Carg08041 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08041
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_050 : 366945 .. 374285 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTAAATGTATGTCCGATTTAAACTATAATTTAATCTGCTTATCAGTTGGGTTTCTTTCAGATTACTAGTGGGTGAAAAATTCGCGGGCTAGGAGAGGCGGCGGCAGCGACGGGGACGATCCGATTCCCCAATCTGAATCTCGAACTTTTTCCTCACGAAACCACAGCGCTGGTGGCTAATAGTCCGATTCCTAAGTGAAACTCGGTTAGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAATGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAACAGATCCACGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGTATGTTTTTCCTTTTCTCTTTCTTCCATCTTGTTGTTTACGGATCGAATTGTATATTTTATAGGTAGTCTGTGAGTTTCAAATTCAATTCGATCTCTGAGTAGATAAGGATTGAAAATGTGTCCTCGGATAGGATTAGGGTTAGGGTTAGGGTCTAATTTGTTCGATCGATTTGGCTAATATTCGGATTTTGGTCAATATGGCGTTTCAGGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCTAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGTACTGTTACACTCGTTGTCTCTGTTCTATTAATTTGTGTGCTTTGGCTATGTCTTCGGTGCTCAATCATGGTTTTGTTGCATTTTTGTGTTGTTTTTACAGGAAGCGGCTGTCCCAGGAGCTCTGTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTGTTCAGATGGCTATGATTCGCAAGACTGTAAGTTCCCATTTTTCTTTCTTCCCTGCTGTTTTATTTTCTCCTTTATCGCAAAACAATCCTACAATCCTATTAAGCATTGGCTGTGAAAATTATATGGAAATATTCTTCTTCCATTCATTCTTGTACAGTGAAACTCTCTAAACTTATATGTTAGCTTGTCTATGGACACTTGTTGGTAGTGTAACGAAACAGATTAAGCCCACTGTAAGCAGATATTGTCCGCTTTGACCCGTTACGTATCGTCGTCAGCCTCAAAGTTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACTCTTATGAAAAAATTACTTTGTTCCCCTTTCCTTTCCAATCGATGTGAGATCTCAATCCACCCTCTTTCAGGGTCCAGTGCTCTCGCTGGCACTCATTCCCCTAGCAGATACGTTTTAAAATCGTGAGGCTGACGGCGATACATAACGAGCTAAAGCGGATAATATCTGCTAGCGGTGGGCTTGAGCGGTTTACATGCAAGATCTTTCCTTTCCTTGTTTGATTTGAAGAATTGATTTGAGGGTTTTTTTCTTCTCTCCATACATATTTATAGGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACATAGTAAATCTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAGCATGGTCACGACAAGACTTCAAAACATGATGATAATTCTTACTCCGAAGATAGGAGGAGAACTGATTATAAGAATGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCCGAAGGTAGGAGTAGAACTAATTATAAGAATGAGAGGGATCATAAAGACGAACGTGAAAAGAGCTCAAGACATGATGATCATTCTTATTCCGAAGATAAGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATCCAGAAGATAGAAGGAGAAGAAATGATTATAAGAACGAGAGGGACCATGACAGAGGCTCGAAATATGCTGCACAAACGACGTACGATCAGTCAGATCGAAAGTCATCCAAAATCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAAGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCTTTTCGACGGTAATGCACATCACTTATACACTTTCCTTATGGTTATTGTATAACATCCTTTTTTAGTGTTTCTGCTGCTGTTGACCCTGAAGAATTGCTTCTTGTGAAAACATTTGGAGTTCATGTATTTGTATTATCTTTTCAATCCATTAGTATTATACTTATCTATAGTGAAATTTGTACTAAATTAATAGCAAAATTGTGATCATTATGGAACAAAAGTCATTTCATGTTACTTTTTGATCTCGTTTACATAATTCTTGATGATTTTTTGTCCTCTCTTTCAGCACCATTCCTCAAGGCTAAATTTTCATGTTTTTTTTTTTTTTCAAATATCAGAAGGATGGAGTGATAGTATAGTCCACCGTCGATGAAGCCGAAGGAGCTGGAGGCTTTCGATGCATCGGTCGAAAGATTGAGCTGGAGTAATAATATTGCTTTGGTCACTTGAAGGATTAAGACGTGTGGAAATACTCAAGGAAAGCAAAAGTGAACGTAATTTACAAAGTTGTTCCTACTTACAAGCTTAAAACGAATCAGTGCAAAAGAAATAAGACCAACACGTAAAAGTATAGCTACTCTTGTGTGTGGGGCACTAGCATTAGAAGAACAACACATGTCGGTCTCCCAACTTTGTTAGAATGCATTGTTTGTGTTTTGTTTAGCGCATGAAAATTAAGGTGCAATAAGTTGACAAAAGTCTAGCCTTTACCTAAAATTTCGTTTCACTGCCTCACTTGTTTTACGTTCCCTTCCTTATTTTATTTTCATCGCAACATATCCAAACTATATTTTTATCTATACTAACTCTAGAGTACAAGATCAATATAAGTTTTGATTGTTAAATGTCTAGAATTATTATAATTGTTTTCTTGTGGGTAAATCCTAGAACTTTTCAGGTAGTACTTGTTAGCGTGTTGGTTTATATCTGAGTCGACGTACTGGGCAACTACTACCTTTTGTGTGATGCTATTATTTCATCGCTTCATTTTCTTACCAATTGTACCCGCCTCATCATTACTTTACCACTGCATAACACCGTGTTCACAACGACGAGTTTGTCCACGTCACCTCTTTAAAATCGTTAGATTTACAATTTCTCTTATATATATATATATATATATTAATATTGTTGGAAGTACTTCACCTTTTAAGATAAGCAATGCAGTGACTAAATGAAGTGTTAACATCTCAGTTAAATGGGCCAGGGTCCACTATGCCCAGAATGACAGGTCCACATAAAAAGTAAAATATTTGTATTTTCAAATCCCATCCGTGAAGGGGTTGAACTGCGAATATTTAGAAATTTAAGGGAAAATAAGAAATTTCAGAAAGTTCTGTGGTGAAAAACGCGAATTTCAAACATTTTTCTCGTTCTTCAGTTCTACAAATCTTTATTTCATCTTCTGCCTTTTGTCGTCGACTTCATCACTCTCTTCCTTTTCGTCTCTCTCGTTTCTGCCCTTTGGATCGCCCACCGGTCTGAATTACCTTGACCGGTTCTAATCCGGTTGCGCTTTTCCCCTTTCTAGATCAGCATTCCACCAACAATCATGAATCCTGAGTAGTAAGTCGCGTTATTGATCGAATCTTTTTCAAGCGATTCCCGTATGTGAATAACTTTTGATTTTGTTTTGTTTTGTTTTGTTTCGTTTGGCGACAATGATCCATTAGGGTAGTTTCAATAACTAGGTTTCAGTTTTTCTTTCTCCTTTGTTTGATGCTTGTTTTTTTTTTTATATATACATATATACATATTCTGTCAATTTAAGGATTAGATCTGTGATTCTCATTTTTCTTTGTAATGAACGATTTTCTCTTGAGGTGGATGAATTCGATTGTTTTTGGATTGATCGAATCTTCTAATTCAAAGCTCTTGTTCGGTTAAGTAAAACAGAATTCAGAGCGTTCTTATTTTTGATTGGTCGACAAACCATTGAATTGAATTGAATTTTATGTAGATAGGAGGGGGCCAATTACCTTTTAGCTTCTCTTAAATTCAAAACGTATATATAATACCCTTGAAATTCTATTGTTTTCCACCAATTGGTCTCCCTAAAATGTTTAGTGTTGAGATTATCTATGAAAATTTTGCCTTTTCTGAAAATTTCGAACTTGACCTCTTCATGGATGGCATTTTTTTCTTTGTTCTGTGTATGGATATGGACTTTGGTTCTCTTGGATGCGAAGGCATTAGGGCATCATATATTTTTTATAAATAAATGAAAATTTGATAAGTTACAATTCTCTTTGTCCCTATTGGTTTGATTTTTACTAATTTGCCTTTTCAGTGTTTGAATTATTAACATTGTTCGTCGAGCTGGACGACTGCTTGCTTTGTTATTTAGTTTTAAGTTTATTTTATTCAAGCAAATGATTATTAATTAAATCAGTTGCTTAAGAATGTAGAACAGATACCTACCCAGATAAATTTTCATCGTAGGCTGTGGATGTTCATGATTGTAACTTTTAAGTAATTTTGTTTGTAACATTTGAGTTTTTTTTATTTTTCTAATTTGGTTTTCTCTGATAGTGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTTTTGAGATTTGCTGTAAGATTCATTACTCTATCATCGTCTGTTCAACATTTGTAACTCTTAGGTTACACGCTTCATCTTCATTAAAATCGATTTTTGATTACCTCTAGATTATTATGTTATGAATTACTGAATGTTGACACCTAGTGCTTGTTATATATCCATTCGAACTGCGTAGATCCAAAGCGGCAAAGCAAATGAAATGTATGTTTGAATTAGAAAGTTTCAGAAGTTTTTTCAAACAAGAGATGGAGAGTTGGGAATTATATATTGTAGTGGAAGGTTTTGGATCCGACAGCTCCTTGATCTTTTTCACTATTGTGATAATTGTGGCATGACATCTCATGATACTGAAGAAATTGCTTTCTTGTTCTTCCATTTTGACAGTTATTAAATTGCCTACTTGTCAAGGGTTTTTCTTGTTTGGATAGTTGCTTTCTTGGAGCTTCATCTACTGAATGGTTTCTTTTGTATCTTATGAACAGGATGACTCATATCTGGATAGTTATATTAGTACCATTGGAGTTGATTTTGTAAGCTTTTATGATCCTTTAAGTTCAAACCCGTTCTGTTTTAATTATGTATGTGCGCTCTGATCACTTAAGGATTTTGATGTTCTAGAAAATACGCACCGTGGAGCAGGATGGAAAGACAATTAAACTCCAAATTGTGAGACTTTCTCTCTACACGTGCACACACACACGTATATATATATTGTGACACACGTATATATATATTGTGACACACACGTATATATATATATTGTGACACACACGTATATATATATATATATTTGTGACACACACGTATATATATATATATATATATATATATATTGTGACACACACGTATATATATATTGTGACACACGTATATATATTGTGACACACACATACATACATAGGCTTTCTGCAAGTCCTCTTTTCTGACTTCTGGAGTATTCAGTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGCGGGGCACATGGCATAATAGTAAGTTTTATGCATTATAGCTCTGGTATAGCAACTTTTCTCTAATCACAGAACTCTGAGTTCGTTTCCTTCGTTGGTTCAGATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTTAAGCAATGGTTAAACGAAATTGACCGTTATGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTCTGATCTTCCTAATAAAGTAGTGTCCTATGAATCAGCAAAGGTAAAAGCGATTTGTCGACTTAAATTACTGAAAGCCTTGGAGGCATGAGAAACCGAGTAAAATTCTTTTGATGATCTCACATGTATGTAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGTGCAAAAGATGCTACCAATGTAGAACAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGTATATCTCCCTCTCTTGTGTACTAGTGGGCAGAATTTCAATTGCATGTGTAACGGCTCTAAATTTCTACTTAAGTTAAAGTACGTACGGTATACATATCAATATCATTTTATACGAAAATAATCATTTAAAACTGTATACAGTTGAGATTTTAGGTTAAGTAGCAATCTAGGGTCGTTACACAATGACACAAAAAAAAAAAAAAAAAAACCAAATATTTCAACTTAGTTTCGTTATGTAGACCACTTGAACAATTACTAATCTTCATGCTCTGCATCCAGGATGGCAAGTCTGCCTGCAAACAATGCGAGGCCACCGACGGTGCAGCTACAGGGGCAACCCGTCAACCAGAAGGGTGGATGTTGTTCTTAGTTGGTTGTTTCTGCCATTGCAAGTGTGCATTGTGCACGTAATATCAAGTGCATTCGAATCTCTCTCTATAAAGTATCTGAAATCCCATTCATTTCAAATAGACCTTGAATTGTCACTCTATACCTTTCTGTATTATCAAAGCAGTAGTATTTCCTTTTTCTTCTTTCCAATACTTGTTTTAAGCTGCCGTGTAGGGAACTTTTAGAGGTACAGTTCAAGCCATCTCTCAGTTTATTTGCCTCATTAATATTTGTTTGGAGAATGCTTGGATGCTTTATGTTTCTGACTTTAGATAGCAAATGGTAGAGCTTAAGAATGCTCAAATTTGTCTT

mRNA sequence

TCTTTAAATGTATGTCCGATTTAAACTATAATTTAATCTGCTTATCAGTTGGGTTTCTTTCAGATTACTAGTGGGTGAAAAATTCGCGGGCTAGGAGAGGCGGCGGCAGCGACGGGGACGATCCGATTCCCCAATCTGAATCTCGAACTTTTTCCTCACGAAACCACAGCGCTGGTGGCTAATAGTCCGATTCCTAAGTGAAACTCGGTTAGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAATGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAACAGATCCACGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCTAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGAAGCGGCTGTCCCAGGAGCTCTGTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTGTTCAGATGGCTATGATTCGCAAGACTGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACATAGTAAATCTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAGCATGGTCACGACAAGACTTCAAAACATGATGATAATTCTTACTCCGAAGATAGGAGGAGAACTGATTATAAGAATGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCCGAAGGTAGGAGTAGAACTAATTATAAGAATGAGAGGGATCATAAAGACGAACGTGAAAAGAGCTCAAGACATGATGATCATTCTTATTCCGAAGATAAGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATCCAGAAGATAGAAGGAGAAGAAATGATTATAAGAACGAGAGGGACCATGACAGAGGCTCGAAATATGCTGCACAAACGACGTACGATCAGTCAGATCGAAAGTCATCCAAAATCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAAGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCTTTTCGACGTGTTTCTGCTGCTGTTGACCCTGAAGAATTGCTTCTTGTGAAAACATTTGGAGTTCATTCCACCGTCGATGAAGCCGAAGGAGCTGGAGGCTTTCGATGCATCGGTCGAAAGATTGAGCTGGATGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTTTTGAGATTTGCTGATGACTCATATCTGGATAGTTATATTAGTACCATTGGAGTTGATTTTTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGCGGGGCACATGGCATAATAATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTTAAGCAATGGTTAAACGAAATTGACCGTTATGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTCTGATCTTCCTAATAAAGTAGTGTCCTATGAATCAGCAAAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGTGCAAAAGATGCTACCAATGTAGAACAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGATGGCAAGTCTGCCTGCAAACAATGCGAGGCCACCGACGGTGCAGCTACAGGGGCAACCCGTCAACCAGAAGGGTGGATGTTGTTCTTAGTTGGTTGTTTCTGCCATTGCAAGTGTGCATTGTGCACGTAATATCAAGTGCATTCGAATCTCTCTCTATAAAGTATCTGAAATCCCATTCATTTCAAATAGACCTTGAATTGTCACTCTATACCTTTCTGTATTATCAAAGCAGTAGTATTTCCTTTTTCTTCTTTCCAATACTTGTTTTAAGCTGCCGTGTAGGGAACTTTTAGAGGTACAGTTCAAGCCATCTCTCAGTTTATTTGCCTCATTAATATTTGTTTGGAGAATGCTTGGATGCTTTATGTTTCTGACTTTAGATAGCAAATGGTAGAGCTTAAGAATGCTCAAATTTGTCTT

Coding sequence (CDS)

ATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAATGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAACAGATCCACGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCTAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGAAGCGGCTGTCCCAGGAGCTCTGTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAAAAACAATCCTGTTCAGATGGCTATGATTCGCAAGACTGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACATAGTAAATCTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAGCATGGTCACGACAAGACTTCAAAACATGATGATAATTCTTACTCCGAAGATAGGAGGAGAACTGATTATAAGAATGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCCGAAGGTAGGAGTAGAACTAATTATAAGAATGAGAGGGATCATAAAGACGAACGTGAAAAGAGCTCAAGACATGATGATCATTCTTATTCCGAAGATAAGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATCCAGAAGATAGAAGGAGAAGAAATGATTATAAGAACGAGAGGGACCATGACAGAGGCTCGAAATATGCTGCACAAACGACGTACGATCAGTCAGATCGAAAGTCATCCAAAATCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGCTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAAGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCTGAGAAGGGAGGAAGCTCAACGATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCTTTTCGACGTGTTTCTGCTGCTGTTGACCCTGAAGAATTGCTTCTTGTGAAAACATTTGGAGTTCATTCCACCGTCGATGAAGCCGAAGGAGCTGGAGGCTTTCGATGCATCGGTCGAAAGATTGAGCTGGATGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTTTTGAGATTTGCTGATGACTCATATCTGGATAGTTATATTAGTACCATTGGAGTTGATTTTTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGCGGGGCACATGGCATAATAATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTTAAGCAATGGTTAAACGAAATTGACCGTTATGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTCTGATCTTCCTAATAAAGTAGTGTCCTATGAATCAGCAAAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGTGCAAAAGATGCTACCAATGTAGAACAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGATGGCAAGTCTGCCTGCAAACAATGCGAGGCCACCGACGGTGCAGCTACAGGGGCAACCCGTCAACCAGAAGGGTGGATGTTGTTCTTAG

Protein sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVDKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKNPDHKRDRKKHRHSKSKHFSPERDHDSEDASPERQRRKHGHDKTSKHDDNSYSEDRRRTDYKNERDHKDDRDKSSRHDDHSYSEGRSRTNYKNERDHKDEREKSSRHDDHSYSEDKRRTDYKNERDHKDDRDKSSRHDDHSYPEDRRRRNDYKNERDHDRGSKYAAQTTYDQSDRKSSKINSHDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERAARLREMQQDAELHEEQRWKRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGSSTIEESIRRRTYYSQGKSDIEANAFRRVSAAVDPEELLLVKTFGVHSTVDEAEGAGGFRCIGRKIELDDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDLPNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPTVQLQGQPVNQKGGCCS

Homology

[Close]

BLAST of Carg08041 vs. NCBI nr
Match: XP_022942621.1 (pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 499/504 (99.01%), Postives = 502/504 (99.60%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTVEGEKHKEK XXXXXX
Sbjct: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKINSHDSAE 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSK +SHDSAE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKTHSHDSAE 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420
           R+HDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX
Sbjct: 361 RYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 505
           EESIRRRTYYSQGKSDIEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSDIEANAFRR 504

[Close]

BLAST of Carg08041 vs. NCBI nr
Match: XP_022942620.1 (pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 499/504 (99.01%), Postives = 502/504 (99.60%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTVEGEKHKEK XXXXXX
Sbjct: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKNXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKINSHDSAE 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSK +SHDSAE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKTHSHDSAE 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420
           R+HDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX
Sbjct: 361 RYHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 505
           EESIRRRTYYSQGKSDIEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSDIEANAFRR 504

[Close]

BLAST of Carg08041 vs. NCBI nr
Match: XP_022989313.1 (pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 515.8 bits (1327), Expect = 2.4e-142
Identity = 479/504 (95.04%), Postives = 481/504 (95.44%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           KLPSANDAWRKLHSDPLLIIRQREQQALARV+NNP+QMAMIRKTVEGEKHKEK XXXXXX
Sbjct: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXX            SKHDDNSYSEDRR TDYKNE   
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXERQRRKHGHDKSSKHDDNSYSEDRRITDYKNE-RD 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKINSHDSAE 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AAQTTYDQSD KSSK NSHDSAE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQTTYDQSDLKSSKTNSHDSAE 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420
           RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX
Sbjct: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 505
           EESIRRRTYYSQGKSDIEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSDIEANAFRR 503

[Close]

BLAST of Carg08041 vs. NCBI nr
Match: XP_022989323.1 (pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 515.8 bits (1327), Expect = 2.4e-142
Identity = 479/504 (95.04%), Postives = 481/504 (95.44%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD
Sbjct: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           KLPSANDAWRKLHSDPLLIIRQREQQALARV+NNP+QMAMIRKTVEGEKHKEK XXXXXX
Sbjct: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXX            SKHDDNSYSEDRR TDYKNE   
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXERQRRKHGHDKSSKHDDNSYSEDRRITDYKNE-RD 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKINSHDSAE 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AAQTTYDQSD KSSK NSHDSAE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQTTYDQSDLKSSKTNSHDSAE 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420
           RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX
Sbjct: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 505
           EESIRRRTYYSQGKSDIEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSDIEANAFRR 503

[Close]

BLAST of Carg08041 vs. NCBI nr
Match: XP_023545201.1 (pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.7 bits (1184), Expect = 9.3e-126
Identity = 463/505 (91.68%), Postives = 465/505 (92.08%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERL+FLYESGLAVGKASESDGFKSLETLP TSTPAASSDPSSSKEAAVPGALFVD
Sbjct: 61  LVPKQERLEFLYESGLAVGKASESDGFKSLETLPITSTPAASSDPSSSKEAAVPGALFVD 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTVEGEKHKEK  XXXXX
Sbjct: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEGEKHKEKKPXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
           XXXXXXXXX        XXXXXXXXXXXXXXXXXXXX              TDYK  XXX
Sbjct: 181 XXXXXXXXXKHFSPERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDYKXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKY-AAQTTYDQSDRKSSKINSHDSA 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SKY AAQTTYDQSDRKSSKINSHDS 
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKYAAAQTTYDQSDRKSSKINSHDST 360

Query: 361 ERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXX 420
           ER          SYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXX
Sbjct: 361 ERXXXXXXXXXXSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSST 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSST
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSST 480

Query: 481 IEESIRRRTYYSQGKSDIEANAFRR 505
           IEESIRRRTYYSQGKSDIEANAFRR
Sbjct: 481 IEESIRRRTYYSQGKSDIEANAFRR 505

[Close]

BLAST of Carg08041 vs. TAIR10
Match: AT1G02130.1 (RAS 5)

HSP 1 Score: 305.1 bits (780), Expect = 1.2e-82
Identity = 157/197 (79.70%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYDVTD+ESF NVKQWL+EIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPA-NNARPP 725
             N+ + YE+AKAFADE+GIPFMETSAKDATNVEQAFMAM+A IK RMAS PA NNARPP
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

[Close]

BLAST of Carg08041 vs. TAIR10
Match: AT5G47200.1 (RAB GTPase homolog 1A)

HSP 1 Score: 303.1 bits (775), Expect = 4.5e-82
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+ YDVTD ESF NVKQWLNEIDRYASENVNKLLVGNK+DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 666 PN-KVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPT 725
            + KVVS E+AKAFADE+GIPF+ETSAK+ATNVE+AFMAMTA IK RMAS PA  A+PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

[Close]

BLAST of Carg08041 vs. TAIR10
Match: AT4G17530.1 (RAB GTPase homolog 1C)

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-81
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+ YDVTD ESF NVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 PN-KVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPT 725
            + KVVS E+AKAFADE+GIPF+ETSAK+ATNVE+AFMAMTA IK RMAS PA  ++PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

[Close]

BLAST of Carg08041 vs. TAIR10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 252.3 bits (643), Expect = 9.1e-67
Identity = 132/198 (66.67%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYD T+ ESF NVKQWL+EIDRYA+E+V KLL+GNK+D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANN--ARP 724
             +KVVS E+ +A ADE+GIPF+ETSAKD+ NVEQAF+ +  +IK +M S    N  + P
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

[Close]

BLAST of Carg08041 vs. TAIR10
Match: AT2G44200.1 (CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor)

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-54
Identity = 116/168 (69.05%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           M +KFLNKKGWHTGSLRNIE VWKAEQK EAEQKKLEELR QI +E+ER EFR LQEQAG
Sbjct: 1   MGMKFLNKKGWHTGSLRNIETVWKAEQKQEAEQKKLEELRLQILQERERSEFRALQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSL--ETLPSTSTPAASSDPSSSKEAAVPGALF 120
           L+P+QERL+FLY+SGLAVGK S S    S   E  P   + A SS  S   + + PGALF
Sbjct: 61  LIPRQERLEFLYDSGLAVGKGSASGSGVSFQKEEQPLAKSEAGSS-ASEKPDQSAPGALF 120

Query: 121 VDKLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVE 167
            +K  SAND+WRKLHSDPLL+IRQREQ+ALA++KNNPV+MA+IRK+VE
Sbjct: 121 EEKAQSANDSWRKLHSDPLLLIRQREQEALAKIKNNPVKMALIRKSVE 167

[Close]

BLAST of Carg08041 vs. Swiss-Prot
Match: sp|P28188|RAD2A_ARATH (Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-81
Identity = 157/197 (79.70%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYDVTD+ESF NVKQWL+EIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPA-NNARPP 725
             N+ + YE+AKAFADE+GIPFMETSAKDATNVEQAFMAM+A IK RMAS PA NNARPP
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

[Close]

BLAST of Carg08041 vs. Swiss-Prot
Match: sp|Q9FPJ4|RAD2B_ARATH (Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 8.1e-81
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+ YDVTD ESF NVKQWLNEIDRYASENVNKLLVGNK+DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 666 PN-KVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPT 725
            + KVVS E+AKAFADE+GIPF+ETSAK+ATNVE+AFMAMTA IK RMAS PA  A+PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

[Close]

BLAST of Carg08041 vs. Swiss-Prot
Match: sp|Q05737|YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-80
Identity = 160/197 (81.22%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYDVTDQESF NVKQWLNEIDRYAS+NVNKLLVGNKSDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLP-ANNARPP 725
             NKVV+ E+AKAFADE+GIPFMETSAK+ATNV+QAFMAM A IK+RMAS P A NARP 
Sbjct: 126 TANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPA 185

[Close]

BLAST of Carg08041 vs. Swiss-Prot
Match: sp|Q9SEH3|RAD2C_ARATH (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-80
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+ YDVTD ESF NVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 PN-KVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPT 725
            + KVVS E+AKAFADE+GIPF+ETSAK+ATNVE+AFMAMTA IK RMAS PA  ++PPT
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

[Close]

BLAST of Carg08041 vs. Swiss-Prot
Match: sp|P40392|RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-78
Identity = 153/197 (77.66%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+VYDVTDQESF NVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNA-RPP 725
             N+VVSYE+ KA ADE+GIPF+ETSAKDATNVE+AFM M  +IKNRMAS PA NA +P 
Sbjct: 126 AENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185

[Close]

BLAST of Carg08041 vs. TrEMBL
Match: tr|A0A0A0KU62|A0A0A0KU62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025080 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 4.6e-97
Identity = 371/505 (73.47%), Postives = 385/505 (76.24%), Query Frame = 0


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKAS SDGFKSLETLPS+ST AA       KEAAVPGALF D
Sbjct: 61  LVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAXXXXXXXKEAAVPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVKNNPVQMAMIRKTVEGEKHKEKXXXXXXX 180
           K  SAND WRKLHSDPLLIIRQREQQALARVKNNP+QMAMIRKTV               
Sbjct: 121 KPHSANDTWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTV--------------- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHDDNSYSEDRRRTDYKNEXXX 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKYAAQTTYDQSDRKSSKINSHDS-A 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SKYAA+T+YDQSDRK+ K N HDS A
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKYAARTSYDQSDRKTFKSNPHDSAA 360

Query: 361 ERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLXXXXXXXX 420
           +R+HDRSKR+RDSYA N++ SRRVGE R YE NASETP+ESRH+HRRP T  XXXXXXXX
Sbjct: 361 DRYHDRSKRDRDSYATNDRDSRRVGELRYYESNASETPNESRHRHRRPTT-XXXXXXXXX 417

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAVPSSKNFLDAAQKSMYGAEKGGSST 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AVPSS+NFLD AQK MY AEKGGSST
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPSSRNFLDMAQKRMYSAEKGGSST 417

Query: 481 IEESIRRRTYYSQGKSDIEANAFRR 505
           IEESIRRRTYYSQGKS IEANAFRR
Sbjct: 481 IEESIRRRTYYSQGKSQIEANAFRR 417

[Close]

BLAST of Carg08041 vs. TrEMBL
Match: tr|A0A1S3BWQ8|A0A1S3BWQ8_CUCME (ras-related protein RABD2a-like OS=Cucumis melo OX=3656 GN=LOC103494456 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-90
Identity = 175/195 (89.74%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPTV 725
           PN+ VSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMAS PANNARPPTV
Sbjct: 126 PNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQPANNARPPTV 185

[Close]

BLAST of Carg08041 vs. TrEMBL
Match: tr|A0A0A0KUE5|A0A0A0KUE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025060 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-90
Identity = 175/195 (89.74%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPTV 725
           PN+ VSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMAS PANNARPPTV
Sbjct: 126 PNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQPANNARPPTV 185

[Close]

BLAST of Carg08041 vs. TrEMBL
Match: tr|A0A251QMC8|A0A251QMC8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G271800 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 8.7e-88
Identity = 166/180 (92.22%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFWDTAGQERFRTITSSYYRGA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFWDTAGQERFRTITSSYYRGA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFWDTAGQERFRTITSSYYRGA 65

Query: 606 HGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL-PNKVVSYESAKAFAD 665
           HGIIIVYDVTDQESF NVKQWLNEIDRYASENVNKLLVGNK+DL  NKVVSYE+AKAFAD
Sbjct: 66  HGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKADLTANKVVSYETAKAFAD 125

Query: 666 EVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPTVQLQGQPVNQKGGCCS 725
           E+GIPFMETSAK+ATNVEQAFMAM A+IKNRMAS P NNARPPTVQ++GQPVNQK GCCS
Sbjct: 126 EIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPMNNARPPTVQIRGQPVNQKSGCCS 185

[Close]

BLAST of Carg08041 vs. TrEMBL
Match: tr|W9RPK9|W9RPK9_9ROSA (Ras-related protein RABD2c OS=Morus notabilis OX=981085 GN=L484_024030 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 6.9e-85
Identity = 166/196 (84.69%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 546 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF----------------WDTA 605
           DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF                WDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 606 GQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKSDL 665
           GQERFRTITSSYYRGAHGII+VYDVTDQESF NVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 666 -PNKVVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASLPANNARPPT 725
             NKVVSYE+AKAFADE+GIPFMETSAKDATNVEQAFMAM A+IKNRMAS P NNARPPT
Sbjct: 126 TANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAEIKNRMASQPMNNARPPT 185

The following BLAST results are available for this feature:

BLAST of Carg08041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942621.1	1.9e-147	99.01	pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita moschata]	[more]
XP_022942620.1	1.9e-147	99.01	pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita moschata]	[more]
XP_022989313.1	2.4e-142	95.04	pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita maxima]	[more]
XP_022989323.1	2.4e-142	95.04	pre-mRNA-splicing factor cwc25-like isoform X2 [Cucurbita maxima]	[more]
XP_023545201.1	9.3e-126	91.68	pre-mRNA-splicing factor cwc25-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08041 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02130.1	1.2e-82	79.70	RAS 5	[more]
AT5G47200.1	4.5e-82	79.59	RAB GTPase homolog 1A	[more]
AT4G17530.1	1.7e-81	79.08	RAB GTPase homolog 1C	[more]
AT3G11730.1	9.1e-67	66.67	Ras-related small GTP-binding family protein	[more]
AT2G44200.1	6.7e-54	69.05	CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor	[more]

BLAST of Carg08041 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P28188\|RAD2A_ARATH	2.1e-81	79.70	Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3	[more]
sp\|Q9FPJ4\|RAD2B_ARATH	8.1e-81	79.59	Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=2 SV=1	[more]
sp\|Q05737\|YPTM2_MAIZE	1.4e-80	81.22	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
sp\|Q9SEH3\|RAD2C_ARATH	3.1e-80	79.08	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
sp\|P40392\|RIC1_ORYSJ	1.3e-78	77.66	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]

BLAST of Carg08041 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU62\|A0A0A0KU62_CUCSA	4.6e-97	73.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025080 PE=4 SV=1	[more]
tr\|A0A1S3BWQ8\|A0A1S3BWQ8_CUCME	1.4e-90	89.74	ras-related protein RABD2a-like OS=Cucumis melo OX=3656 GN=LOC103494456 PE=4 SV=...	[more]
tr\|A0A0A0KUE5\|A0A0A0KUE5_CUCSA	1.4e-90	89.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025060 PE=4 SV=1	[more]
tr\|A0A251QMC8\|A0A251QMC8_PRUPE	8.7e-88	92.22	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G271800 PE=4 SV=1	[more]
tr\|W9RPK9\|W9RPK9_9ROSA	6.9e-85	84.69	Ras-related protein RABD2c OS=Morus notabilis OX=981085 GN=L484_024030 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR022209	CWC25
IPR019339	CIR_N_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08041-RA	Carg08041-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 432..452
None	No IPR available	COILS	Coil	Coil	coord: 22..49
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 549..570 score: 56.84 coord: 636..649 score: 55.32 coord: 670..692 score: 43.85
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 554..722 e-value: 4.2E-4 score: 9.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 546..695 e-value: 1.7E-26 score: 104.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 549..695 e-value: 1.8E-89 score: 313.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 551..694 e-value: 1.1E-12 score: 42.7
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 541..716 e-value: 5.2E-60 score: 204.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 699..724
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 701..724
None	No IPR available	PANTHER	PTHR16196	CELL CYCLE CONTROL PROTEIN CWF25	coord: 236..504 coord: 1..290
None	No IPR available	PROSITE	PS51419	RAB	coord: 544..724 score: 30.862
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 547..695 e-value: 1.39059E-102 score: 313.111
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	SMART	SM01083	Cir_N_3	coord: 10..46 e-value: 9.9E-13 score: 58.3
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	PFAM	PF10197	Cir_N	coord: 11..46 e-value: 8.8E-15 score: 54.5
IPR022209	Pre-mRNA splicing factor	PFAM	PF12542	CWC25	coord: 64..155 e-value: 5.5E-12 score: 46.2
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 550..693 e-value: 1.2E-49 score: 167.9
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 547..687 e-value: 5.3E-22 score: 76.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 545..701

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08041	Cla010701	Watermelon (97103) v1	carwmB0369
Carg08041	Csa4G025060	Cucumber (Chinese Long) v2	carcuB0403
Carg08041	MELO3C017635	Melon (DHL92) v3.5.1	carmeB0384
Carg08041	ClCG07G017070	Watermelon (Charleston Gray)	carwcgB0373
Carg08041	CSPI04G04200	Wild cucumber (PI 183967)	carcpiB0408
Carg08041	Cucsa.094010	Cucumber (Gy14) v1	carcgyB0431
Carg08041	CmaCh04G003680	Cucurbita maxima (Rimu)	carcmaB0529
Carg08041	CmaCh16G002260	Cucurbita maxima (Rimu)	carcmaB0526
Carg08041	CmoCh04G003860	Cucurbita moschata (Rifu)	carcmoB0514
Carg08041	CmoCh16G002450	Cucurbita moschata (Rifu)	carcmoB0509
Carg08041	Lsi07G001260	Bottle gourd (USVL1VR-Ls)	carlsiB347
Carg08041	Cp4.1LG14g05340	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08041	Cp4.1LG01g03440	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08041	CsGy4G004130	Cucumber (Gy14) v2	carcgybB0382
Carg08041	MELO3C017635.2	Melon (DHL92) v3.6.1	carmedB0388
Carg08041	CsaV3_4G004290	Cucumber (Chinese Long) v3	carcucB0405
Carg08041	Cla97C07G144110	Watermelon (97103) v2	carwmbB0400
Carg08041	Bhi01G001996	Wax gourd	carwgoB0460

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08041	Carg16767	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08041	Bottle gourd (USVL1VR-Ls)	carlsiB339
Carg08041	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08041	Watermelon (Charleston Gray)	carwcgB0367
Carg08041	Watermelon (97103) v1	carwmB0374
Carg08041	Wax gourd	carwgoB0456