Lsi07G001260 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G001260
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRAN GTPase 3
Locationchr07 : 1410758 .. 1413829 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAACTTCTCTCGTTCTTCAGTTCTCTTTATTTCATCTTTCTTCTGCGTGCATTCGACTTCTTTACTCTCTTCCTCCTTCGTCTCTCTCGTCTCTCCCCTGTGGATCGCAGGCCGGTCTGAATTATCTGGACCGGTTCAACTCCGGTTGAGCTTTTTCCCCATTCTAGATCAGCATTCCGCCAGCAATCATGAGTCCTGAGTAGTAAGTCGCTTTATTGATCGAATCGTTTTCAAGCAATTTCCGTTCTTGACAACTTTTTTTTTTTTTGTCGGTTTCAGTTTTTCTTTTTCCTTTGTTTGATTGATGTTTGTTCGTTATTATTATGATGAACTATTACCCAATTTAAGGATTGTTTGGATCTGTGATTGTCACACACACACACATATATATTTGAATTGTTGTCGAGGTCGACGAATCCGATTGTTTTTGGATTGATAGGCACGTCTGATTCAAAGCCCTCGTTCAGTTTAAGTTTCAACAGATTTCGAGAAAATTTTGAAGCGAATTGTACTTATATTCATGGAGAAGGAAGAAGGGGCAATTTTGCGTCCCGTTTAGTTTCTCTTAAATTACTTAACATTTCATTGTTATTCAACCAGTTTGTCTCCCTGATTTTTTTTTTGTATAGAATTGAGATGATTAAAATTTCCCCCCTACATGGATTGGACATTTTCCCCCTTTGTTTTTTCTATTTGATATGGATTTTTGTTCTCTCGGATGCGATGGCATTGGGCATTATATTTTTAAATAATAGAAGAATTTTAAAAAAGTTACAAATATTGTTATCCCTACTGGTTTCCCAATGATATGATTAACTTTGTCAGACGCAGACCTATTGCTTTTTGCAACTGAGTGCCTTCTCAGAATTTTAATTATGAATGCTGTTCGTCGAGTTTGGACCACTGCTTGCTTTGATATTTAGTTCTTCAAGTTGATGGTTTATAAAATTACGGTAGTACAACGTTTTGTTTAAATAATCACCTGACAATTCTGTGCCTGTGTGTGTATATTAATCACTTTAATTTAATCGGCCGGCTAAGAATGTGCAAAATAGATACCCATAAATTTTATTTGCAGTCTAGATGACAATGGGTATTTTTTTACTGGCGTTGTCGAATTAACATCCCTTTGTGTTAAGTAATTGACTTCTTAGGCCCGGTTTCATAATCATTTGGTTTTTGGTTTTGGTTTTTGAAAATTAGACATTTTTTAAACAATTTGTTCGTGGTGGTTTTATTTTTTCCTAATACGTAGTCAAATTCCATAAACAAAAATAAGTTTTTAAAAACTACCATATTTAGTTTTCAAAACTTGGCTTGGATTTTGAAAACGTTTATAAAAGATAATGACAAAACAAAGAAACTAATAAACTAATAAGTGGAAGTAGTATTTATAAGATAATTTTTAAACCAAAAACCAAACAGTTAGCAAATGGGGCTTTAACCTTCAGGTTTTTTTCCCCCTGTCTTTAATAATCTTTCACTCTGGTTTTCTCTGATAGTGACTATTTGTTCAAGCTCTTGCTTATTGGAGATTCTGGCGTTGGGAAATCATGTCTTCTGTTGAGATTTGCTGTAAGTTTCAGAACTGTACCACTCTCTGTTCTACATTTACTACTCTTAGGTTATATGCTTTCTTTCACTTTCCTTGATCTCAAGGGTGATTGATAAAGTTGTCTTTGTGCAACTAACCTTCATTGTTTTCTTTTTCTAAACTTGATGGAGTTGACAACGTGAAGCAGAAAATGTTTCAATTTGTTTTACCACTTTTGTCATTCCTTATAAGGCACTTCATCTCCTTTAAAATCTACTTTCCACTACCCTAGATTCCTATATTGTGGATTATCGAATGTAGACACGTATTGCTTGGCTTGTTATCTATGAATTCGAACCTTGTAGCTTTAAAGAAATCCAAAGCAAATGAAATGTATGTTTGAATAGGAAAGTTTCAAAAGTTATTTTCAAACAGAGCGTGGAGAGTTAAGAATCACTGTTGACAATTTGAAACATTTGTTGTATCAGCGGCATGGCATGTGATCCATATTTTTTTAATATCTAATATTTATTTCTCACTTGCTCTCGTGATACTGAAGAAACTGCTGTCTTATTCTTCCATTTTGGCAGTTGTTAAATTGCCTACGTGCCAATATCTTTTATTGTTCAGAAAGTTGCTTTTTCTTGAAGTTTCATCAGTAATAAACTGAACTAATTAGTTTCTTTTGTAACTTATATACAGGATGACTCATACCTGGATAGTTATATTAGCACCATTGGAGTTGATTTTGTAAGCTTTTCAATGATGCTAGAACTTCAACCTGGTTCTATTTTTATTTATGTACATGTGCACTGATCACTTAAAGGTTTTGATGTTCTAGAAAATACGCACTGTGGAACAGGATGGAAAGACCATTAAACTTCAAATTGTGAGACTCTCTTTCTCTACACATATGCTTTCTTATTAATAAAAATAACGAATCTGTAAGTTCTCTTCTCTGATTATTGGAGTATTCAGTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGTGGGGCACATGGCATAATAGTAAGTTTTATGTACTGTAACTTCCAGTATAGCAAATTTTATCTAGTCACAATGCTCTGAGTTTGTTTCTCTTGTTGGTTCAAGATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTCAAGCAATGGTTAAACGAAATTGACCGTTACGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTGTGACCTCCCTAATAGAGTAGTGTCCTACGAATCAGCTAAGGTAAAATTGATATATTCTGTCATTGTTCATTTGTTGACTGAATTTGCTGCTGAAAGCCTCGGAGGTATGAGAAGCTGAGTGAAAATTCTTTTAACGTGTTTTCGTAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGCGCAAAAGATTCCACCAATGTAGAGCAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGTACATCTCCCTTCTCATCCGTGTGCTAATGTGCTAA

mRNA sequence

TATAAACTTCTCTCGTTCTTCAGTTCTCTTTATTTCATCTTTCTTCTGCGTGCATTCGACTTCTTTACTCTCTTCCTCCTTCGTCTCTCTCGTCTCTCCCCTGTGGATCGCAGGCCGGTCTGAATTATCTGGACCGGTTCAACTCCGGTTGAGCTTTTTCCCCATTCTAGATCAGCATTCCGCCAGCAATCATGAGTCCTGAGTATGACTATTTGTTCAAGCTCTTGCTTATTGGAGATTCTGGCGTTGGGAAATCATGTCTTCTGTTGAGATTTGCTGATGACTCATACCTGGATAGTTATATTAGCACCATTGGAGTTGATTTTAAAATACGCACTGTGGAACAGGATGGAAAGACCATTAAACTTCAAATTTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGTGGGGCACATGGCATAATAGTAAGTTTTATGTACTACCAGGAGAGTTTTGAAAATGTCAAGCAATGGTTAAACGAAATTGACCGTTACGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTGTGACCTCCCTAATAGAGTAGTGTCCTACGAATCAGCTAAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGCGCAAAAGATTCCACCAATGTAGAGCAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGTACATCTCCCTTCTCATCCGTGTGCTAATGTGCTAA

Coding sequence (CDS)

ATGAGTCCTGAGTATGACTATTTGTTCAAGCTCTTGCTTATTGGAGATTCTGGCGTTGGGAAATCATGTCTTCTGTTGAGATTTGCTGATGACTCATACCTGGATAGTTATATTAGCACCATTGGAGTTGATTTTAAAATACGCACTGTGGAACAGGATGGAAAGACCATTAAACTTCAAATTTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGTGGGGCACATGGCATAATAGTAAGTTTTATGTACTACCAGGAGAGTTTTGAAAATGTCAAGCAATGGTTAAACGAAATTGACCGTTACGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTGTGACCTCCCTAATAGAGTAGTGTCCTACGAATCAGCTAAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGCGCAAAAGATTCCACCAATGTAGAGCAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGTACATCTCCCTTCTCATCCGTGTGCTAATGTGCTAA

Protein sequence

MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVSFMYYQESFENVKQWLNEIDRYASENVNKLLVGNKCDLPNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYISLLIRVLMC
Homology
[Close]
BLAST of Lsi07G001260 vs. Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 3.8e-80
Identity = 151/175 (86.29%), Postives = 161/175 (92.00%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  NRVVSYE+ KA ADE+GIPF+ETSAKD+TNVE+AFM M  +IKNR  S
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. Swiss-Prot
Match: RAD2C_ARATH (Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.4e-79
Identity = 151/175 (86.29%), Postives = 163/175 (93.14%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV++ +   ESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPN-RVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL + +VVS E+AKAFADE+GIPF+ETSAK++TNVE+AFMAMTA IK R  S
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175

[Close]
BLAST of Lsi07G001260 vs. Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.5e-78
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  QESF NVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NK DL  N+VV+ E+AKAFADE+GIPFMETSAK++TNV+QAFMAM A IK+R  S
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMAS 175

[Close]
BLAST of Lsi07G001260 vs. Swiss-Prot
Match: RAD2A_ARATH (Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3)

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-78
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  +ESF NVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NK DL  NR + YE+AKAFADE+GIPFMETSAKD+TNVEQAFMAM+A IK R  S
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 175

[Close]
BLAST of Lsi07G001260 vs. Swiss-Prot
Match: RAD2B_ARATH (Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-77
Identity = 150/175 (85.71%), Postives = 162/175 (92.57%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV++ +   ESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPN-RVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NK DL + +VVS E+AKAFADE+GIPF+ETSAK++TNVE+AFMAMTA IK R  S
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TrEMBL
Match: A0A0A0KUE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025060 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-85
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  QESFENVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDLPNR VSYESAKAFADEVGIPFMETSAKD+TNVEQAFMAMTADIKNR  S
Sbjct: 121 NKCDLPNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMAS 174

[Close]
BLAST of Lsi07G001260 vs. TrEMBL
Match: W9RPK9_9ROSA (Ras-related protein RABD2c OS=Morus notabilis GN=L484_024030 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-81
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAKD+TNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TrEMBL
Match: M5WBY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011633mg PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.9e-81
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAK+STNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TrEMBL
Match: I6QL77_HEVBR (Small GTPase OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.5e-80
Identity = 155/175 (88.57%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAK++TNVE+AFMAM ADIKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TrEMBL
Match: Q40203_LOTJA (RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.5e-80
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAK++TNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TAIR10
Match: AT4G17530.1 (AT4G17530.1 RAB GTPase homolog 1C)

HSP 1 Score: 295.0 bits (754), Expect = 3.1e-80
Identity = 151/175 (86.29%), Postives = 163/175 (93.14%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV++ +   ESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPN-RVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL + +VVS E+AKAFADE+GIPF+ETSAK++TNVE+AFMAMTA IK R  S
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TAIR10
Match: AT1G02130.1 (AT1G02130.1 RAS 5)

HSP 1 Score: 291.2 bits (744), Expect = 4.4e-79
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  +ESF NVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NK DL  NR + YE+AKAFADE+GIPFMETSAKD+TNVEQAFMAM+A IK R  S
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 175

[Close]
BLAST of Lsi07G001260 vs. TAIR10
Match: AT5G47200.1 (AT5G47200.1 RAB GTPase homolog 1A)

HSP 1 Score: 290.4 bits (742), Expect = 7.5e-79
Identity = 150/175 (85.71%), Postives = 162/175 (92.57%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV++ +   ESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPN-RVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NK DL + +VVS E+AKAFADE+GIPF+ETSAK++TNVE+AFMAMTA IK R  S
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS 175

[Close]
BLAST of Lsi07G001260 vs. TAIR10
Match: AT3G11730.1 (AT3G11730.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 261.5 bits (667), Expect = 3.7e-70
Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MS EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ +     ESF NVKQWL+EIDRYA+E+V KLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNR 171
           NK D+  ++VVS E+ +A ADE+GIPF+ETSAKDS NVEQAF+ +  +IK +
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKK 172

[Close]
BLAST of Lsi07G001260 vs. TAIR10
Match: AT5G03520.1 (AT5G03520.1 RAB GTPase homolog 8C)

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-56
Identity = 107/170 (62.94%), Postives = 132/170 (77.65%), Query Frame = 1 

Query: 4   EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
           +YDYL KLLLIGDSGVGKSCLLLRF+DD++  S+I+TIG+DFKIRTVE DGK IKLQIWD
Sbjct: 11  DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70

Query: 64  TAGQERFRTITSSYYRGAHGIIVSFMYYQE-SFENVKQWLNEIDRYASENVNKLLVGNKC 123
           TAGQERFRTIT++YYRGA GI++ +    E SF N++ W+  I+++AS+NVNK+LVGNK 
Sbjct: 71  TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKA 130

Query: 124 DL--PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNR 171
           D+    R V     +A ADE GI F ETSAK + NVE  FM++  DIK R
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180

[Close]
BLAST of Lsi07G001260 vs. NCBI nr
Match: gi|449458327|ref|XP_004146899.1| (PREDICTED: ras-related protein RABD2a [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 3.9e-85
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  QESFENVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDLPNR VSYESAKAFADEVGIPFMETSAKD+TNVEQAFMAMTADIKNR  S
Sbjct: 121 NKCDLPNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMAS 174

[Close]
BLAST of Lsi07G001260 vs. NCBI nr
Match: gi|703131224|ref|XP_010104830.1| (Ras-related protein RABD2c [Morus notabilis])

HSP 1 Score: 308.9 bits (790), Expect = 5.8e-81
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAKD+TNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. NCBI nr
Match: gi|568873817|ref|XP_006490023.1| (PREDICTED: GTP-binding protein YPTM2-like [Citrus sinensis])

HSP 1 Score: 308.5 bits (789), Expect = 7.6e-81
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT+KLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLPN-RVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL + +VVSYE+AKAFADE+GIPFMETSAKDS NVEQAFMAMTADIKNR  S
Sbjct: 121 NKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. NCBI nr
Match: gi|657955483|ref|XP_008369210.1| (PREDICTED: ras-related protein RABD2c [Malus domestica])

HSP 1 Score: 308.1 bits (788), Expect = 9.9e-81
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAK+STNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMAS 175

[Close]
BLAST of Lsi07G001260 vs. NCBI nr
Match: gi|595848879|ref|XP_007209617.1| (hypothetical protein PRUPE_ppa011633mg [Prunus persica])

HSP 1 Score: 308.1 bits (788), Expect = 9.9e-81
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 1 

Query: 1   MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVSF-MYYQESFENVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV + +  QESF NVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDL-PNRVVSYESAKAFADEVGIPFMETSAKDSTNVEQAFMAMTADIKNRYIS 174
           NKCDL  N+VVSYE+AKAFADE+GIPFMETSAK+STNVEQAFMAM A+IKNR  S
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMAS 175

The following BLAST results are available for this feature:
BLAST of Lsi07G001260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIC1_ORYSJ3.8e-8086.29Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2[more]
RAD2C_ARATH5.4e-7986.29Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=2 SV=1[more]
YPTM2_MAIZE3.5e-7885.14GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1[more]
RAD2A_ARATH7.8e-7883.43Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3[more]
RAD2B_ARATH1.3e-7785.71Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2 SV=1[more]
BLAST of Lsi07G001260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUE5_CUCSA2.7e-8593.10Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025060 PE=4 SV=1[more]
W9RPK9_9ROSA4.0e-8189.71Ras-related protein RABD2c OS=Morus notabilis GN=L484_024030 PE=4 SV=1[more]
M5WBY4_PRUPE6.9e-8189.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011633mg PE=4 SV=1[more]
I6QL77_HEVBR1.5e-8088.57Small GTPase OS=Hevea brasiliensis PE=2 SV=1[more]
Q40203_LOTJA1.5e-8089.14RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1[more]
BLAST of Lsi07G001260 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17530.13.1e-8086.29 RAB GTPase homolog 1C[more]
AT1G02130.14.4e-7983.43 RAS 5[more]
AT5G47200.17.5e-7985.71 RAB GTPase homolog 1A[more]
AT3G11730.13.7e-7076.16 Ras-related small GTP-binding family protein[more]
AT5G03520.13.1e-5662.94 RAB GTPase homolog 8C[more]
BLAST of Lsi07G001260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458327|ref|XP_004146899.1|3.9e-8593.10PREDICTED: ras-related protein RABD2a [Cucumis sativus][more]
gi|703131224|ref|XP_010104830.1|5.8e-8189.71Ras-related protein RABD2c [Morus notabilis][more]
gi|568873817|ref|XP_006490023.1|7.6e-8189.14PREDICTED: GTP-binding protein YPTM2-like [Citrus sinensis][more]
gi|657955483|ref|XP_008369210.1|9.9e-8189.71PREDICTED: ras-related protein RABD2c [Malus domestica][more]
gi|595848879|ref|XP_007209617.1|9.9e-8189.71hypothetical protein PRUPE_ppa011633mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G001260.1Lsi07G001260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 10..168
score: 1.4
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 7..162
score: 9.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..170
score: 3.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..174
score: 9.42
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 111..124
score: 8.7E-47coord: 50..72
score: 8.7E-47coord: 9..30
score: 8.7E-47coord: 32..48
score: 8.7E-47coord: 145..167
score: 8.7
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..173
score: 6.8E
NoneNo IPR availablePANTHERPTHR24073:SF520RAS-RELATED PROTEIN RABD2B-RELATEDcoord: 1..173
score: 6.8E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..170
score: 1.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..169
score: 6.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..170
score: 3.0
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 14..179
score: 0.
NoneNo IPR availablePROFILEPS51419RABcoord: 4..181
score: 33

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G001260Csa4G025060Cucumber (Chinese Long) v2culsiB303
Lsi07G001260CSPI04G04200Wild cucumber (PI 183967)cpilsiB303
Lsi07G001260Cucsa.094030Cucumber (Gy14) v1cgylsiB115
Lsi07G001260CmoCh04G003860Cucurbita moschata (Rifu)cmolsiB690
Lsi07G001260Cla010704Watermelon (97103) v1lsiwmB441
Lsi07G001260MELO3C017637Melon (DHL92) v3.5.1lsimeB454
Lsi07G001260ClCG07G017070Watermelon (Charleston Gray)lsiwcgB407
Lsi07G001260MELO3C017637.2Melon (DHL92) v3.6.1lsimedB471
Lsi07G001260Cla97C07G144110Watermelon (97103) v2lsiwmbB406
Lsi07G001260Bhi01G001998Wax gourdlsiwgoB555
Lsi07G001260CsGy4G004130Cucumber (Gy14) v2cgyblsiB277
Lsi07G001260Carg08041Silver-seed gourdcarlsiB347
Lsi07G001260CsaV3_4G004290Cucumber (Chinese Long) v3cuclsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G001260Bottle gourd (USVL1VR-Ls)lsilsiB018
Lsi07G001260Cucurbita maxima (Rimu)cmalsiB323
Lsi07G001260Cucurbita maxima (Rimu)cmalsiB590
Lsi07G001260Cucurbita maxima (Rimu)cmalsiB696
Lsi07G001260Cucurbita moschata (Rifu)cmolsiB312
Lsi07G001260Cucurbita moschata (Rifu)cmolsiB573
Lsi07G001260Cucurbita pepo (Zucchini)cpelsiB182
Lsi07G001260Cucurbita pepo (Zucchini)cpelsiB374
Lsi07G001260Wild cucumber (PI 183967)cpilsiB389
Lsi07G001260Cucumber (Chinese Long) v2culsiB385
Lsi07G001260Melon (DHL92) v3.5.1lsimeB428
Lsi07G001260Watermelon (Charleston Gray)lsiwcgB393
Lsi07G001260Silver-seed gourdcarlsiB653
Lsi07G001260Silver-seed gourdcarlsiB792
Lsi07G001260Cucumber (Chinese Long) v3cuclsiB408
Lsi07G001260Watermelon (97103) v2lsiwmbB390