CmaCh04G003680 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G003680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pre-mRNA splicing factor
Location	Cma_Chr04 : 1833087 .. 1840107 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCAGATTACTAGTGGGTGAAAAATTCGCGGGCTAGGAGAGGCGGCGGCAGCGACGGGGACGATCTGATTCCCCTATCTGAATCTCGAACTTCTTCCTCACAAAACCACAGCGCTTGTGGCTAGTAATCCGATTCCCACGTGAAACTCGGTTAGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAGCAGATCCATGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGTATGTTTTTCCTTTTGTCTTTCTTCTATCGTGTTGTTTACAGATCGAATTGTATATTTTATAGGTAGTCTGTGAGTTTCAAATTCAATTGGATCTCTGAGTAGATAAGGATTGAAAATGTGTCCTCGGTTAGGATTAGGGTTAGGGTCTAATTTGTTCGATCGATTTGGCTAATATTCGGATTTTGGTCAATATGGCGTTTCAGGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCGAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGTACTGTTACTCGTTGTCTCTGTTCTGTTAATTTGTGTACTTTGGCTATGTCTTCGGTGCTCAATCATGATTTTGTTGCATTTTTGTGTTGTTTTTACAGGAAGCCGCTGTCCCAGGAGCTCTTTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAGAAACAATCCTATTCAGATGGCTATGATTCGCAAGACTGTAAGTTCCCATTTTTCTTTCTTCCCTGATGTTTTATTTTCTCATTTATCGCAAAACAATCCTACAATCCTACAATCCTATTAAGCATTGGCTGTGGAAATTATATGGAAATATTCTTCTTCCATTCATTCTTGTCCAGTGAAACTCTCTAAACTTATATGTTAGCTTGTATATAGACACTTGTTGGTAGTGTAATGTAACAGATCAGCTCACCACTCATAGATATTGTTTGCTTTTGTCCATTACATATTGCGGTCAGCCTCAAAGTTTTAAAATGCGTATGCTAGGGAGAGGTTTCCACATCCTTATAAAAAAAAATTTATTCCCCTCTCCAACCGATGTGAGATCTCACAACCAACTTCCTTTCGAGGCCAGCGTCCTCGCTGGCATTCGTTCCCCTAGCAGACGCGTTTTAAAACTGTGAGGCTGACGGCGATACATAACAGGCTAAAACGGACAATATCGGCTAATGGTGGGCTTGAGCGATTACATGCAAGCTCTTTTCCTTCCTTGTTTGATTTGAAGAATTGATTTGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCCATACATATTTATAGGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACGTAGTAAATTTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGGTCATGACAAGAGTTCAAAACATGATGATAATTCTTATTCCGAAGATAGGAGGATAACTGATTATAAGAATGAGAGAGATGATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCTGAAGATAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGACGATCGTGACAAGAGTTCAAGACATGATGATCATTTTTATTCCAAAGATAGGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATTCAGAAGATAGAAGGAGAAGAGATGATTATAAGAATGAGAGGAACTATGACAGAGGCTCGAAATATGCAGCACAAACGACGTACGATCAGTCAGATCTAAAGTCATCCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGTTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCCGAGAAGGGAGGAAGCTCAACAATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCATTTCGACGGTAATGCACATCACTTATACACTTTGCTTATGGTTATGGTTATTGTATAACATCCTTTTTTAGTGGTACTGCTGCTGTTGACTCGATGAAGAATTGCTTCTTAAAAACATTTGGAGTTCATGTATTTGTATTATCTTTTCAATCCATTAGTATTATACTTATCTATAGTGAAATTTGTACTAAATTAATAGCAAAATTGTGATCATTATGAAACAAGTCATTTCATATTACTTTTTGATCTAGTTTACATAATTCTTGATGATTTTTTGTCCTATGTCTTTCAGCACCATTCCTCAAGGCTAAATGTTCATGTTTTTTTTTTCAAATATCAGAAGGATGGAATGATAGTGTAGTCCACAGTCAATGAAGCCGAAGGAGCTGGAGGCTTTCGATGCATCGGTCGAAAGATCGAGCTGGAGTAATAATATTGCTTTGGTCACTTGAAGGATTAAGACGTGTGGAAATACTCAAGGAAAGCAAGAGTGAATGTAATTTAACAAGACCAAGACGTAAAAGTATAGCTAATCTTGTGTGTGGGGCACTAGCATTAGAAGAACAATGCATGTCCGTCTCCCAACTTCGTTAGAATGCATTGTTTGTGTGTTTGTTTAGCGCATGAAAATTAAGGTGCAATAAGTTGTCCAAAGTCTAGCCTTTACCTTTTTAATTATTGAAACTTCGTTTCAAAAACAATCACTTCCTTAATTTATCTTTATTGCAACATATCCAAACTATATTTTTATCTATACTAACTCTAGATCACACGATCAAATGTGGGTAAATCTTGGAACTTTTCAGGTAGTACTTACTAGCGTGTTGATTTATATCTGAGTCGGCTTTTGTATGATGCTATCATTTCATCGCATCATTTTCTTACCAATTTACCCATCTCATCACTACTTTACCACTGCGTACACCGTGTTCACAACGACGAGTTTGTCCATATCACTTCTTTAAAATCGTTAGATTTAGATCTTAATATTTAGAATTTCTCTTATATATATTTATTAATATTGTTGGAAGCACTTATTTCCTTCGGCCACCTTTTAAGATGAGCAATGCACTGACTAAATGAAGTGTTAACATCGCAGTTGATTGGGCCAGGGTCCACTAGGCCCAGAATGACAGGTCCACATAAAAAGTAAAATATTTGTATTTTCAAATCCCATCCGTGAAGGGGTTGAAATGCGAATATTTAGAAATTAAGGGAAAATAAGAAATTTCAGAAAATTCTGTGGTGAAAAACGCGAATTTCAAACATTTTTCTCGTTCTTCAGTTCTACAAATCTTTATTTCATCTTCTGCCTTTTGTCGTCGACTTCATCACTCTCTTCCTTTTCGTCTCTCTCGTTTCTGCCCTTTGGATCGCCCACCGGTCTGAATTACCTTGACCGGTTCTAATCCGGTTGCGCTTTTCCCCTTTCTAGATCAGCATTCCACCAACAATCATGAATCCTGAGTAGTAAGTCGCGTTATTGATCGAATCTTTTTCAAGCGATTCCCGTATGTGAATAACTTTTGATTTTGTTTTGTTTTGTTTCGTTTGGCGACAATGATCCATTAGGATAGTTTCAATAACTAGGTTTCAGTTTTTCTTTCTCCTATGTTTGATGCTTGTTTTTTTATATACATATTCTGTCCATTTAAGGATTAGATCTGTGATTCTCATTTTTCTTTGTAATCAACGATTTTCTCTTGAGGTGGATGAATTCGATTGTTTTTGGATTGATCGAATCTTCTAATTCAAAGCTCTTGTTCGGTTAAGTAAAACGGAATTCAGAGCGTTCTTATTTTTGATTGGTCGACAAACCATTGAATTGAATTGAATTTTATGTAGATAGGAGGGGGCCAATTACCTTTTAGTTTCTTTTAAATTCAAAACGTATATATAATACCCTTGAAATTCTATTGTTTTTCCACCAATTGGTCTCCCCAAAATTTTTAGAGTTGAGATTATCTATGAAAATTTTGCCTTTTCTGAAAATTTCCAACTTGACCTCTTCATGGATGACATTTTTTTTTCTTTGTTCTGTGTATGGATATGAACTTTGGTTCTCTTGGATGCGAAGGCATTAGGCATCATATATTTTTTTATAAATAAATGAAAATTTGATAAGTTACAATTCTCTTTGTCCCTATTGGTTTGCTTTTTACTAATTTGCCTTTTCAGTGTTTGAATTATTAACATTGTTCGTCGAACTGGACGACTGCTTGCTTTGATATTTATTTTAAGTTTATTTTATTCAAGCAAATGATTATTAATTAAATCAGTTGCTTAAGAATGTAAAACAGATACCCAGATAAATTTTCATCGTAAGCTGTGGATGTTCATGATTGTAACTTTTAAGTAATTGTGTTTGTAACATTTGAGTTTTTTTGTTTTTCTAATTTGGTTTTCGCTGATAGTGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGCTGTAAGATTCATTACTCTATCATCGTCTGTTCAACATTTGTAACTCTTAGGTTACACGCTTCATCTTCATTAAAATTGATTTTTGATTACCTCTAGATTATTATGTTATGGATTACTGAATGTTGACACATAGTGCTTGTTATATATCCATTCGAACTGCGTAGATCCGAAGCGGCAAAGCAAATGAAATGTATGTTTGAATTAGAAAGTTTCAAAAGCTTTTTCGAACAAGAGATGGAGAGTTGGGAATTATATATTGTAGTGGAAGGTTTTGGATCCGATAGCTCCTTGATCTTTTTCACTATTGTGATAATTGTGGCATGACATCTCATGATACTGAAGAAATTGCTTTCTTGTTCTTCCATTTTGACAGTTATTAAATTGCCTACTTGCCAAGGGTTTTTCTTGTTTAGATAGTTGCTTTCTTGGAGTTTCATCTACTGATTGGTTTCATTTGTATCTTATATACAGGATGACTCATATCTGGATAGTTATATTAGTACCATTGGAGTTGATTTTGTAAGCTTTTATGATCCTTGAAGTTCAAACCCGTTCTGTTTTAATTATGTATCTGGGCTCTGATCACTTAAGGATTTTGATGTTCTAGAAAATACGCACCGTGGAGCAGGATGGAAAGACAATTAAACTCCAAATTGTGAGACTTTCTCTCTACACGTGCGCACACACGTATATATATTGTGACACACACATACATACATAGGCTTTCTGCAAGTCCTCTTTTCTGACTTCTGGAGTATTCAGTGGGATACTGCAGGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGCGGGGCACATGGCATAATAGTAAGTTTTATGCATTATAGCTCCGGTATAGCAACTTTTCTCTAATCACAGAACTCTGAGTTTGTTTCCCTCGTTGGTTCAGATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTTAAGCAATGGTTAAACGAAATTGACCGTTATGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTGTGATCTTCCTAATAAAGTAGTGTCCTATGAATCAGCAAAGGTAAAAGCGATTTGTTGACTTAAATTTTACTGCAAGCCTCGGAGGCATGAGAAACCGAGTAAAATTCTTTTGACGATCTCACATTTTTGTAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGTGCAAAAGATGCTACCAATGTAGAGCAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGTATATCTCCCTCTCTTGTGGGCAGAATTTCAATCGAATGTGTAACGAATCTAGATTTCTACTTAACCTAAATCTAGATTTCTACTTAACCTAAAGTATGTATGGTATACATATCAATATCATTTTATACGAAAATAATAATTTAAAACTATATACAGTAGCGATTTTAGGTTAAGTAGCAATCTAGGGTCGTTATACAATGACACAAAAAAAAAAAACCAAATATTTCAACTTAGTTTCGTTTTGTAGACCACTTGAACAATTACTAATCTTCATGCTCTGCATCCAGGATGGCAAGTCTGCCTGCGAACAATGCGAGGCCACCAACGGTGCAGCTACAGGGGCAACCCGTCAACCAGAAGGGTGGATGTTGTTCTTAGTTGGTTGTTTCTGCCATTGCAAGTGTGCATTGTGCACGTAATATCAAATCTCTCTCTATAAAGTATCTGAAATCCCATTCATTTCAAATAGACCTTGAATTGTCACTCTATACCTTTCTGTATTATCAAAGCAGTAGTATTTCCTTTTTCTTCTTTCCAATACCTGTTTTAAGCTGCCGTGTAGGGAACTTTTAGAGGTATAGTTCAAGCCATCTCTCAGTTTATTTGCCTCATTATATTTGTTTGGAGAATGCTTGGATGCTTTATGTTTCTGACTTTAGATAGCAAATGGTAGAGCTTAAGAATGCTCAAATTTGTCTTCTTTTTTGTGTTGAT

mRNA sequence

TCTTTCAGATTACTAGTGGGTGAAAAATTCGCGGGCTAGGAGAGGCGGCGGCAGCGACGGGGACGATCTGATTCCCCTATCTGAATCTCGAACTTCTTCCTCACAAAACCACAGCGCTTGTGGCTAGTAATCCGATTCCCACGTGAAACTCGGTTAGAGACATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAGCAGATCCATGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCGAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGAAGCCGCTGTCCCAGGAGCTCTTTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAGAAACAATCCTATTCAGATGGCTATGATTCGCAAGACTGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACGTAGTAAATTTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGGTCATGACAAGAGTTCAAAACATGATGATAATTCTTATTCCGAAGATAGGAGGATAACTGATTATAAGAATGAGAGAGATGATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCTGAAGATAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGACGATCGTGACAAGAGTTCAAGACATGATGATCATTTTTATTCCAAAGATAGGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATTCAGAAGATAGAAGGAGAAGAGATGATTATAAGAATGAGAGGAACTATGACAGAGGCTCGAAATATGCAGCACAAACGACGTACGATCAGTCAGATCTAAAGTCATCCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGTTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCCGAGAAGGGAGGAAGCTCAACAATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCATTTCGACGTGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGCTGTAAGATTCATTACTCTATCATCGTCTGTTCAACATTTATCCGAAGCGGCAAAGCAAATGAAATGACAGGAGCGTTTTAGGACCATCACTAGTAGCTACTACCGCGGGGCACATGGCATAATAATTGTTTATGATGTAACAGACCAGGAGAGTTTTGAAAATGTTAAGCAATGGTTAAACGAAATTGACCGTTATGCAAGTGAAAACGTAAACAAGCTTCTAGTTGGCAATAAGTGTGATCTTCCTAATAAAGTAGTGTCCTATGAATCAGCAAAGGCTTTTGCTGATGAGGTTGGGATCCCATTTATGGAGACAAGTGCAAAAGATGCTACCAATGTAGAGCAGGCATTTATGGCCATGACTGCTGACATTAAAAATAGGATGGCAAGTCTGCCTGCGAACAATGCGAGGCCACCAACGGTGCAGCTACAGGGGCAACCCGTCAACCAGAAGGGTGGATGTTGTTCTTAGTTGGTTGTTTCTGCCATTGCAAGTGTGCATTGTGCACGTAATATCAAATCTCTCTCTATAAAGTATCTGAAATCCCATTCATTTCAAATAGACCTTGAATTGTCACTCTATACCTTTCTGTATTATCAAAGCAGTAGTATTTCCTTTTTCTTCTTTCCAATACCTGTTTTAAGCTGCCGTGTAGGGAACTTTTAGAGGTATAGTTCAAGCCATCTCTCAGTTTATTTGCCTCATTATATTTGTTTGGAGAATGCTTGGATGCTTTATGTTTCTGACTTTAGATAGCAAATGGTAGAGCTTAAGAATGCTCAAATTTGTCTTCTTTTTTGTGTTGAT

Coding sequence (CDS)

ATGGCGTTGAAGTTCTTGAACAAGAAAGGATGGCACACCGGTAGTCTCCGGAACATAGAGAACGTCTGGAAGGCGGAGCAGAAGCACGAGGCCGAGCAGAAGAAGTTGGAAGAGCTCCGTAAGCAGATCCATGAGGAGAAGGAGCGCCAAGAGTTTCGTCTTCTTCAAGAACAGGCCGGCCTCGTTCCGAAGCAGGAGAGATTGGATTTTCTTTATGAATCGGGTTTGGCAGTCGGGAAAGCCAGCGAGTCCGATGGATTTAAGAGTCTCGAAACCCTACCGAGTACATCTACTCCCGCGGCTTCCTCTGATCCATCTAGTTCCAAGGAAGCCGCTGTCCCAGGAGCTCTTTTTGTGGATAAACTTCCTTCTGCTAATGACGCATGGAGGAAGCTTCATTCTGATCCTTTGCTTATCATTCGACAACGTGAGCAACAAGCTCTTGCACGCGTAAGAAACAATCCTATTCAGATGGCTATGATTCGCAAGACTGTTGAAGGGGAAAAACACAAGGAAAAGAATCCTGATCACAAAAGAGATCGAAAGAAGCACCGACGTAGTAAATTTAAACATTTTTCTCCAGAACGAGATCATGATTCTGAAGATGCCAGCCCTGAGAGGCAGAGAAGGAAACATGGTCATGACAAGAGTTCAAAACATGATGATAATTCTTATTCCGAAGATAGGAGGATAACTGATTATAAGAATGAGAGAGATGATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCATTCTTATTCTGAAGATAGAAGAACTGATTATAAGAATGAGAGGGATCATAAAGACGATCGTGACAAGAGTTCAAGACATGATGATCATTTTTATTCCAAAGATAGGAGGAGAACTGATTATAAGAACGAGAGAGATCATAAAGATGATCGTGACAAGAGTTCAAGACATGATGATCACTCTTATTCAGAAGATAGAAGGAGAAGAGATGATTATAAGAATGAGAGGAACTATGACAGAGGCTCGAAATATGCAGCACAAACGACGTACGATCAGTCAGATCTAAAGTCATCCAAAACCAATTCTCATGATTCTGCAGAGAGACATCATGACAGATCAAAGAGAGAGAGAGATTCTTATGCTAACAACGAAAAGGTGAGCAGAAGAGTGGGGGAATCGAGATCTTATGAACCCAATGCTTCTGAAACTCCTCATGAGTCGCGCCATAAGCACCGTAGGCCTGCTACAAAGCTTTCAGAAGAAGAGCGTGCAGCTAGGTTGCGTGAGATGCAGCAGGATGCCGAGTTACATGAAGAGCAAAGATGGAGGCGTTTGAAGCAGGCAGCTGAGGATGATGCACTGGAAGCCAAACAAAATGCAGCAGTGCCCTCGAGCAAAAATTTCTTGGACGCTGCTCAGAAAAGCATGTATGGTGCCGAGAAGGGAGGAAGCTCAACAATCGAGGAGAGTATTCGTCGTAGGACGTATTATTCACAGGGTAAATCTGATATTGAAGCCAATGCATTTCGACGTGACTACTTGTTCAAGCTCTTGCTTATTGGGGACTCTGGAGTTGGCAAATCATGTCTTCTATTGAGATTTGCTGTAAGATTCATTACTCTATCATCGTCTGTTCAACATTTATCCGAAGCGGCAAAGCAAATGAAATGA

Protein sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAGLVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVDKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRDRKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKNERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGSSTIEESIRRRTYYSQGKSDIEANAFRRDYLFKLLLIGDSGVGKSCLLLRFAVRFITLSSSVQHLSEAAKQMK

Homology

[Close]

BLAST of CmaCh04G003680 vs. Swiss-Prot
Match: CWC25_HUMAN (Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.7e-12
Identity = 85/292 (29.11%), Postives = 143/292 (48.97%), Query Frame = 1


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAGLVPK-QE 67
           KK WH  +LRN+E VWKAEQKHEAE+KK+EEL++++ EE+ R+E +   E  G V K +E
Sbjct: 9   KKSWHPQTLRNVEKVWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKKKEE 68

Query: 68  RLDFLYES--GLA------VGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALF 127
           +LD++Y+   G+       +G+  +   F+ +E   +           SS+   +PG++F
Sbjct: 69  KLDWMYQGPGGMVNRDEYLLGRPIDKYVFEKMEEKEAGC---------SSETGLLPGSIF 128

Query: 128 VDK-LPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDH 187
                 S  D   K+  DPL IIR++E++    V NNP++M  I++ ++    K++    
Sbjct: 129 APSGANSLLDMASKIREDPLFIIRKKEEEKKREVLNNPVKMKKIKELLQMSLEKKEKKKK 188

Query: 188 KRDRKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKNE 247
           K  +KKH++ K +  S +R    ++ S  R ++K  +          Y    R +D    
Sbjct: 189 KEKKKKHKKHKHRSSSSDRSSSEDEHSAGRSQKKMANSSPVLSKVPGYGLQVRNSDRNQG 248

Query: 248 RDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRR 290
                  ++   H   ++S  R +       H   R  S +      S+DRR
Sbjct: 249 LQGPLTAEQKRGHGMKNHSRSRSS------SHSPPRHASKKSTREAGSRDRR 285

[Close]

BLAST of CmaCh04G003680 vs. Swiss-Prot
Match: CWC25_ASPFU (Pre-mRNA-splicing factor cwc25 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc25 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.3e-10
Identity = 135/459 (29.41%), Postives = 206/459 (44.88%), Query Frame = 1


Query: 8   KKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAGLVPKQER 67
           KK WH   LRN E VW  E++   E+K++E+LR++  EE++ QE + LQE +G   +  R
Sbjct: 8   KKSWHPSLLRNQERVWAEEKRALEERKRIEQLRREREEERQIQELQRLQEASGKGRQLNR 67

Query: 68  LDFLYES-GLAVGK-ASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGA-LFVDKLPS 127
           +D++Y++   A G  A E +G+   +                 K   V GA      + +
Sbjct: 68  VDWMYQAPSSATGHYAEEMEGYLLGKRRIDGILLKNDESKKLEKGTDVVGANAAPPPVNN 127

Query: 128 ANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRDRKKH 187
             D   K+ +DPLL I++REQ A      N ++ ++ R     +K ++++ + +RDR   
Sbjct: 128 PRDTMAKVMADPLLEIKKREQAAY----ENMVKESVRRSQHIRDKDRDRDRERRRDRGDR 187

Query: 188 RRSKFKHFSPERD-HDSEDASPERQRRKHGHDK----SSKHDDNSYSEDRRITDYKNERD 247
            RS+ +  S  R  H+ EDA    + R H H      S    D    +DR   DY++ERD
Sbjct: 188 DRSRDRDRSHRRSRHEDEDAHRSHRHRSHRHRSRSPLSPDRSDRKRGDDR---DYRDERD 247

Query: 248 DKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNERDH 307
            +DD     R D+H    DRR D ++ERD + DR    RH   +  +D  R D+   R  
Sbjct: 248 RRDD-----RRDEHR-GHDRRDDRRSERDRRADRGDEDRHSSRYKDRD-DRYDHSTRRRS 307

Query: 308 KDDRDKSSRHDDHSYSEDRRRRDD-----YKNERNYDRGSKYAAQTTYDQSDLKSSKTNS 367
             DR  S R  +H Y  DRRR +D     +++ RN+DR   Y              K N 
Sbjct: 308 YADRSPSPRRGNHYY--DRRRTEDRSDGYHRDSRNHDRPEFYRG---------NDRKVNK 367

Query: 368 HDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEE 427
                   +RS   RD  A N++                               K+ EEE
Sbjct: 368 EPRDSNLRERSSNTRDEVAGNKE-------------------------------KVLEEE 407

Query: 428 RAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAA 454
           R  +L EM  +A   +E   +RL++ AE  A+E K+  A
Sbjct: 428 RKKKLAEMMSNA---DELEQKRLQRIAEVTAMEEKEREA 407

[Close]

BLAST of CmaCh04G003680 vs. TrEMBL
Match: A0A0A0KU62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025080 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 2.5e-150
Identity = 340/504 (67.46%), Postives = 371/504 (73.61%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKAS SDGFKSLETLPS+ST AA+++PSSSKEAAVPGALF D
Sbjct: 61  LVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAATEPSSSKEAAVPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SAND WRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVE EKHK+KNPD KR 
Sbjct: 121 KPHSANDTWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR- 180

Query: 181 RKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKNERDD 240
                                      +R+KH H KS +H D+S   D    D   E   
Sbjct: 181 ---------------------------ERKKHRHSKSKRHKDSSPERDYDSEDVSPE--- 240

Query: 241 KDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNERDHK 300
                                     +                     RR         K
Sbjct: 241 -------------------------RQ---------------------RR---------K 300

Query: 301 DDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHDS-AE 360
            D DKSSRHD HS+SEDRR + + KNER+ DRGSKYAA+T+YDQSD K+ K+N HDS A+
Sbjct: 301 HDHDKSSRHDGHSHSEDRRSKAETKNERDRDRGSKYAARTSYDQSDRKTFKSNPHDSAAD 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERAARL 420
           R+HDRSKR+RDSYA N++ SRRVGE R YE NASETP+ESRH+HRRP TKLSEEERAARL
Sbjct: 361 RYHDRSKRDRDSYATNDRDSRRVGELRYYESNASETPNESRHRHRRPTTKLSEEERAARL 417

Query: 421 REMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           REMQQDAELHEEQR++RLK+A EDDALEAKQN AVPSS+NFLD AQK MY AEKGGSSTI
Sbjct: 421 REMQQDAELHEEQRFKRLKKADEDDALEAKQN-AVPSSRNFLDMAQKRMYSAEKGGSSTI 417

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 504
           EESIRRRTYYSQGKS IEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSQIEANAFRR 417

[Close]

BLAST of CmaCh04G003680 vs. TrEMBL
Match: A0A103XTQ7_CYNCS (CBF1-interacting co-repressor CIR, N-terminal domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_001213 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 3.9e-95
Identity = 264/510 (51.76%), Postives = 329/510 (64.51%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKH+AEQKKLEELRKQIHEE+ER EFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQKKLEELRKQIHEERERSEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLY+SGLAVGK + SDGFK+LE+ P+ + P     PSS+ +A+ PGALF D
Sbjct: 61  LVPKQERLDFLYDSGLAVGKGN-SDGFKALESFPAKAEP---EQPSSANKASTPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SANDAWRKLHSDPLL+I+QREQ+ALARV+NNP+QMAMI K+VE +KHKEK  D ++ 
Sbjct: 121 KPQSANDAWRKLHSDPLLLIKQREQEALARVKNNPVQMAMIHKSVEAKKHKEKTSDGEKH 180

Query: 181 RKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKH-----DDNSYSEDRRITDYK 240
           ++KH R K KH                   KH    SSKH     DD    E +R T   
Sbjct: 181 KEKHHRKKLKH------------------EKH---TSSKHHINSDDDVGQGEGQRSTSSS 240

Query: 241 NERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKN 300
           +    K +       D   Y  +R     + +DH   +      +DHF S+  +R     
Sbjct: 241 HYSKHKRNIQTERVRDGDRYQHER----YHGKDHFGPQSTKRDREDHFSSQSAKRE---- 300

Query: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTT-YDQSDLKSSKTNS 360
           + DH   +      +DHS S+  +R          DR   Y++Q+   D+ D   S++  
Sbjct: 301 KEDHFGSQSTKRDREDHSGSQSTKR----------DREGHYSSQSAKRDKEDHFGSQSAK 360

Query: 361 HDSAERHHDRS-KRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEE 420
            D A+    +S KR+R+ +  ++   +R GE R + P       E  H  R  + KLSEE
Sbjct: 361 RDEADHSGSQSAKRDREDHIGSQS-GKRDGEDRKHLPPRHHKVGE--HNRRNSSMKLSEE 420

Query: 421 ERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEK 480
           ERAA+L+EMQ DAE+HEEQRW+RLKQAA+DDA EA +  A  S +NFLDAA KS++GAEK
Sbjct: 421 ERAAKLKEMQMDAEVHEEQRWKRLKQAADDDAKEATR--ASSSGRNFLDAAHKSVFGAEK 460

Query: 481 GGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           GGSSTIEES+RRRT+YSQ +S  E NAFRR
Sbjct: 481 GGSSTIEESVRRRTHYSQRRS--EENAFRR 460

[Close]

BLAST of CmaCh04G003680 vs. TrEMBL
Match: W9R253_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017969 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 9.6e-94
Identity = 262/509 (51.47%), Postives = 314/509 (61.69%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQI EEKER EFR LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQILEEKERAEFRQLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLP------STSTPAASSDPSSSKEAAVP 120
           LVPKQERLDFLYESGLAVGKAS S+GFK+LE  P      S+S  AAS+  +SS  +AVP
Sbjct: 61  LVPKQERLDFLYESGLAVGKASASEGFKALEAFPKPGDAPSSSASAASNQAASS--SAVP 120

Query: 121 GALFVDKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKN 180
           GALF +K  SANDAWRKLHSDPLL+IRQREQ ALAR++NNP+QMA IRK+VEG+  K + 
Sbjct: 121 GALFEEKPQSANDAWRKLHSDPLLMIRQREQDALARIKNNPVQMARIRKSVEGKGKKSR- 180

Query: 181 PDHKRDRKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDY 240
            D K  RKKHR S  KH                           KH  +   E+RR +  
Sbjct: 181 -DEKEHRKKHRDSSSKH--------------------------QKHSSSGKEEERRKS-- 240

Query: 241 KNERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYK 300
                      KS+ HD HS SE+ R   +          KSS HD H        +D  
Sbjct: 241 ----------RKSANHDKHSDSEEERRKSR----------KSSNHDKH--------SD-- 300

Query: 301 NERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNS 360
                               SED  RR   ++ERN  R SKY   +   QS  ++ K + 
Sbjct: 301 --------------------SEDESRRKSSRSERNGYRSSKYKEHSLGGQSGPETVKDSR 360

Query: 361 HDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEE 420
           H   + ++DRS++E+                       +E   ES ++ R  A KLSEEE
Sbjct: 361 H-FVKGNNDRSEKEK---------------------YPTEDRSESHYRRRNVAPKLSEEE 403

Query: 421 RAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKG 480
           RAARLREMQ DAE+HEEQRW+RLK+A  DDA +A ++ A+   KNFLDAAQK++YGAE+G
Sbjct: 421 RAARLREMQMDAEVHEEQRWKRLKKAEVDDARQASRD-AISKGKNFLDAAQKNVYGAEEG 403

Query: 481 GSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           GSS+I ES+RRRT+YSQG+S+ + NAFRR
Sbjct: 481 GSSSIAESVRRRTHYSQGRSE-QGNAFRR 403

[Close]

BLAST of CmaCh04G003680 vs. TrEMBL
Match: A0A0S3S470_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G101000 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.3e-92
Identity = 256/513 (49.90%), Postives = 328/513 (63.94%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQI EE+ER EFRLLQE+AG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIQEERERTEFRLLQEKAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVP QERL+FLY+SGL+VGK+S S+GFK+LE LP +    A S  +S + A+VPGALF +
Sbjct: 61  LVPHQERLEFLYDSGLSVGKSSNSEGFKALEQLPKSDGTDAPSSSASKEGASVPGALFEE 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SANDAWRKLHSDPLL+IRQREQ+ALA+++NNP++MAMI+K++EG  HKEK   HK++
Sbjct: 121 KPQSANDAWRKLHSDPLLMIRQREQEALAKIKNNPVKMAMIKKSIEGTDHKEK--AHKKE 180

Query: 181 -RKKHRRSKFKHFSPERDHDSEDASPE-RQRRKHGHDKSSKHD----DNSYSEDRRITDY 240
            RKKHR SK KH   ++  DSED   E R+RR    D   KH+    D+ Y    R    
Sbjct: 181 KRKKHRSSKSKH---KKHSDSEDDPTEGRKRRTDNEDIDKKHNKAQSDSGYESGERENRR 240

Query: 241 KNERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYK 300
           K+  +DK  R++S  H      + R+   K+  +  DDR+                    
Sbjct: 241 KDRYEDKKYRERSPSH------QQRQRKGKDYEEGADDRNHG------------------ 300

Query: 301 NERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNS 360
                   R KS R    + S      D  K  RN+    KY  ++   Q   ++ K   
Sbjct: 301 --------RSKSERSVYDAQSNPGYESDGGKRRRNHYEDRKYRERSPGHQQRQRNGKDYK 360

Query: 361 HDSAERHHDRSKRERDSYANNEKV-SRRVGESRSYEPNA---SETPHESRHKHRRPATKL 420
            D  +R+++RSK ER +  +   + + + G  R  E ++   S + HE  +K R  A KL
Sbjct: 361 EDGGDRNYNRSKSERYASEDKSNIDAPKSGGERFSETSSNRYSASSHERGYKRRNVAPKL 420

Query: 421 SEEERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYG 480
           SEEERA +LR+MQ  AE+HEEQRW+R+K+A E DA E  Q+      KNFLD+ QKS+YG
Sbjct: 421 SEEERAEKLRQMQLAAEVHEEQRWKRIKKAEESDAREVVQSNNA-GGKNFLDSTQKSVYG 475

Query: 481 AEKGGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           A +GGS++I ES+RRRTYYSQG+S  E NAFRR
Sbjct: 481 AGEGGSASIAESVRRRTYYSQGRSGGEGNAFRR 475

[Close]

BLAST of CmaCh04G003680 vs. TrEMBL
Match: A0A0R0G8I6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G123900 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.0e-91
Identity = 255/513 (49.71%), Postives = 338/513 (65.89%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQI EE+ER EFRLLQE+AG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIQEERERTEFRLLQEKAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLP---STSTPAASSDPSSSKE-AAVPGA 120
           LVP QERL+FLY+SGL+VGK++ S+GFK+LE LP   +T    A S  S+SKE A+V GA
Sbjct: 61  LVPHQERLEFLYDSGLSVGKSANSEGFKALEQLPKSDATDAAGAGSSASASKEGASVLGA 120

Query: 121 LFVDKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPD 180
           LF +K  SANDAWRKLHSDPLL+IRQREQ+ALA+++NNP+QMA+I+K++EG ++KEK   
Sbjct: 121 LFEEKPQSANDAWRKLHSDPLLMIRQREQEALAKIKNNPVQMAIIKKSIEGTENKEK-VY 180

Query: 181 HKRDRKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKN 240
            K  RKKH  SK KH   ++  DSED + ER++RK G++ S K    + S+    ++Y++
Sbjct: 181 KKEKRKKHWSSKSKH---KKQSDSEDDTTERRKRKTGNEVSDKKHHKAQSD----SEYQS 240

Query: 241 ERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNE 300
              +   R +  R++D  Y E   +  + +R+ KD            Y +D    +Y   
Sbjct: 241 SEGEM--RRRKDRYEDKKYRERSPSHQQRQRNGKD------------YKEDAGDRNYNRS 300

Query: 301 RDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHD 360
           R  +  + K      +  SE  +RR      +NY  G K   ++   Q   ++ +    D
Sbjct: 301 RSERSVQ-KGQLDSGYESSEGEKRR------KNYYEGKKCRERSPNHQQRQRNGRDYKED 360

Query: 361 SAERHHDRSKRER---DSYANNEKVSR---RVGESRSYEPNASETPHESRHKHRRPATKL 420
           + +R+++ SK ER   + ++N +       R+ E+ S   +AS   H S +K R  A KL
Sbjct: 361 TGDRNYNTSKSERYASEGWSNIDAPKSGGGRISEASSNRYSASSPEHGSHYKCRNVAPKL 420

Query: 421 SEEERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYG 480
           SEEERA +L++MQ  AELHEEQRW+R+K+A E D  EA QN  V   KNFLD  QKS+YG
Sbjct: 421 SEEERAVKLKQMQLAAELHEEQRWKRIKKAEESDTKEAIQNDNV-CGKNFLDTVQKSVYG 480

Query: 481 AEKGGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           A +GGS++I ES+RRRTYYSQG+S  E NAFRR
Sbjct: 481 AAEGGSTSIAESVRRRTYYSQGRSGGEGNAFRR 483

[Close]

BLAST of CmaCh04G003680 vs. TAIR10
Match: AT2G44200.1 (AT2G44200.1 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor)

HSP 1 Score: 315.8 bits (808), Expect = 5.1e-86
Identity = 247/518 (47.68%), Postives = 320/518 (61.78%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           M +KFLNKKGWHTGSLRNIE VWKAEQK EAEQKKLEELR QI +E+ER EFR LQEQAG
Sbjct: 1   MGMKFLNKKGWHTGSLRNIETVWKAEQKQEAEQKKLEELRLQILQERERSEFRALQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSL--ETLPSTSTPAASSDPSSSKEAAVPGALF 120
           L+P+QERL+FLY+SGLAVGK S S    S   E  P   + A SS  S   + + PGALF
Sbjct: 61  LIPRQERLEFLYDSGLAVGKGSASGSGVSFQKEEQPLAKSEAGSS-ASEKPDQSAPGALF 120

Query: 121 VDKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHK 180
            +K  SAND+WRKLHSDPLL+IRQREQ+ALA+++NNP++MA+IRK+VE EK K K+ D K
Sbjct: 121 EEKAQSANDSWRKLHSDPLLLIRQREQEALAKIKNNPVKMALIRKSVE-EKGKGKDGDTK 180

Query: 181 RDRKKHRRSKFKH----FSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDY 240
             +KKH+R   KH     S +R    ED+  E   RK  H K+S   D  Y   R  +D 
Sbjct: 181 EHKKKHKRKSGKHQKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPR--SDL 240

Query: 241 KNERDDKDDRD------KSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDR 300
           ++E   ++ RD      +S   D H   E   T Y+  R   DD  K     D+ Y  +R
Sbjct: 241 EDESKGRESRDRHYEKRRSELDDGHKRRERHDTHYERRRSEMDDESKRRESRDNHY--ER 300

Query: 301 RRTDYKNERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLK 360
           RR+D  +E   ++  DK          ++ +RR+     R  D           D+   +
Sbjct: 301 RRSDLDDESKRRESHDKHFERQRSDLDDEYKRRESQDKRRRSD---------IDDEPKRR 360

Query: 361 SSKTNSHDSAERHHDRSKR---ERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRR 420
            ++ N     E++ +RS +   ER+    N K   +  + R  E   S  P+E +++ R+
Sbjct: 361 DARPN-----EKYRNRSPKGGVERE----NLKSYGQEDKKRKAEDLDSGKPNEYQNRRRK 420

Query: 421 PATKLSEEERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQ 480
             +KLSEEERAARL++MQ DAE+HEEQRW RLK+A E DA+EA +N  V + K+FLD A 
Sbjct: 421 GGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKN-KVSTGKSFLDDAN 480

Query: 481 KSMYGAEKGGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           KS+YG EKGGSSTIEES+RRR+YYSQ  +  E NAFRR
Sbjct: 481 KSVYGVEKGGSSTIEESVRRRSYYSQRGTAAEGNAFRR 493

[Close]

BLAST of CmaCh04G003680 vs. TAIR10
Match: AT2G44195.1 (AT2G44195.1 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-32
Identity = 82/149 (55.03%), Postives = 100/149 (67.11%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGS+RN+E VWKAEQKHEAEQ+K+E          ER EFR +QEQAG
Sbjct: 1   MALKFLNKKGWHTGSIRNVEKVWKAEQKHEAEQEKIE----------ERSEFRAIQEQAG 60

Query: 61  LVPKQ-ERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALF- 120
           LVP++ ERL+FLY+  LAV K          + + S+       +      A +PGALF 
Sbjct: 61  LVPRRPERLEFLYDPELAVAK----------QNVSSSRHGVLFQNQDQRARATIPGALFD 120

Query: 121 -VDKLPSANDAWRKLHSDPLLIIRQREQQ 147
             DK  SAND+WRK HSDPLL+IRQ+EQ+
Sbjct: 121 DDDKRHSANDSWRKFHSDPLLLIRQKEQE 129

[Close]

BLAST of CmaCh04G003680 vs. TAIR10
Match: AT5G47200.1 (AT5G47200.1 RAB GTPase homolog 1A)

HSP 1 Score: 51.2 bits (121), Expect = 2.3e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 504 DYLFKLLLIGDSGVGKSCLLLRFA 528
           DYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFA 29

[Close]

BLAST of CmaCh04G003680 vs. TAIR10
Match: AT4G17530.1 (AT4G17530.1 RAB GTPase homolog 1C)

HSP 1 Score: 51.2 bits (121), Expect = 2.3e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 504 DYLFKLLLIGDSGVGKSCLLLRFA 528
           DYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFA 29

[Close]

BLAST of CmaCh04G003680 vs. TAIR10
Match: AT1G02130.1 (AT1G02130.1 RAS 5)

HSP 1 Score: 50.1 bits (118), Expect = 5.2e-06
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 504 DYLFKLLLIGDSGVGKSCLLLRFA 528
           DYLFKLLLIGDSGVGKSCLLLRF+
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFS 29

[Close]

BLAST of CmaCh04G003680 vs. NCBI nr
Match: gi|449458323|ref|XP_004146897.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cucumis sativus])

HSP 1 Score: 540.4 bits (1391), Expect = 3.6e-150
Identity = 340/504 (67.46%), Postives = 371/504 (73.61%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKAS SDGFKSLETLPS+ST AA+++PSSSKEAAVPGALF D
Sbjct: 61  LVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAATEPSSSKEAAVPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SAND WRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVE EKHK+KNPD KR 
Sbjct: 121 KPHSANDTWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR- 180

Query: 181 RKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKNERDD 240
                                      +R+KH H KS +H D+S   D    D   E   
Sbjct: 181 ---------------------------ERKKHRHSKSKRHKDSSPERDYDSEDVSPE--- 240

Query: 241 KDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKNERDHK 300
                                     +                     RR         K
Sbjct: 241 -------------------------RQ---------------------RR---------K 300

Query: 301 DDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHDS-AE 360
            D DKSSRHD HS+SEDRR + + KNER+ DRGSKYAA+T+YDQSD K+ K+N HDS A+
Sbjct: 301 HDHDKSSRHDGHSHSEDRRSKAETKNERDRDRGSKYAARTSYDQSDRKTFKSNPHDSAAD 360

Query: 361 RHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERAARL 420
           R+HDRSKR+RDSYA N++ SRRVGE R YE NASETP+ESRH+HRRP TKLSEEERAARL
Sbjct: 361 RYHDRSKRDRDSYATNDRDSRRVGELRYYESNASETPNESRHRHRRPTTKLSEEERAARL 417

Query: 421 REMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGSSTI 480
           REMQQDAELHEEQR++RLK+A EDDALEAKQN AVPSS+NFLD AQK MY AEKGGSSTI
Sbjct: 421 REMQQDAELHEEQRFKRLKKADEDDALEAKQN-AVPSSRNFLDMAQKRMYSAEKGGSSTI 417

Query: 481 EESIRRRTYYSQGKSDIEANAFRR 504
           EESIRRRTYYSQGKS IEANAFRR
Sbjct: 481 EESIRRRTYYSQGKSQIEANAFRR 417

[Close]

BLAST of CmaCh04G003680 vs. NCBI nr
Match: gi|659107773|ref|XP_008453851.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cucumis melo])

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 290/507 (57.20%), Postives = 326/507 (64.30%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKL+ELRKQI EEKERQEFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLDELRKQILEEKERQEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLYESGLAVGKAS SDGFKSLETLPS+ST AA+++PSSSKEAA PGALF D
Sbjct: 61  LVPKQERLDFLYESGLAVGKASSSDGFKSLETLPSSSTAAAATEPSSSKEAAAPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SANDAWRKLHSDPLLIIRQREQQALARV+NNPIQMAMIRKTVE EKHK+KNPD KR 
Sbjct: 121 KPHSANDAWRKLHSDPLLIIRQREQQALARVKNNPIQMAMIRKTVEVEKHKDKNPDDKR- 180

Query: 181 RKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYKNERD- 240
                                      +R+KH H KS +H D+S   D    D   ER  
Sbjct: 181 ---------------------------ERKKHRHSKSKRHKDSSPERDYDSEDASPERQR 240

Query: 241 DKDDRDKSSRHDDHSYSEDRRT--DYKNERDHKDDRDKSSRHDDH-FYSKDRRRTDYKNE 300
            K D DKSSRHD HS+SEDRR+  D KNER    DRD+ S++     Y +  R+T   N 
Sbjct: 241 RKHDHDKSSRHDGHSHSEDRRSKADSKNER----DRDRGSKYAARTSYDQSDRKTSKSNP 300

Query: 301 RDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNSHD 360
           RD   D     RH D S     +R  D  +  N D+ S+   +  Y +         SH 
Sbjct: 301 RDSAAD-----RHHDRS-----KRDRDRDSHANNDKDSRRVGEPRYYE---------SHA 360

Query: 361 SAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEERA 420
           S   +  R +  R +                     SE    +R +  +   +L EE+R 
Sbjct: 361 SETPNESRHRHRRPT------------------TKLSEEERAARLREMQQDAELHEEQRW 419

Query: 421 ARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKGGS 480
            RL++                   AEDDALEAKQN AVPSS+NFLD AQK MYGAEKGGS
Sbjct: 421 KRLKKA------------------AEDDALEAKQN-AVPSSRNFLDTAQKRMYGAEKGGS 419

Query: 481 STIEESIRRRTYYSQGKSDIEANAFRR 504
           STIEESIRRRTYYSQGKS+IEANAFRR
Sbjct: 481 STIEESIRRRTYYSQGKSEIEANAFRR 419

[Close]

BLAST of CmaCh04G003680 vs. NCBI nr
Match: gi|747095900|ref|XP_011095849.1| (PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Sesamum indicum])

HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97
Identity = 264/510 (51.76%), Postives = 339/510 (66.47%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEE+ER EFR LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEERERAEFRQLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLY+SGLAVGK     GFK+LE+LP T     +S  +S+K++  PGALF D
Sbjct: 61  LVPKQERLDFLYDSGLAVGKGGS--GFKALESLPKTDPETTASTSTSAKQSEAPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEG--EKHKEKNPDHK 180
           K  SANDAWRKLHSDPLL+IRQREQ+ALARV+NNPIQMAMIRK+V+   +K K+++ D +
Sbjct: 121 KPQSANDAWRKLHSDPLLLIRQREQEALARVKNNPIQMAMIRKSVQAKNDKDKDQDKDER 180

Query: 181 RDRKKHRRSKFKH---FSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDYK 240
           + RKKH R K KH    S E D DSED      +++  H K SK D +S     R+  + 
Sbjct: 181 KHRKKHHRKKSKHRKHSSSENDSDSEDDVVTVGKQEDRHQKGSKTDKHS-----RMAAHT 240

Query: 241 NERDDKDDRDKSSRHDDHSYSEDRRTDYKNER-DHKDDRDKSSRHDDHFYSKDRRRTDYK 300
           ++++  ++  +  ++ D  Y + R +   N + D  DD+ KS                  
Sbjct: 241 SDKELSEEDARRKKYYDKEYKDRRPSGTHNPKYDKSDDQQKS------------------ 300

Query: 301 NERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNER-NYDRGSKYAAQTTYDQSDLKSSKTN 360
             R++KD R   + +  +  S D+++R+ YK+ R +     KY  +      D + +K +
Sbjct: 301 --REYKDRRPSGTHNPINDKSNDQQKRE-YKDRRPSGSHSPKYNKR-----DDQQKNKRS 360

Query: 361 SHDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEE 420
            HDS           R+ Y++  +V  R  + RS+  ++ + P    +  RR   KLSEE
Sbjct: 361 YHDS----------RREEYSSERQVESR-HDKRSHFNSSDKPPMHDSNNRRRNTVKLSEE 420

Query: 421 ERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEK 480
           ERAARLREMQ DAE HEEQRW+RLK+AA+ DA EA  + A PS +NFLDAAQKS+YGAEK
Sbjct: 421 ERAARLREMQMDAERHEEQRWKRLKKAADSDAQEAIHDNA-PSGRNFLDAAQKSIYGAEK 465

Query: 481 GGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           GGSSTIEES+RRRT+Y QG+S  ++NAFRR
Sbjct: 481 GGSSTIEESVRRRTHYLQGRSASDSNAFRR 465

[Close]

BLAST of CmaCh04G003680 vs. NCBI nr
Match: gi|976909598|gb|KVH96690.1| (CBF1-interacting co-repressor CIR, N-terminal domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 357.1 bits (915), Expect = 5.6e-95
Identity = 264/510 (51.76%), Postives = 329/510 (64.51%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKH+AEQKKLEELRKQIHEE+ER EFRLLQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQKKLEELRKQIHEERERSEFRLLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLPSTSTPAASSDPSSSKEAAVPGALFVD 120
           LVPKQERLDFLY+SGLAVGK + SDGFK+LE+ P+ + P     PSS+ +A+ PGALF D
Sbjct: 61  LVPKQERLDFLYDSGLAVGKGN-SDGFKALESFPAKAEP---EQPSSANKASTPGALFED 120

Query: 121 KLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKNPDHKRD 180
           K  SANDAWRKLHSDPLL+I+QREQ+ALARV+NNP+QMAMI K+VE +KHKEK  D ++ 
Sbjct: 121 KPQSANDAWRKLHSDPLLLIKQREQEALARVKNNPVQMAMIHKSVEAKKHKEKTSDGEKH 180

Query: 181 RKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKH-----DDNSYSEDRRITDYK 240
           ++KH R K KH                   KH    SSKH     DD    E +R T   
Sbjct: 181 KEKHHRKKLKH------------------EKH---TSSKHHINSDDDVGQGEGQRSTSSS 240

Query: 241 NERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYKN 300
           +    K +       D   Y  +R     + +DH   +      +DHF S+  +R     
Sbjct: 241 HYSKHKRNIQTERVRDGDRYQHER----YHGKDHFGPQSTKRDREDHFSSQSAKRE---- 300

Query: 301 ERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTT-YDQSDLKSSKTNS 360
           + DH   +      +DHS S+  +R          DR   Y++Q+   D+ D   S++  
Sbjct: 301 KEDHFGSQSTKRDREDHSGSQSTKR----------DREGHYSSQSAKRDKEDHFGSQSAK 360

Query: 361 HDSAERHHDRS-KRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEE 420
            D A+    +S KR+R+ +  ++   +R GE R + P       E  H  R  + KLSEE
Sbjct: 361 RDEADHSGSQSAKRDREDHIGSQS-GKRDGEDRKHLPPRHHKVGE--HNRRNSSMKLSEE 420

Query: 421 ERAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEK 480
           ERAA+L+EMQ DAE+HEEQRW+RLKQAA+DDA EA +  A  S +NFLDAA KS++GAEK
Sbjct: 421 ERAAKLKEMQMDAEVHEEQRWKRLKQAADDDAKEATR--ASSSGRNFLDAAHKSVFGAEK 460

Query: 481 GGSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           GGSSTIEES+RRRT+YSQ +S  E NAFRR
Sbjct: 481 GGSSTIEESVRRRTHYSQRRS--EENAFRR 460

[Close]

BLAST of CmaCh04G003680 vs. NCBI nr
Match: gi|703098936|ref|XP_010096517.1| (hypothetical protein L484_017969 [Morus notabilis])

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 262/509 (51.47%), Postives = 314/509 (61.69%), Query Frame = 1


Query: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEEKERQEFRLLQEQAG 60
           MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQI EEKER EFR LQEQAG
Sbjct: 1   MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQILEEKERAEFRQLQEQAG 60

Query: 61  LVPKQERLDFLYESGLAVGKASESDGFKSLETLP------STSTPAASSDPSSSKEAAVP 120
           LVPKQERLDFLYESGLAVGKAS S+GFK+LE  P      S+S  AAS+  +SS  +AVP
Sbjct: 61  LVPKQERLDFLYESGLAVGKASASEGFKALEAFPKPGDAPSSSASAASNQAASS--SAVP 120

Query: 121 GALFVDKLPSANDAWRKLHSDPLLIIRQREQQALARVRNNPIQMAMIRKTVEGEKHKEKN 180
           GALF +K  SANDAWRKLHSDPLL+IRQREQ ALAR++NNP+QMA IRK+VEG+  K + 
Sbjct: 121 GALFEEKPQSANDAWRKLHSDPLLMIRQREQDALARIKNNPVQMARIRKSVEGKGKKSR- 180

Query: 181 PDHKRDRKKHRRSKFKHFSPERDHDSEDASPERQRRKHGHDKSSKHDDNSYSEDRRITDY 240
            D K  RKKHR S  KH                           KH  +   E+RR +  
Sbjct: 181 -DEKEHRKKHRDSSSKH--------------------------QKHSSSGKEEERRKS-- 240

Query: 241 KNERDDKDDRDKSSRHDDHSYSEDRRTDYKNERDHKDDRDKSSRHDDHFYSKDRRRTDYK 300
                      KS+ HD HS SE+ R   +          KSS HD H        +D  
Sbjct: 241 ----------RKSANHDKHSDSEEERRKSR----------KSSNHDKH--------SD-- 300

Query: 301 NERDHKDDRDKSSRHDDHSYSEDRRRRDDYKNERNYDRGSKYAAQTTYDQSDLKSSKTNS 360
                               SED  RR   ++ERN  R SKY   +   QS  ++ K + 
Sbjct: 301 --------------------SEDESRRKSSRSERNGYRSSKYKEHSLGGQSGPETVKDSR 360

Query: 361 HDSAERHHDRSKRERDSYANNEKVSRRVGESRSYEPNASETPHESRHKHRRPATKLSEEE 420
           H   + ++DRS++E+                       +E   ES ++ R  A KLSEEE
Sbjct: 361 H-FVKGNNDRSEKEK---------------------YPTEDRSESHYRRRNVAPKLSEEE 403

Query: 421 RAARLREMQQDAELHEEQRWRRLKQAAEDDALEAKQNAAVPSSKNFLDAAQKSMYGAEKG 480
           RAARLREMQ DAE+HEEQRW+RLK+A  DDA +A ++ A+   KNFLDAAQK++YGAE+G
Sbjct: 421 RAARLREMQMDAEVHEEQRWKRLKKAEVDDARQASRD-AISKGKNFLDAAQKNVYGAEEG 403

Query: 481 GSSTIEESIRRRTYYSQGKSDIEANAFRR 504
           GSS+I ES+RRRT+YSQG+S+ + NAFRR
Sbjct: 481 GSSSIAESVRRRTHYSQGRSE-QGNAFRR 403

The following BLAST results are available for this feature:

BLAST of CmaCh04G003680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CWC25_HUMAN	2.7e-12	29.11	Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25 PE=1 SV=1	[more]
CWC25_ASPFU	4.3e-10	29.41	Pre-mRNA-splicing factor cwc25 OS=Neosartorya fumigata (strain ATCC MYA-4609 / A...	[more]

BLAST of CmaCh04G003680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU62_CUCSA	2.5e-150	67.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025080 PE=4 SV=1	[more]
A0A103XTQ7_CYNCS	3.9e-95	51.76	CBF1-interacting co-repressor CIR, N-terminal domain-containing protein OS=Cynar...	[more]
W9R253_9ROSA	9.6e-94	51.47	Uncharacterized protein OS=Morus notabilis GN=L484_017969 PE=4 SV=1	[more]
A0A0S3S470_PHAAN	5.3e-92	49.90	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G101000 PE=...	[more]
A0A0R0G8I6_SOYBN	2.0e-91	49.71	Uncharacterized protein OS=Glycine max GN=GLYMA_15G123900 PE=4 SV=1	[more]

BLAST of CmaCh04G003680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44200.1	5.1e-86	47.68	CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing fact...	[more]
AT2G44195.1	1.9e-32	55.03	CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing fact...	[more]
AT5G47200.1	2.3e-06	100.00	RAB GTPase homolog 1A	[more]
AT4G17530.1	2.3e-06	100.00	RAB GTPase homolog 1C	[more]
AT1G02130.1	5.2e-06	95.83	RAS 5	[more]

BLAST of CmaCh04G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458323\|ref\|XP_004146897.1\|	3.6e-150	67.46	PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cucumis sativus]	[more]
gi\|659107773\|ref\|XP_008453851.1\|	2.2e-107	57.20	PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Cucumis melo]	[more]
gi\|747095900\|ref\|XP_011095849.1\|	2.1e-97	51.76	PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Sesamum indicum]	[more]
gi\|976909598\|gb\|KVH96690.1\|	5.6e-95	51.76	CBF1-interacting co-repressor CIR, N-terminal domain-containing protein [Cynara ...	[more]
gi\|703098936\|ref\|XP_010096517.1\|	1.4e-93	51.47	hypothetical protein L484_017969 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019339	CIR_N_dom
IPR022209	CWC25
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G003680.1	CmaCh04G003680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	PFAM	PF10197	Cir_N	coord: 11..46 score: 5.7
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	SMART	SM01083	Cir_N_3	coord: 10..46 score: 9.9
IPR022209	Pre-mRNA splicing factor	PFAM	PF12542	CWC25	coord: 64..155 score: 4.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 503..527 score: 1.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 503..527 score: 5.7
None	No IPR available	unknown	Coil	Coil	coord: 22..49 scor
None	No IPR available	PANTHER	PTHR16196	CELL CYCLE CONTROL PROTEIN CWF25	coord: 2..503 score: 7.2E
None	No IPR available	PANTHER	PTHR16196:SF0	PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOG	coord: 2..503 score: 7.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G003680	Cucsa.094010	Cucumber (Gy14) v1	cgycmaB0203
CmaCh04G003680	Cla010701	Watermelon (97103) v1	cmawmB693
CmaCh04G003680	Csa4G025080	Cucumber (Chinese Long) v2	cmacuB710
CmaCh04G003680	MELO3C017635	Melon (DHL92) v3.5.1	cmameB702
CmaCh04G003680	ClCG07G017100	Watermelon (Charleston Gray)	cmawcgB669
CmaCh04G003680	CSPI04G04220	Wild cucumber (PI 183967)	cmacpiB716
CmaCh04G003680	CmoCh04G003880	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G003680	CmoCh16G002450	Cucurbita moschata (Rifu)	cmacmoB701
CmaCh04G003680	Lsi07G001280	Bottle gourd (USVL1VR-Ls)	cmalsiB696
CmaCh04G003680	Cp4.1LG14g05340	Cucurbita pepo (Zucchini)	cmacpeB715
CmaCh04G003680	Cp4.1LG01g03440	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G003680	MELO3C017635.2	Melon (DHL92) v3.6.1	cmamedB791
CmaCh04G003680	CsaV3_4G004310	Cucumber (Chinese Long) v3	cmacucB0842
CmaCh04G003680	Cla97C07G144130	Watermelon (97103) v2	cmawmbB775
CmaCh04G003680	Bhi01G001996	Wax gourd	cmawgoB0854
CmaCh04G003680	CsGy4G004150	Cucumber (Gy14) v2	cgybcmaB542
CmaCh04G003680	Carg16767	Silver-seed gourd	carcmaB1209
CmaCh04G003680	Carg08041	Silver-seed gourd	carcmaB0529

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G003680	CmaCh16G002260	Cucurbita maxima (Rimu)	cmacmaB351

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G003680	Cucumber (Chinese Long) v3	cmacucB0882
CmaCh04G003680	Watermelon (97103) v2	cmawmbB707
CmaCh04G003680	Wild cucumber (PI 183967)	cmacpiB754
CmaCh04G003680	Cucumber (Chinese Long) v2	cmacuB745
CmaCh04G003680	Watermelon (Charleston Gray)	cmawcgB637
CmaCh04G003680	Bottle gourd (USVL1VR-Ls)	cmalsiB625
CmaCh04G003680	Cucumber (Gy14) v2	cgybcmaB671