP6_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103
Identity = 201/226 (88.94%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQT-SNGNPPPQF 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 -----FSTPTPAN-PNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
                  TPT  N PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

BLAST of Carg08099 vs. TrEMBL
Match: tr|A0A0A0KWA9|A0A0A0KWA9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-102
Identity = 200/228 (87.72%), Postives = 206/228 (90.35%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQT-SNGNPPPQ- 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 FFSTPTPA-------NPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
            F T  P         PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 228

BLAST of Carg08099 vs. TrEMBL
Match: tr|A0A067EEZ4|A0A067EEZ4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039654mg PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76
Identity = 152/218 (69.72%), Postives = 182/218 (83.49%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           +KS+GRQKVEMVKMPNESNLQVTFSKRR+GLFKKASELCTLCGA+IAIIVFSPGKKVFSF
Sbjct: 7   KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 66

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEELN 121
           GHPCVE +++R++TRNPP  SGT+QLIEAHRNA+VRELN QLTQVLN LE+E+KRGEELN
Sbjct: 67  GHPCVETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEELN 126

Query: 122 KLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFFS 181
           ++RKA+Q QCWWE PIEE+ L QLEQLK+SL+ELKKNV +QA+++LIQ+SN   PPQFF+
Sbjct: 127 QMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEKMLIQSSN---PPQFFA 186

Query: 182 TPT--------PANPNQQGGVYVVDQKNMISHLPYNYG 212
             +        P +PN    V+  +  NM+ H  YN G
Sbjct: 187 GSSSNAGGMNLPFDPNNNAAVF--NPNNMMPHPGYNPG 219

BLAST of Carg08099 vs. TrEMBL
Match: tr|A0A1Q3BV83|A0A1Q3BV83_CEPFO (SRF-TF domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15288 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.5e-75
Identity = 158/220 (71.82%), Postives = 181/220 (82.27%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RKS+GRQKVEMVKM NESNLQVTFSKRR+GLFKKASELCTLCGAEIAI+VFSPGKKVFSF
Sbjct: 1   RKSKGRQKVEMVKMNNESNLQVTFSKRRTGLFKKASELCTLCGAEIAIVVFSPGKKVFSF 60

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQL-IEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 121
           GHPCVE++I+RF+TRNP P S T+QL IEAHRNANVRELNAQLTQVLN LE E +RGEEL
Sbjct: 61  GHPCVESIIDRFLTRNPTPPSDTVQLNIEAHRNANVRELNAQLTQVLNQLEAENRRGEEL 120

Query: 122 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFF 181
           N+LRKANQ QCWW+ P+EE+ + QL QLK SLD+LKKNV +Q DR+LIQ+SN   PPQFF
Sbjct: 121 NQLRKANQAQCWWQAPVEELTMPQLVQLKASLDDLKKNVAKQVDRLLIQSSN---PPQFF 180

Query: 182 -STPTPANPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 220
             + +  NP  +    V    NM+ H  Y+ G YGSRGFF
Sbjct: 181 PGSSSSGNPPFEPKNNVGFNPNMVPH-GYHPG-YGSRGFF 215

BLAST of Carg08099 vs. TrEMBL
Match: tr|A0A2H5P9P2|A0A2H5P9P2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_114480 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.7e-74
Identity = 142/180 (78.89%), Postives = 165/180 (91.67%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           +KS+GRQKVEMVKMPNESNLQVTFSKRR+GLFKKASELCTLCGA+IAIIVFSPGKKVFSF
Sbjct: 7   KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 66

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEELN 121
           GHPCVE +++R++TRNPP  SGT+QLIEAHRNA VRELN QLTQVLN LE+E+KRGEELN
Sbjct: 67  GHPCVETIVDRYLTRNPPQISGTMQLIEAHRNAGVRELNMQLTQVLNQLEIEKKRGEELN 126

Query: 122 KLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQTSNGNPPPQFFS 181
           ++RKA+Q QCWWE PIEE+ L QLEQLK+SL+ELKKNV +QA+++LIQ SN   PPQFF+
Sbjct: 127 QMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEKMLIQCSN---PPQFFA 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942821.14.3e-11999.54agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous... [more]
XP_022975753.11.1e-11798.63agamous-like MADS-box protein AGL62 [Cucurbita maxima][more]
XP_022149295.12.8e-11092.69agamous-like MADS-box protein AGL62 [Momordica charantia][more]
XP_008454428.12.0e-10388.94PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
XP_004150272.11.7e-10287.72PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hyp... [more]
Match NameE-valueIdentityDescription
AT5G60440.12.3e-5061.90AGAMOUS-like 62[more]
AT2G24840.11.4e-3953.42AGAMOUS-like 61[more]
AT4G36590.13.6e-3540.97MADS-box transcription factor family protein[more]
AT1G01530.12.0e-2541.71AGAMOUS-like 28[more]
AT1G65360.13.4e-2541.86AGAMOUS-like 23[more]
Match NameE-valueIdentityDescription
sp|Q9FKK2|AGL62_ARATH4.2e-4961.90Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=... [more]
sp|Q4PSU4|AGL61_ARATH2.6e-3853.42Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=... [more]
sp|Q9LMM8|AGL28_ARATH3.6e-2441.71Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=... [more]
sp|O80807|AGL23_ARATH6.1e-2441.86Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=... [more]
sp|O64703|AGL29_ARATH1.3e-1837.04Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BYP6|A0A1S3BYP6_CUCME1.3e-10388.94agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4... [more]
tr|A0A0A0KWA9|A0A0A0KWA9_CUCSA1.1e-10287.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1[more]
tr|A0A067EEZ4|A0A067EEZ4_CITSI1.0e-7669.72Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039654mg PE=4 SV=1[more]
tr|A0A1Q3BV83|A0A1Q3BV83_CEPFO1.5e-7571.82SRF-TF domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 G... [more]
tr|A0A2H5P9P2|A0A2H5P9P2_CITUN3.7e-7478.89Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_114480 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033896MADS_MEF2-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08099-RACarg08099-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..165
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availablePANTHERPTHR11945:SF185AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATEDcoord: 4..184
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 4..184
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 42..63
score: 41.44
coord: 27..42
score: 67.1
coord: 7..27
score: 46.13
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..64
e-value: 1.7E-30
score: 117.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 16..61
e-value: 4.0E-24
score: 83.7
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 5..65
score: 23.549
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 17..97
e-value: 1.3E-26
score: 94.3
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 6..78
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 6..73
e-value: 6.55466E-34
score: 116.883

The following gene(s) are paralogous to this gene:

None