CsGy4G000040 (gene) Cucumber (Gy14) v2

NameCsGy4G000040
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionagamous-like MADS-box protein AGL62
LocationChr4 : 33962 .. 34795 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGAGCAGAGGTAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTCTGTGGTGCCGAGATTGCCATCATTGTCTTCTCACCTGGGAAGAAGGTCTTTTCCTTTGGCCACCCTTGCGTCGAGGCTCTCATCGAGCGCTTTGTCACACGAAACCCTCCACCCAGTTCTGGTACGCTGCAGCTTATCGAAGCTCACCGGAATGCTAATGTTCGAGAACTTAATGCTCAACTTACTCAAGTTCTCAACCAACTAGAAATGGAGCGGAAGCGTGGGGAAGAGTTGAACAAACTACGCAAGGCAAGCCAGGTATTATACACACACACATACACCACCTTTAAGATATCTCCTCCGTCGTTTGAAACTGAGATCATCTCTCTTGTCTTCTCCTCCCCAATTTGTTTATCATCTTTCTTAAAAGAACCATTTACGAGTTAAAGTTTTTGTTCTATTAAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCTTCGTTGGATGAGCTAAAGAAGAATGTGACTCAACAAGCAGATCGGATTTTGATTCAGACTTCTTCTAATGCCAATCCCCCGACGCAGTTGATCTTCCCGACTCAGATTCCGACTCAAACATCAACAACAACAAATGGCCCCAACCAGCAACCCGGGCTTTTCGTCGTGGATCCTAAGAACATCATCTCCCATCTTCCCTTCAACTATGGTTCCTATGGATCAAGAGGTTTCTTTTGA

mRNA sequence

ATGAGGAAGAGCAGAGGTAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTCTGTGGTGCCGAGATTGCCATCATTGTCTTCTCACCTGGGAAGAAGGTCTTTTCCTTTGGCCACCCTTGCGTCGAGGCTCTCATCGAGCGCTTTGTCACACGAAACCCTCCACCCAGTTCTGGTACGCTGCAGCTTATCGAAGCTCACCGGAATGCTAATGTTCGAGAACTTAATGCTCAACTTACTCAAGTTCTCAACCAACTAGAAATGGAGCGGAAGCGTGGGGAAGAGTTGAACAAACTACGCAAGGCAAGCCAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCTTCGTTGGATGAGCTAAAGAAGAATGTGACTCAACAAGCAGATCGGATTTTGATTCAGACTTCTTCTAATGCCAATCCCCCGACGCAGTTGATCTTCCCGACTCAGATTCCGACTCAAACATCAACAACAACAAATGGCCCCAACCAGCAACCCGGGCTTTTCGTCGTGGATCCTAAGAACATCATCTCCCATCTTCCCTTCAACTATGGTTCCTATGGATCAAGAGGTTTCTTTTGA

Coding sequence (CDS)

ATGAGGAAGAGCAGAGGTAGGCAAAAGGTGGAGATGGTGAAGATGCCAAATGAGAGCAACCTTCAGGTCACCTTCTCCAAGCGTCGCTCCGGCCTCTTCAAGAAAGCTAGCGAGCTCTGCACCCTCTGTGGTGCCGAGATTGCCATCATTGTCTTCTCACCTGGGAAGAAGGTCTTTTCCTTTGGCCACCCTTGCGTCGAGGCTCTCATCGAGCGCTTTGTCACACGAAACCCTCCACCCAGTTCTGGTACGCTGCAGCTTATCGAAGCTCACCGGAATGCTAATGTTCGAGAACTTAATGCTCAACTTACTCAAGTTCTCAACCAACTAGAAATGGAGCGGAAGCGTGGGGAAGAGTTGAACAAACTACGCAAGGCAAGCCAGGCACAATGTTGGTGGGAGCTTCCCATAGAAGAAATGGAAATGCATCAACTAGAACAACTTAAAGCTTCGTTGGATGAGCTAAAGAAGAATGTGACTCAACAAGCAGATCGGATTTTGATTCAGACTTCTTCTAATGCCAATCCCCCGACGCAGTTGATCTTCCCGACTCAGATTCCGACTCAAACATCAACAACAACAAATGGCCCCAACCAGCAACCCGGGCTTTTCGTCGTGGATCCTAAGAACATCATCTCCCATCTTCCCTTCAACTATGGTTCCTATGGATCAAGAGGTTTCTTTTGA

Protein sequence

MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQLIFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF
BLAST of CsGy4G000040 vs. NCBI nr
Match: XP_004150272.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hypothetical protein Csa_4G000530 [Cucumis sativus])

HSP 1 Score: 448.7 bits (1153), Expect = 1.1e-122
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
           IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF
Sbjct: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 228

BLAST of CsGy4G000040 vs. NCBI nr
Match: XP_008454428.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 1.6e-119
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
           IFPTQIP  T TTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF
Sbjct: 181 IFPTQIP--TPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

BLAST of CsGy4G000040 vs. NCBI nr
Match: XP_022942821.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 3.5e-103
Identity = 201/228 (88.16%), Postives = 207/228 (90.79%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKA+Q QCWWELPIEEME+HQLEQLK SLDELKKNVTQQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKANQPQCWWELPIEEMELHQLEQLKLSLDELKKNVTQQADRILIQT-SNGNPPPQ- 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
            FPT  P         PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 FFPTPTPA-------NPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

BLAST of CsGy4G000040 vs. NCBI nr
Match: XP_022149295.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102
Identity = 201/228 (88.16%), Postives = 208/228 (91.23%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELN+QLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNSQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKASQAQ WWELPIEEMEM+QLEQLK SL+ELKKNVTQ ADRIL+QT SN NPP Q 
Sbjct: 121 NKLRKASQAQFWWELPIEEMEMNQLEQLKTSLEELKKNVTQHADRILVQT-SNGNPPPQ- 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
            FPT  P         PNQQ G+FVVDPKN+ISHLP+NYGSYGSRGFF
Sbjct: 181 YFPTPSPA-------NPNQQGGVFVVDPKNMISHLPYNYGSYGSRGFF 219

BLAST of CsGy4G000040 vs. NCBI nr
Match: XP_022975753.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 8.5e-102
Identity = 199/228 (87.28%), Postives = 206/228 (90.35%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLN LEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNHLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKA+Q QCWWELPIEEME++QLEQLK SLDELKKNV QQADRILIQT SN NPP Q 
Sbjct: 121 NKLRKANQPQCWWELPIEEMELYQLEQLKLSLDELKKNVMQQADRILIQT-SNGNPPPQ- 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
            FPT  P         PNQQ G++VVD KN+ISHLP+NYGSYGSRGFF
Sbjct: 181 FFPTPTPA-------NPNQQGGVYVVDQKNMISHLPYNYGSYGSRGFF 219

BLAST of CsGy4G000040 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 104/168 (61.90%), Postives = 134/168 (79.76%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADR 166
           EL K+R+ ++A   WWE P+EE+ + QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

BLAST of CsGy4G000040 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 88/161 (54.66%), Postives = 120/161 (74.53%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQC---WWELPIEEMEMHQLEQLKASLDELKKNV 160
           ++RK S  +    WWE P+EEM M QL+++K +L+EL+K V
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

BLAST of CsGy4G000040 vs. TAIR10
Match: AT4G36590.1 (MADS-box transcription factor family protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 82/168 (48.81%), Postives = 117/168 (69.64%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           +R ++GRQK+EM KM NESNLQVTFSKRR GLFKKASELCTL GAEI +IVFSPG KVFS
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPS-----SGTLQLIEAHRNANVRELNAQLTQVLNQLEMERK 120
           FGHP V+ LI RF   N   +     +  LQL+E   + N++ LN  LT+VL   E E++
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121

Query: 121 RGEELNKLRKA-SQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQ 163
           +   L+ L+++  Q   W+E  +++++M++  QL ++L ++KK + ++
Sbjct: 122 KRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVRE 169

BLAST of CsGy4G000040 vs. TAIR10
Match: AT1G01530.1 (AGAMOUS-like 28)

HSP 1 Score: 114.4 bits (285), Expect = 9.3e-26
Identity = 88/244 (36.07%), Postives = 117/244 (47.95%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQL-TQVLN---------QLE 121
           GHP V  L++  + R           +  H N N  E   +L  Q+LN            
Sbjct: 63  GHPNVNKLLDHSLGR-----------VIRHNNTNFAESRTKLRIQMLNXXXXXXXXXXXX 122

Query: 122 MERKRGEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI----- 181
                        +   A+ WW     E+ + Q   +K  L+ LKK V ++  ++     
Sbjct: 123 XXXXXXXXXXXXXENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRNL 182

Query: 182 --LIQTSSNANPPTQLIFPTQIPT------QTSTTTNGPNQQPGLFVVDPKNIISHLPFN 223
              + +SSN   P   +    I T      Q   +T+ P    G       N+++  P  
Sbjct: 183 NFYVGSSSNVAAPA-AVSGGNISTNHGFFDQNGNSTSAPTLPFGF------NVMNRTPAG 228

BLAST of CsGy4G000040 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23)

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V              
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVXXXXXXXXXXXXXX 121

Query: 121 NKLRKASQAQC-WWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSN 174
                       WW     E+ + Q   +   L +LKK V ++A +++ QT+ N
Sbjct: 122 XXXXXXXXXXXEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPN 173

BLAST of CsGy4G000040 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.0e-50
Identity = 104/168 (61.90%), Postives = 134/168 (79.76%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++KS+GRQK+EMVKM NESNLQVTFSKRRSGLFKKASELCTLCGAE+AI+VFSPG+KVFS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPCVEALIERFVTRN--PPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGE 120
           FGHP V+++I+RF+  N  PP     +QL E  RN+ V++LN  LTQVL+QLE E+K+ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 ELNKLRKASQA-QCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADR 166
           EL K+R+ ++A   WWE P+EE+ + QLE  K +L+ LKK VT +A R
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR 169

BLAST of CsGy4G000040 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39
Identity = 88/161 (54.66%), Postives = 120/161 (74.53%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           ++S GRQK+ MVK+  ES+ QVTFSKRR+GLFKKASELCTLCGAEI IIVFSP KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELN 121
           GHP VE++++R+V+RN    + + QL      A   ELN QLT +L+++E E+K+G+ + 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 178

Query: 122 KLRKASQAQC---WWELPIEEMEMHQLEQLKASLDELKKNV 160
           ++RK S  +    WWE P+EEM M QL+++K +L+EL+K V
Sbjct: 179 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

BLAST of CsGy4G000040 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24
Identity = 88/244 (36.07%), Postives = 117/244 (47.95%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RK+ GR+K+E+VKM NESNLQVTFSKRRSGLFKK SELCTLC AEIAIIVFSP  K +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQL-TQVLN---------QLE 121
           GHP V  L++  + R           +  H N N  E   +L  Q+LN            
Sbjct: 63  GHPNVNKLLDHSLGR-----------VIRHNNTNFAESRTKLRIQMLNXXXXXXXXXXXX 122

Query: 122 MERKRGEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI----- 181
                        +   A+ WW     E+ + Q   +K  L+ LKK V ++  ++     
Sbjct: 123 XXXXXXXXXXXXXENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRNL 182

Query: 182 --LIQTSSNANPPTQLIFPTQIPT------QTSTTTNGPNQQPGLFVVDPKNIISHLPFN 223
              + +SSN   P   +    I T      Q   +T+ P    G       N+++  P  
Sbjct: 183 NFYVGSSSNVAAPA-AVSGGNISTNHGFFDQNGNSTSAPTLPFGF------NVMNRTPAG 228

BLAST of CsGy4G000040 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.3e-24
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           ++K+ GR+KVE+VKM  ESNLQVTFSKR++GLFKKASE CTLC A+IA+IVFSP  KVFS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHP V+ L++ F  R          L E++   +V+ LN   T+V              
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVXXXXXXXXXXXXXX 121

Query: 121 NKLRKASQAQC-WWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSN 174
                       WW     E+ + Q   +   L +LKK V ++A +++ QT+ N
Sbjct: 122 XXXXXXXXXXXEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPN 173

BLAST of CsGy4G000040 vs. Swiss-Prot
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 59/162 (36.42%), Postives = 97/162 (59.88%), Query Frame = 0

Query: 6   GRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFGHPC 65
           GR+K++M  + + +  QVTFSKRR+GLFKKASEL TLC AE+ I+VFSPG K FS+G P 
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEE-LNKLR 125
           ++++ ERF+       SG  +    +R   ++ L+ +L  +  ++E E++RGE+   KL 
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYR-PKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 126 KASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRI 167
            A   +  ++  IE + + +L + K  L  +   +  Q + +
Sbjct: 122 SAGDER--FKESIETLTLDELNEYKDRLQTVHGRIEGQVNHL 160

BLAST of CsGy4G000040 vs. TrEMBL
Match: tr|A0A0A0KWA9|A0A0A0KWA9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 7.6e-123
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
           IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF
Sbjct: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 228

BLAST of CsGy4G000040 vs. TrEMBL
Match: tr|A0A1S3BYP6|A0A1S3BYP6_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119
Identity = 225/228 (98.68%), Postives = 225/228 (98.68%), Query Frame = 0

Query: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60
           MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS
Sbjct: 1   MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120
           FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL
Sbjct: 61  FGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 120

Query: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180
           NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL
Sbjct: 121 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 180

Query: 181 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
           IFPTQIP  T TTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF
Sbjct: 181 IFPTQIP--TPTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 226

BLAST of CsGy4G000040 vs. TrEMBL
Match: tr|A0A1Q3BV83|A0A1Q3BV83_CEPFO (SRF-TF domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15288 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 6.5e-74
Identity = 158/228 (69.30%), Postives = 183/228 (80.26%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           RKS+GRQKVEMVKM NESNLQVTFSKRR+GLFKKASELCTLCGAEIAI+VFSPGKKVFSF
Sbjct: 1   RKSKGRQKVEMVKMNNESNLQVTFSKRRTGLFKKASELCTLCGAEIAIVVFSPGKKVFSF 60

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQL-IEAHRNANVRELNAQLTQVLNQLEMERKRGEEL 121
           GHPCVE++I+RF+TRNP P S T+QL IEAHRNANVRELNAQLTQVLNQLE E +RGEEL
Sbjct: 61  GHPCVESIIDRFLTRNPTPPSDTVQLNIEAHRNANVRELNAQLTQVLNQLEAENRRGEEL 120

Query: 122 NKLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQL 181
           N+LRKA+QAQCWW+ P+EE+ M QL QLKASLD+LKKNV +Q DR+LIQ+S   NPP   
Sbjct: 121 NQLRKANQAQCWWQAPVEELTMPQLVQLKASLDDLKKNVAKQVDRLLIQSS---NPPQ-- 180

Query: 182 IFPTQIPTQTSTTTNGPNQQPGLFVVDPKNIISHLPFNYGSYGSRGFF 229
            FP       S+++  P  +P   V    N++ H    +  YGSRGFF
Sbjct: 181 FFP------GSSSSGNPPFEPKNNVGFNPNMVPH--GYHPGYGSRGFF 215

BLAST of CsGy4G000040 vs. TrEMBL
Match: tr|A0A067EEZ4|A0A067EEZ4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039654mg PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.5e-74
Identity = 152/225 (67.56%), Postives = 182/225 (80.89%), Query Frame = 0

Query: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
           +KS+GRQKVEMVKMPNESNLQVTFSKRR+GLFKKASELCTLCGA+IAIIVFSPGKKVFSF
Sbjct: 7   KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 66

Query: 62  GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELN 121
           GHPCVE +++R++TRNPP  SGT+QLIEAHRNA+VRELN QLTQVLNQLE+E+KRGEELN
Sbjct: 67  GHPCVETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEELN 126

Query: 122 KLRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPPTQLI 181
           ++RKASQAQCWWE PIEE+ + QLEQLK SL+ELKKNV +QA+++LIQ+S   NPP    
Sbjct: 127 QMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEKMLIQSS---NPP---- 186

Query: 182 FPTQIPTQTSTTTNG------PNQQPGLFVVDPKNIISHLPFNYG 221
              Q    +S+   G      PN    +F  +P N++ H  +N G
Sbjct: 187 ---QFFAGSSSNAGGMNLPFDPNNNAAVF--NPNNMMPHPGYNPG 219

BLAST of CsGy4G000040 vs. TrEMBL
Match: tr|A0A2N9GC17|A0A2N9GC17_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24556 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.5e-73
Identity = 142/175 (81.14%), Postives = 162/175 (92.57%), Query Frame = 0

Query: 3   KSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFG 62
           KS+GRQK+EMVKM N+SNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFG
Sbjct: 5   KSKGRQKIEMVKMMNDSNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSFG 64

Query: 63  HPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELNK 122
           HPCVE +I+RF+TRNPP +SGTLQLIEAHRNA+VRELN QLTQV NQLE+E+KRG+ELN+
Sbjct: 65  HPCVETVIDRFLTRNPPQNSGTLQLIEAHRNASVRELNMQLTQVTNQLEVEKKRGDELNR 124

Query: 123 LRKASQAQCWWELPIEEMEMHQLEQLKASLDELKKNVTQQADRILIQTSSNANPP 178
           +RK+SQAQCWWE PIEE+ + QLEQLK SL+ELKKNV +QADR+LIQ   N+NPP
Sbjct: 125 MRKSSQAQCWWESPIEELGLPQLEQLKVSLEELKKNVAKQADRLLIQ---NSNPP 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150272.11.1e-122100.00PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hyp... [more]
XP_008454428.11.6e-11998.68PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
XP_022942821.13.5e-10388.16agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous... [more]
XP_022149295.11.3e-10288.16agamous-like MADS-box protein AGL62 [Momordica charantia][more]
XP_022975753.18.5e-10287.28agamous-like MADS-box protein AGL62 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G60440.11.7e-5161.90AGAMOUS-like 62[more]
AT2G24840.12.3e-4054.66AGAMOUS-like 61[more]
AT4G36590.12.2e-3548.81MADS-box transcription factor family protein[more]
AT1G01530.19.3e-2636.07AGAMOUS-like 28[more]
AT1G65360.14.6e-2541.38AGAMOUS-like 23[more]
Match NameE-valueIdentityDescription
sp|Q9FKK2|AGL62_ARATH3.0e-5061.90Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=... [more]
sp|Q4PSU4|AGL61_ARATH4.1e-3954.66Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=... [more]
sp|Q9LMM8|AGL28_ARATH1.7e-2436.07Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=... [more]
sp|O80807|AGL23_ARATH8.3e-2441.38Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=... [more]
sp|O64703|AGL29_ARATH1.8e-1836.42Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KWA9|A0A0A0KWA9_CUCSA7.6e-123100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1[more]
tr|A0A1S3BYP6|A0A1S3BYP6_CUCME1.0e-11998.68agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4... [more]
tr|A0A1Q3BV83|A0A1Q3BV83_CEPFO6.5e-7469.30SRF-TF domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 G... [more]
tr|A0A067EEZ4|A0A067EEZ4_CITSI8.5e-7467.56Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039654mg PE=4 SV=1[more]
tr|A0A2N9GC17|A0A2N9GC17_FAGSY5.5e-7381.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24556 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033896MADS_MEF2-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G000040.1CsGy4G000040.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availableCOILSCoilCoilcoord: 138..165
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 4..176
NoneNo IPR availablePANTHERPTHR11945:SF185AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATEDcoord: 4..176
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 7..27
score: 46.13
coord: 42..63
score: 41.44
coord: 27..42
score: 67.1
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..64
e-value: 1.7E-30
score: 117.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 16..61
e-value: 4.3E-24
score: 83.6
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 5..65
score: 23.549
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 17..97
e-value: 1.5E-26
score: 94.2
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 6..78
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 6..73
e-value: 1.26974E-33
score: 116.498