Carg05114 (gene) Silver-seed gourd

Overview
NameCarg05114
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein FAR1-RELATED SEQUENCE 5
LocationCucurbita_argyrosperma_scaffold_060 : 1460910 .. 1464387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAATTCTCCAAGTTTTAACGTAAAATCCGATTTCCTTTTCCAAAACGAAGAACAATTTCTTGAATTCCACAAGCGAGAGCGTCCGCAATCCCTAATTTTGTAACTTCAAGAACAGTTGAACATGATTTGTTGCTCTTACTTCACAACCAGTTCTCGCCGTCTAAAACTCATTTCGACGGCCTCACAGTTCGTCGGCAAGATTCTACGCCGTCGCATCCCTTGATCGTTTCAATCAGTGAAGGGGAAGAGATTTCAGTCATACTCTCAAGTTTCTGTTCATTTCATCTTCGATTTGGATGCAAAGCGCTCTGGACGGATTCGGGATTTCGATTCAGTGAGTTCTCATAATCTGTTTCTAGGTTTCCGTTTCGTCTTTTCTTTGTTTTGATTTACATTCTCTGGTTCTTCGCTGCTTGTTCTGAATATTTTGTTGTTCTTTGTTCCAAGTTCATGCCCTAAATTTGCTGCTAATGAATTTTCCCTGGAAGATTCTTGAGCTTGTGCTACATTTTCATTCTTTTCCATAGTTGATTGATAGTTTTACTGCTATTTGGTTAGAAACTGGGCTGCCACTTTCTATGTTGGTTATGTTAATGAATGTGTTGCAGTGAATTTAGACGACGAAACAGGGCGAGCACACGACTCTATTGAGATTAACGGAGATGCAGCTGAAGGAAATTTGATGTTGGAGCCATATGTTGGTATGGAGTTTGATTCTGAAGATGCTGCAAGAAAGTTTTATGTTGAATATGCGACACAGATGGGGTTTGTCGTGCGAATTATGCAGCGACGTTGTTCGGAAATTGATGGAAGAACGTTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCGAATCGAAGAGGGATTTATGGATCAGATAAGAAACCACGGCCTAGTTCACGAGAGGGCTGCAAGGCAACGATTTTGGTGAAAATGGAGAAGTCTGGAAAATGGATCGTTTCAAGAATTGTGAAGGATCACAATCATCCCTTAGTTGTTTGTTCTAATGGTTTCAGCTGCTCGGTGAGTTATTCTGATTCTAGTTTATTTTGTTTGTCCTTTTTTTATGACTATAACTAGAATGAGGCATGGTAACTATAACCGCTCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTTCGGGTTTCCCTTCACGTATGCTTGGGAGAGGTTTCTACACCCTTGTAAGGAATGCTTTGTTCTCCTCCCCAACCAATGTGGATCCCACAATCCACCCCATTCGGGGCCCAGCATCCTTGCTGGCACATTGCTCGGTGTCTGGCTATGATACCATTTGTAACAGCCCAAGCCCACCGTTAGCGATATTGTCATCTCCAATCATTGTATAGTTAGGTAATTCGGGTTCCTAAAGGATTTTGGCTCTAAGTTGTAGGATGAGTTTTCTCCGCCATTCAACTATGCTTCGTAGTTGAAAAGAGTCTATGCTGACTTAGATGCTGTGATACCATGATACCATGCATTAAGTTCCAGGGCCCAGTATCCTTGCTAGTACATTGCCCGGTGTCTGACTATGATACCATTTGTAACAGTCCAAGCCCACCGTTAGCGATATTGTCCTCTCCAATCATTGTATAGTTAGGAAATCCGGGTTCCTATTAAAAGGATTTTGGCTCTAAGTTGTAGGATGAGTTTTCTTTGCCGTTCAACTATGCTTCGTGTTGAAAAAGGGTTTATATTGACTTAGATGCTGTGATACCATGCATTAAGTTCCTTTATTTCTTTGTTTGAATCTATATAAAACTTCTCTTGGTTCTGAAAAACTGTGTAACTTTTGCCTAAATCAATGAAAAATGTATGATTTCTTGGAAAGCATTTAGGAGAAACCTCTCTATTTAATGGAAGAGAATGGAGAGGAGTGATAGACTGCCTTATTAAGGTGTACATAGGGAGATGGTTAGGGTCAGTCGAGTAAAGTCGTTAGCAGGTTGGACCCTATGATAGTAACTGAACTTGGCATGGAACGCTGGTAGTGGCTAGAGCTATTTAGTGTAGGGTGTTACGCTGGTAGTGGCTGATAACATTGAACACGGTAGAAGGTGGAGCAAATAGTGTAGGGTGTTACATAGTTAATGGATTAACACTTGTTTTCTATTTGCATTTGAGAAAATTTGGTATTGATTTTCATTGAAGCCAGTCCAAATGGATAGTTGCATTGCGTGGAGAGATAGTGGTGAAAGGAGAGAATTTGAAAGTTGTGATGCCTTGAGTGGAGATATTTTTGTAACAGCCCAAACCCGCTGCTAGGAGATATTGTTCTCTTTAGACTTTCCCTTTTGAACTTAGTAGAGAGAGCTTTTCACACCCTTATAAGAAATGCTTCATTTCCCTCTCCAATCGATGTGGGATCTCACAATTCACCTCTCTCGGAGGCCCAGTGTCCTCGTTGGCACCAAGCTCACCGCTAACAAATATTGTCTGCTTTGGCCTGTTATGTATCGCCCTCAGCCTCACGGTTTTAAAATGCATCTACTAAAGAGAGGTTTCCACACTCTTATAAGAAATGCTTCGTTCTCCTCTCCAACCCACATGAGATCTCACACATTTGGAGGCTTGAGTGTCCTAAGTGTGTATTGGCTATTGATCTTTGGGGTGCGTCAAAGTTGATTGGACGTAGCTAATTAAATTTGGGTAGGAGATTGGAGGATCTAAGTCTACTCTAATCTCAGGTATCACTCAAGAACGGTACAAAATATAGCTGAAGCTTATGATATTGGGAACTAAATCCCGTCATGGACTTTCAGATAGAAAAATGTAACCTAGATATTATTAGATTAGATTAGATTTGTTCTCTGTTCCATTTGAGGCTCACTGTCTGTATTCTGTAACATGTAGCCAATTGAATACATTGTTCGAGGATTATTGAGGGTGACTCCCACATTAGTTAATTTAGTAGAAGATCATAGGTTTATAAGTAAGGAATACATTTCCGTTGGTACGAGGCCTTTTGGGGAAGCCCAAACCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCGTTGTGGAGAGTCGTGATTCCTAACATATATTTCCTTTACTTTTTAAACTTTGATGTTCTGGGTTTATTCAAATCTACGACGTATAAAGTGAATCGACATTGATACTTGTAGGGTGATAAAGATAAGAAGATCGAGGAACTTAAAATGGAGTTGGAGCATCAAGAGCAACAATGCGTAGCATACCGGGAAAAGCTTTTCGATTTCATCTCAACGGTGGAGGAACAAACAGAAGAATTGTCTTCAAAAATACAAATGATCATCGGCAATGTAAGGCAAGTTGAATCTGGTATGCAAAAACATTATCCATTTCGACAATAGTAAATAAAACTTGAATATGCACAGAGTTGAAAATTTGAGTCTCAATGATGTTCTTGATTTAGTAATGTATAGCAGCCATTGATGCATTGATCTGAAGATGAGAGTATTGAAAGC

mRNA sequence

TTTGAATTCTCCAAGTTTTAACGTAAAATCCGATTTCCTTTTCCAAAACGAAGAACAATTTCTTGAATTCCACAAGCGAGAGCGTCCGCAATCCCTAATTTTGTAACTTCAAGAACAGTTGAACATGATTTGTTGCTCTTACTTCACAACCAGTTCTCGCCGTCTAAAACTCATTTCGACGGCCTCACAGTTCGTCGGCAAGATTCTACGCCGTCGCATCCCTTGATCGTTTCAATCAGTGAAGGGGAAGAGATTTCAGTCATACTCTCAAGTTTCTGTTCATTTCATCTTCGATTTGGATGCAAAGCGCTCTGGACGGATTCGGGATTTCGATTCAAAACTGGGCTGCCACTTTCTATGTTGGTTATGTTAATGAATGTGTTGCAGTGAATTTAGACGACGAAACAGGGCGAGCACACGACTCTATTGAGATTAACGGAGATGCAGCTGAAGGAAATTTGATGTTGGAGCCATATGTTGGTATGGAGTTTGATTCTGAAGATGCTGCAAGAAAGTTTTATGTTGAATATGCGACACAGATGGGGTTTGTCGTGCGAATTATGCAGCGACGTTGTTCGGAAATTGATGGAAGAACGTTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCGAATCGAAGAGGGATTTATGGATCAGATAAGAAACCACGGCCTAGTTCACGAGAGGGCTGCAAGGCAACGATTTTGGTGAAAATGGAGAAGTCTGGAAAATGGATCGTTTCAAGAATTGGTGATAAAGATAAGAAGATCGAGGAACTTAAAATGGAGTTGGAGCATCAAGAGCAACAATGCGTAGCATACCGGGAAAAGCTTTTCGATTTCATCTCAACGGTGGAGGAACAAACAGAAGAATTGTCTTCAAAAATACAAATGATCATCGGCAATGTAAGGCAAGTTGAATCTGGTATGCAAAAACATTATCCATTTCGACAATAGTAAATAAAACTTGAATATGCACAGAGTTGAAAATTTGAGTCTCAATGATGTTCTTGATTTAGTAATGTATAGCAGCCATTGATGCATTGATCTGAAGATGAGAGTATTGAAAGC

Coding sequence (CDS)

ATGCAAAGCGCTCTGGACGGATTCGGGATTTCGATTCAAAACTGGGCTGCCACTTTCTATGTTGGTTATGTTAATGAATGTGTTGCAGTGAATTTAGACGACGAAACAGGGCGAGCACACGACTCTATTGAGATTAACGGAGATGCAGCTGAAGGAAATTTGATGTTGGAGCCATATGTTGGTATGGAGTTTGATTCTGAAGATGCTGCAAGAAAGTTTTATGTTGAATATGCGACACAGATGGGGTTTGTCGTGCGAATTATGCAGCGACGTTGTTCGGAAATTGATGGAAGAACGTTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCGAATCGAAGAGGGATTTATGGATCAGATAAGAAACCACGGCCTAGTTCACGAGAGGGCTGCAAGGCAACGATTTTGGTGAAAATGGAGAAGTCTGGAAAATGGATCGTTTCAAGAATTGGTGATAAAGATAAGAAGATCGAGGAACTTAAAATGGAGTTGGAGCATCAAGAGCAACAATGCGTAGCATACCGGGAAAAGCTTTTCGATTTCATCTCAACGGTGGAGGAACAAACAGAAGAATTGTCTTCAAAAATACAAATGATCATCGGCAATGTAAGGCAAGTTGAATCTGGTATGCAAAAACATTATCCATTTCGACAATAG

Protein sequence

MQSALDGFGISIQNWAATFYVGYVNECVAVNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRIGDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEELSSKIQMIIGNVRQVESGMQKHYPFRQ
Homology
[Close]
BLAST of Carg05114 vs. NCBI nr
Match: XP_022960344.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 1.0e-96
Identity = 187/209 (89.47%), Postives = 189/209 (90.43%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDDETGRAHDSIEINGDAAEGNL+LEPYVGMEFDSEDAARKFYVEYA QMGFVVRIMQ
Sbjct: 1   MNLDDETGRAHDSIEINGDAAEGNLILEPYVGMEFDSEDAARKFYVEYARQMGFVVRIMQ 60

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RRCS IDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV
Sbjct: 61  RRCSGIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 120

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           SRI                  GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT
Sbjct: 121 SRIVKDHNHPLVVCSNGFSCSGDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 180

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQMIIGNVRQVESGMQKHYPFRQ
Sbjct: 181 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 209

[Close]
BLAST of Carg05114 vs. NCBI nr
Match: XP_023004747.1 (uncharacterized protein LOC111497957 isoform X1 [Cucurbita maxima])

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 185/209 (88.52%), Postives = 188/209 (89.95%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDDETGRAHDSIEINGDAAEGNL+LEPYVGMEFDSEDAARKFYVEYA QMGFVVRIMQ
Sbjct: 44  MNLDDETGRAHDSIEINGDAAEGNLILEPYVGMEFDSEDAARKFYVEYARQMGFVVRIMQ 103

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RRCS IDGRTLA+RLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV
Sbjct: 104 RRCSGIDGRTLAQRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 163

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           SRI                  GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT
Sbjct: 164 SRIVKDHNHPLVVCSNGFSCSGDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 223

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQMIIGNVRQVESG QKHYPFRQ
Sbjct: 224 EELSSKIQMIIGNVRQVESGTQKHYPFRQ 252

[Close]
BLAST of Carg05114 vs. NCBI nr
Match: XP_023514649.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 184/209 (88.04%), Postives = 189/209 (90.43%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDDE+GRAHDSIEINGDAAEGNL+LEPYVGMEFDSEDAARKFYVEYA QMGFVVRIMQ
Sbjct: 1   MNLDDESGRAHDSIEINGDAAEGNLILEPYVGMEFDSEDAARKFYVEYARQMGFVVRIMQ 60

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RRCS IDGRTLARRLGCNKQGF+PNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV
Sbjct: 61  RRCSGIDGRTLARRLGCNKQGFAPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 120

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           SRI                  GDKDKKIEELKMELEHQEQ+CVAYREKLFDFISTVEEQT
Sbjct: 121 SRIVKDHNHPLVVCSNGFSCSGDKDKKIEELKMELEHQEQRCVAYREKLFDFISTVEEQT 180

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQMIIGNVRQVESGMQKHYPFRQ
Sbjct: 181 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 209

[Close]
BLAST of Carg05114 vs. NCBI nr
Match: XP_023004748.1 (protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 182/206 (88.35%), Postives = 185/206 (89.81%), Query Frame = 0 

Query: 33  DDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRC 92
           +DETGRAHDSIEINGDAAEGNL+LEPYVGMEFDSEDAARKFYVEYA QMGFVVRIMQRRC
Sbjct: 44  NDETGRAHDSIEINGDAAEGNLILEPYVGMEFDSEDAARKFYVEYARQMGFVVRIMQRRC 103

Query: 93  SEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI 152
           S IDGRTLA+RLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI
Sbjct: 104 SGIDGRTLAQRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI 163

Query: 153 ------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEEL 212
                             GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEEL
Sbjct: 164 VKDHNHPLVVCSNGFSCSGDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEEL 223

Query: 213 SSKIQMIIGNVRQVESGMQKHYPFRQ 221
           SSKIQMIIGNVRQVESG QKHYPFRQ
Sbjct: 224 SSKIQMIIGNVRQVESGTQKHYPFRQ 249

[Close]
BLAST of Carg05114 vs. NCBI nr
Match: XP_022143586.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Momordica charantia])

HSP 1 Score: 313.5 bits (802), Expect = 5.6e-82
Identity = 163/209 (77.99%), Postives = 176/209 (84.21%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDD +G AH+SIE+N DAAEGN+ LEPYVGMEFDSEDAARKFYVEYA QMGFVVRIMQ
Sbjct: 1   MNLDDGSGPAHNSIEVNTDAAEGNVTLEPYVGMEFDSEDAARKFYVEYARQMGFVVRIMQ 60

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RR S IDGRTLARRLGCNKQGFSPN RGIYGSDKK RPS+REGCKATILVKMEKSGKW+V
Sbjct: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGSDKKSRPSAREGCKATILVKMEKSGKWVV 120

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           +R                   GDKDKKIEELKMELEHQEQ CVAYREKLF+FI+ VEEQT
Sbjct: 121 TRFVKDHNHPLVACSNGFNNSGDKDKKIEELKMELEHQEQLCVAYREKLFNFITKVEEQT 180

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQ+IIGN+RQVESG QKH+  RQ
Sbjct: 181 EELSSKIQVIIGNLRQVESGTQKHFSCRQ 209

[Close]
BLAST of Carg05114 vs. TAIR10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 168.7 bits (426), Expect = 4.0e-42
Identity = 94/182 (51.65%), Postives = 122/182 (67.03%), Query Frame = 0 

Query: 52  GNLML-EPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQG 111
           G+L L EPYVG++F+SE+ A+ FYVEY+ ++GFVVR+MQRR S IDGRTLARRLGCNKQG
Sbjct: 3   GDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG 62

Query: 112 FSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSR------------------- 171
           F PN +             REGCKATILVKMEKSGKW+V+R                   
Sbjct: 63  FGPNNQ----XXXXXXXXXREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS 122

Query: 172 IGDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEELSSKIQMIIGNVRQVESG 214
             DK++KI+EL  E+E Q++ C  YR++L  FI  VE  TEELS K++ I+ NV+++E  
Sbjct: 123 FADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQ 180

[Close]
BLAST of Carg05114 vs. TAIR10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37
Identity = 74/173 (42.77%), Postives = 117/173 (67.63%), Query Frame = 0 

Query: 56  LEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGFSPNR 115
           +EP  G+ F+SEDAA+ FY +Y+ ++GFV+R+M  R SE DGR LARR GCNK+G   + 
Sbjct: 20  IEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSI 79

Query: 116 RGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSR-------------------IGDKD 175
           RG +GS +KPRPS+REGCKA I VK ++SGKW++++                   + +KD
Sbjct: 80  RGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKD 139

Query: 176 KKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEELSSKIQMIIGNVRQVE 210
           K+I+EL +EL ++++ C AY+E+L  F   VEE + +++ K++ ++ N+++ E
Sbjct: 140 KRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 192

[Close]
BLAST of Carg05114 vs. TAIR10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-29
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 0 

Query: 51  EGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQG 110
           E + M+EP++GMEF+SE+AA+ FY  YAT MGFV+R+   R S  DG  + RRL CNK+G
Sbjct: 26  EASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEG 85

Query: 111 FSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI------------------ 170
           F  +R       +KPR  +REGCKA I+VK EKSG W+V++                   
Sbjct: 86  FRRSRPR-RSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRN 145

Query: 171 -------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEELSSKIQMIIGNV 211
                   +KD KI EL  EL  + ++C A +++L   +  +EE +  L+  I  +I +V
Sbjct: 146 FQLPQTPDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSV 205

[Close]
BLAST of Carg05114 vs. TAIR10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 108.2 bits (269), Expect = 6.4e-24
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           V+LD       D  E  GD        EPYVG EF+SE AA  FY  YAT++GFV+R+ +
Sbjct: 50  VDLDSIPLAVADMTEAQGD--------EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSK 109

Query: 90  RRCSEIDGRTLARRLGCNKQGFS-PNRRGIYGSDK--KPRPSSREGCKATILVKMEKSGK 149
              S  DG  + R+L CNK+G+  P++R     DK  + R  +R GCKA IL++ E SGK
Sbjct: 110 LSRSRHDGSPIGRQLVCNKEGYRLPSKR-----DKVIRQRAETRVGCKAMILIRKENSGK 169

Query: 150 WIVSRI----------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFI 209
           W++++                        ++  KI+EL  +L  ++++   Y+  L    
Sbjct: 170 WVITKFVKEHNHSLMPGRVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAATYKRHLEMLF 229

[Close]
BLAST of Carg05114 vs. TAIR10
Match: AT4G38180.1 (FAR1-related sequence 5)

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-18
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 54  LMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGF-- 113
           L LEPY G+EF+SE+AA+ FY  YA ++GF  R+   R S  DG  + R+  C K+GF  
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 114 SPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVS 151
              +R      K+PR  +R GCKA++ VKM+ SGKW+VS
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 167


HSP 2 Score: 37.0 bits (84), Expect = 1.8e-02
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 154 DKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQTEELSSKIQMI 202
           + DKKI +L+ ELE   ++C AYR  L   +  +E+Q  ++S K+Q I
Sbjct: 733 EMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780

[Close]
BLAST of Carg05114 vs. Swiss-Prot
Match: sp|Q9SZL8|FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 54  LMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGF-- 113
           L LEPY G+EF+SE+AA+ FY  YA ++GF  R+   R S  DG  + R+  C K+GF  
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 114 SPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVS 151
              +R      K+PR  +R GCKA++ VKM+ SGKW+VS
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 167

[Close]
BLAST of Carg05114 vs. Swiss-Prot
Match: sp|Q3E7I5|FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-13
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 0 

Query: 51  EGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQG 110
           EG   +EPYVG+EFD+ + AR+FY  YA + GF VR  Q   S  DG   +RR  C+K+G
Sbjct: 36  EGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEG 95

Query: 111 FSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI 153
           F  N              SR GC A I V+   +GKW++ +I
Sbjct: 96  FQLN--------------SRTGCTAFIRVQRRDTGKWVLDQI 123

[Close]
BLAST of Carg05114 vs. Swiss-Prot
Match: sp|Q9M8J3|FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 57  EPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGFSPNRR 116
           EPY G+EF+S + A +FY  YA  +GF VRI Q   S++DG   +RR  C+K+GF     
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF----- 248

Query: 117 GIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRI 153
                    +  SR GC A + +K + SG WIV R+
Sbjct: 249 ---------QHPSRMGCGAYMRIKRQDSGGWIVDRL 270

[Close]
BLAST of Carg05114 vs. Swiss-Prot
Match: sp|Q9SWG3|FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 55/176 (31.25%), Postives = 83/176 (47.16%), Query Frame = 0 

Query: 41  DSIEINGDAA-EGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRT 100
           D   I GD    G+L LEP  G++FD+ +AA  FY EYA  MGF   I   R S+     
Sbjct: 33  DEFNIGGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDF 92

Query: 101 LARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRIGDKDKKI 160
           +  +  C++ G +P      GS  +     +  CKA++ VK    GKWI+     KD   
Sbjct: 93  IDAKFACSRYGVTPESES-SGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEF-VKDHNH 152

Query: 161 EELKMELEH-QEQQCVAYREK-LFDFISTVEEQTEELSSKIQMIIGNVRQVESGMQ 214
           E L     H + Q+ V   EK   D +  V E+T+++  ++    G  + + S +Q
Sbjct: 153 ELLPALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLLQ 206

[Close]
BLAST of Carg05114 vs. Swiss-Prot
Match: sp|Q3EBQ3|FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.8e-07
Identity = 31/104 (29.81%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 46  NGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQRRCSEIDGRTLARRLG 105
           +G+ A+   + E   GM+F+S++AA  FY EYA  +GF + I   R S+  G+ +  ++ 
Sbjct: 26  SGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIA 85

Query: 106 CNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 150
           C++ G    +     +   PR   + GCKA + +K ++  KW++
Sbjct: 86  CSRFGTKREK----ATAINPRSCPKTGCKAGLHMKRKEDEKWVI 125

[Close]
BLAST of Carg05114 vs. TrEMBL
Match: tr|A0A0A0K5G0|A0A0A0K5G0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375750 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 6.3e-82
Identity = 162/209 (77.51%), Postives = 175/209 (83.73%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDD +G AH+SIE+N  AA+GNL+LEPYVGMEFDSEDAAR+FY EYA QMGFVVRIMQ
Sbjct: 517 MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 576

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RR S IDGRTLARRLGCNKQGFSPN RGIYG DKK RPS+REGCKATILVKMEKSGKW+V
Sbjct: 577 RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 636

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           +R                   GDKDKKIEELKMELEHQEQ C+AYREKLF+FIS VEEQT
Sbjct: 637 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 696

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQ+IIGNVRQVESGMQKHY  RQ
Sbjct: 697 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 725

[Close]
BLAST of Carg05114 vs. TrEMBL
Match: tr|A0A1S3BS39|A0A1S3BS39_CUCME (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103492594 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 5.3e-81
Identity = 159/209 (76.08%), Postives = 175/209 (83.73%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           +NLDD +G AH+S+E+N DAA+GN++ EPYVGMEFDSEDAAR+FY EYA QMGFVVRIMQ
Sbjct: 1   MNLDDGSGPAHNSVEVNTDAADGNVVSEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RR S IDGRTLARRLGCNKQGFSP+ RGIYG DKK RPS+REGCKATILVKMEKSGKW+V
Sbjct: 61  RRRSGIDGRTLARRLGCNKQGFSPSHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           +R                   GDKDKKIEELKMELEHQEQ C+AYREKLF+FIS VEEQT
Sbjct: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180

Query: 210 EELSSKIQMIIGNVRQVESGMQKHYPFRQ 221
           EELSSKIQ+IIGNVRQVESGMQKHY  RQ
Sbjct: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 209

[Close]
BLAST of Carg05114 vs. TrEMBL
Match: tr|A0A2N9HYE4|A0A2N9HYE4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45274 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.7e-66
Identity = 135/206 (65.53%), Postives = 159/206 (77.18%), Query Frame = 0 

Query: 28  VAVNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRI 87
           V V+L+      ++S+E+N  + EG ++LEPYVGMEFDSEDAARKFYVEYA ++GFVVRI
Sbjct: 9   VTVDLEKGVEVINNSLEVNTGSLEGGVVLEPYVGMEFDSEDAARKFYVEYARRVGFVVRI 68

Query: 88  MQRRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKW 147
           MQRR S IDGRT+ RRLGCNKQGFSPN RG  G +KKPRPS+REGCKATILVKMEKSGKW
Sbjct: 69  MQRRRSGIDGRTIGRRLGCNKQGFSPNHRGTIGPEKKPRPSAREGCKATILVKMEKSGKW 128

Query: 148 IVSRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEE 207
           +V+R                   GDKDKKIEEL MELE Q+Q C AYREKL  F++ VE+
Sbjct: 129 VVTRFEKDHNHPLVVTANGFSTAGDKDKKIEELTMELERQDQLCAAYREKLLSFMNNVED 188

Query: 208 QTEELSSKIQMIIGNVRQVESGMQKH 216
           QTEELSSKIQ+I+ NVR+VES +QKH
Sbjct: 189 QTEELSSKIQVIVDNVRKVESEVQKH 214

[Close]
BLAST of Carg05114 vs. TrEMBL
Match: tr|A0A061DUS5|A0A061DUS5_THECC (Far-red impaired responsive family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_002653 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.0e-64
Identity = 137/203 (67.49%), Postives = 154/203 (75.86%), Query Frame = 0 

Query: 30  VNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFYVEYATQMGFVVRIMQ 89
           V+LD E G   DS E      EG  +LEPYVGMEF+SED ARKFYVEYA Q+GFVVRIMQ
Sbjct: 10  VDLDKEVGTV-DSSEEKTAEPEGREILEPYVGMEFESEDDARKFYVEYARQVGFVVRIMQ 69

Query: 90  RRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIV 149
           RR S IDGRTLARRLGCNKQGFSPN +G +G DKKPRPS+REGCKATILVKMEK+GKW+V
Sbjct: 70  RRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVV 129

Query: 150 SRI------------------GDKDKKIEELKMELEHQEQQCVAYREKLFDFISTVEEQT 209
           +R                   GDKDKKIEEL MEL HQEQ C AYREKLF F++ VEEQT
Sbjct: 130 TRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAYREKLFTFMNNVEEQT 189

Query: 210 EELSSKIQMIIGNVRQVESGMQK 215
           EELSSKIQ+I+ NVR++ES  Q+
Sbjct: 190 EELSSKIQVIVDNVRKLESETQR 211

[Close]
BLAST of Carg05114 vs. TrEMBL
Match: tr|A0A061DMU8|A0A061DMU8_THECC (Far-red impaired responsive family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002653 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64
Identity = 139/218 (63.76%), Postives = 162/218 (74.31%), Query Frame = 0 

Query: 16  AATFYVGYVNECV-AVNLDDETGRAHDSIEINGDAAEGNLMLEPYVGMEFDSEDAARKFY 75
           A+    G ++E + +++LD E G   DS E      EG  +LEPYVGMEF+SED ARKFY
Sbjct: 56  ASQIIFGCLSETLDSMDLDKEVGTV-DSSEEKTAEPEGREILEPYVGMEFESEDDARKFY 115

Query: 76  VEYATQMGFVVRIMQRRCSEIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCK 135
           VEYA Q+GFVVRIMQRR S IDGRTLARRLGCNKQGFSPN +G +G DKKPRPS+REGCK
Sbjct: 116 VEYARQVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCK 175

Query: 136 ATILVKMEKSGKWIVSRI------------------GDKDKKIEELKMELEHQEQQCVAY 195
           ATILVKMEK+GKW+V+R                   GDKDKKIEEL MEL HQEQ C AY
Sbjct: 176 ATILVKMEKTGKWVVTRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAY 235

Query: 196 REKLFDFISTVEEQTEELSSKIQMIIGNVRQVESGMQK 215
           REKLF F++ VEEQTEELSSKIQ+I+ NVR++ES  Q+
Sbjct: 236 REKLFTFMNNVEEQTEELSSKIQVIVDNVRKLESETQR 272

The following BLAST results are available for this feature:
BLAST of Carg05114 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960344.11.0e-9689.47protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata][more]
XP_023004747.11.5e-9588.52uncharacterized protein LOC111497957 isoform X1 [Cucurbita maxima][more]
XP_023514649.12.0e-9588.04protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo][more]
XP_023004748.11.4e-9388.35protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Cucurbita maxima][more]
XP_022143586.15.6e-8277.99protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Momordica charantia][more]
BLAST of Carg05114 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G12850.14.0e-4251.65Far-red impaired responsive (FAR1) family protein[more]
AT2G43280.18.7e-3742.77Far-red impaired responsive (FAR1) family protein[more]
AT3G07500.18.7e-2939.46Far-red impaired responsive (FAR1) family protein[more]
AT3G59470.16.4e-2434.63Far-red impaired responsive (FAR1) family protein[more]
AT4G38180.19.0e-1846.46FAR1-related sequence 5[more]
BLAST of Carg05114 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZL8|FRS5_ARATH1.6e-1646.46Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=... [more]
sp|Q3E7I5|FRS12_ARATH3.7e-1341.18Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 S... [more]
sp|Q9M8J3|FRS7_ARATH4.6e-1140.63Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=... [more]
sp|Q9SWG3|FAR1_ARATH1.0e-1031.25Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1... [more]
sp|Q3EBQ3|FRS2_ARATH6.8e-0729.81Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=... [more]
BLAST of Carg05114 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K5G0|A0A0A0K5G0_CUCSA6.3e-8277.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375750 PE=3 SV=1[more]
tr|A0A1S3BS39|A0A1S3BS39_CUCME5.3e-8176.08protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103492594 PE=4 SV=... [more]
tr|A0A2N9HYE4|A0A2N9HYE4_FAGSY3.7e-6665.53Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45274 PE=4 SV=1[more]
tr|A0A061DUS5|A0A061DUS5_THECC2.0e-6467.49Far-red impaired responsive family protein isoform 2 OS=Theobroma cacao OX=3641 ... [more]
tr|A0A061DMU8|A0A061DMU8_THECC2.6e-6463.76Far-red impaired responsive family protein isoform 1 OS=Theobroma cacao OX=3641 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR031052FHY3/FAR1
IPR004330FAR1_DNA_bnd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05114-RACarg05114-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..179
NoneNo IPR availablePANTHERPTHR31669:SF80SUBFAMILY NOT NAMEDcoord: 44..215
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 72..152
e-value: 3.6E-22
score: 78.8
IPR031052FHY3/FAR1 familyPANTHERPTHR31669FAMILY NOT NAMEDcoord: 44..215