Cucsa.388460 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.388460
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Far-red impaired responsive (FAR1) family protein
Location	scaffold03967 : 859078 .. 864682 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTAATTAATAAGGACCCCGTGACTTATTTTTCTTCATTTCTTTTGTAGGTGATGATGGGAATTGGGATATACATTTACTAGTTGGTGGATCCACACATCTTCTACATCAAAAGTACAATTGGAGATTTTGGGAAAGGATTTCACCGCTGAAAATCACCCACAAGATCTTACACAAAATCAGGCCTACTTTTGCAGTTTCAACAACAGTTCAGTCTCACCCTCAAAAACCCAGTTCTTCAATCGATCCAATACCGTAATCATCCAAACAAAACAGTTCAACGAACTCACTGTTCGTCGGCAAGATTCTGAGTTATTTCATATTTTGATCGTTTCAATCAGCGAAAGGGAAGGGATTCAAGTGAAATCCCATTTAACCCGACTCCCGTTTTGAATCCAATTCCACTTCAAAACTCAAGTCTTTGCTCAGTTCAGTAGAACGTCATCAATCTTCTTCATTTTTATCTTTGATTTGGATGTAAAGCGCTCTCGAAGGATTAGGACGCTCTATTCAGTGAGTTCTCGTAAATTCTGTTTGTGGGGTTTCGTTTCATCATTTATTTGTTTAGACATTTGGTTTGTTTTACATTCTCTGTTTCTTCGCTGCTTAGATTCTGTAACGTTTGCAATTTTTTtAATGCCCTAATCTTGCTACTAATTGAATTTTGCCACATGTAGTTCTCTTGGGGTAGATTAAAGAGTAGGGAAGATTCTTCAAAATTAGGCTGCATTTTTCATTATTCTACATTGCCGATTTATAGTGTTATCTGGTTGGAGAGTAATTCTATACTCGAATTATTTTCCTCTTAATTTAATTGAAATTATGGCAACTCGATTGATTGATGCAATTCTGTTTGTTTTtCTTTTCCTGCTGTTTGAATGAATGAAGTTACCTGTCATCCAGTCTTCAGATACAGCAGTGTGAATTTTAACTCCATCTTTTTGTTCTCGTTTGTTCCCCTAAGATTAGGATTAGTATGATTTACCGTTTGGGTAGACTTTTTTGTGCTTAATATTGCGAGTTGATGAGATCAAATATGATCAATATCTTGCGATGGGAAGTTTTATCAAGAAGGCTTCTTTGTGATTAGGCTTAATCATGGGATAAGATAGAAGAGTCAACTTGTTTTTAAGCAGTTACTTTGAATAATGTTCATTTGCTTAGGTGATCCGTATGTGGGTATGGATAATGAATAATGAACAATGAATAATGTTCATGTCTATTTTTGTGATTATGTTAATTTTCCCAAGGGTTTCTGTTTCTTTTtCCTTTCTTTGTTTTGGATTTTCATTTCCTTTGGTAGATTATACATTATGCTTTAGGCTTATGTCTCCATATGGAAGCTGTTATTGGAAAAAATATATATTTTGCAATCTGTAAGAGGCTTCACAATTCACATGCTCTCAAATATGAAATAATTTCTTAACGGGTTTCCCCTTTCTTTGAGTGGGAACTAGCCTTTCATCAATTAATGAAAAGATTGAAAGAAGAGGGTGAAATATTCACAATGTAATTTTGTAAGTACTACAATTTGCATAGATTAATTGAGAATCATAATTAAGAAAGAAATTCAAGAGTGTACTATTCATAATATCATTTCTTATATGCTTAACTCATTTTCTCTGTTAGTAATGTTGGTGAATATATGCTGCAGTGAATTTAGACGATGGATCAGGGCCAGCACACAACTCTATTGAGGTTAACACACATGCAGCCGATGGAAATTTAGTATTGGAGCCATATGTGGGTATGGAGTTTGATTCTGAAGATGCTGCCAGAAGATTTTATGCCGAATATGCCAGACAAATGGGGTTTGTTGTACGAATCATGCAGCGACGTCGTTCAGGAATTGATGGAAGAACTCTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCCAATCATAGAGGAATTTACGGATTGGATAAAAAATCACGGCCTAGTGCACGAGAGGGCTGCAAGGCAACAATTTTAGTAAAAATGGAGAAATCTGGAAAATGGGTTGTTACACGATTTGTGAAGGATCACAATCATCCCTTAGTTGTTTGTTCCAATGGTTTCAACAGTTCGGTGAGATATTCTGATTCTCTATTTTATTCTCTTCTTCCCTTACTACTGTCAGGACAAGAACAATAAAAAaTAAGAAACTAAAATTTTGATTTTGTTTGTCCTGTTTTTTATGAATATAACTATTAATGTGACAAGGTAACACTACAAAGTAATAAATAAATATATTTGAATAATTAAATAAAGTCCGTAAAAGAATATTGCATAGCCATTGTCAAAGCTGTTGATTTCTTCTGCACAAGTGTAAACAAGCAATTCAACACGGTGTGGGTGAGGTCAACCATTAATATCAATGGGCTCCGAGTGTTTCCTGTGAAAGATGATAGTTATATAGTACATCTTAAAACTCTCTTCCATTTGTCACTAATTACTTGTTCTGTTGTATAATCCAAGAACCACCTAGGGTTTCCTTTCCAAAAAAGATATGGAACTTTTCATGAAGGTAAGGAAAAGAGACTAATCCTGAAGTATACAAGGAGAAACAAAAAGAACTAGAACAGGGAGCTAAAGCAAATAAGCATAAGCAACAACAAAGAGACATAAAGCAATCTAACAAGAAACAAAAATATAATACTTAAGAGTGTCCTAGAAAAGAAGTCCAACAGCTATCAATGTCTTGAATTGTAAACCCTTCAAAAAATTTGGAGAGGTAGCACCAATAGACGGCCTTTAAGCGGGTGGAATCAAATCGAGCAATAAGAATTTAGGAATCATTTTGGAACATGCGTTGATTTCTTATGAAGCATAATGAGCAAGTGGGAGCTCTCAAATCTTCCCATAGATATATTTCCCTGTATTTCCTATTTGTAAAAGTAACATTCTTCATTTTGTTATGAGACACTAGAGAGTCATAGCTAGTAAAGCAGCAGAAACTAGATTGGATACTGTTGTGACTTGTGGAGAAAATCATTCAGGTGTGGAGTTTGACGCTTGGAGTTCAAACTTCTAAGTGGTTAAGAAACAGTTGTTGAACTTAGAGAAGAGATGCCTATATCTCTAGGAAAAGGGATGGAGCCATTGTTTCTGTTAAGAAGGATGGAATGTGGTCACTTAGGGAAAAAGTATTGCAAGAAGAGAGCTAGTAGAGGAAGAAGGTAATTTGTTGGTGTGTGTGGCAACATTGAACCAGATAGAAGGCCGAACAAATATTGGATGGTCTGACATAGTTAATGGACAGTTAATCGTGTTTTTtATTTGCATTTGAGGAAATTGGGCATTGATTTGTGATGAAGTTGGTCTAGATTGATAGCTGCAAGTGGAGAGATAGTGGTGAAAGAATGAGAGAAGTTGGAAGGTGTGATGCTATCTTTGGGTGGGGGAGGTATTTTCATGGAATTAATGAACTATAGGGAGGAGATCAGTTGTTAGAGGGGAAATAAGATATATTGTGTAAGATTTGCTCCCCCTTGCGAGTGGAGACTATTGTAAAGTAGTATTGCCATCATTTTAGGAGTATACTTTGCCAGTATTGGAGATTCTAGTTTTAGAATTTATTTTGGTGACTCAACTTGTCAACAATCTTAAGGTAGAGTTTAAGGCCAAATCATGGGTGTCTACGTAGCCTCATGTCTAGAAAGAATACATAAAACTCCTTTGGTATCAGCACCTTTTGGCGTATTTTGAGTCCTTCTCTGCTGCACCCTCAAGGTGGTCTTGAATGTGAGTGATGGCTGTTGTTTTGGCAGTGCAGAAATAGTGTCCATATTTATTGGGACAGATGTTTATGGTGCATACTCATCAAAATGGTGCAAAAGTTTTGTTGGAACAACAAGTGGTAGAATGCGAACACCAACAAATAGATCAGTAAATCAATATGCTTTGATTTTGACGTATTCAAAGTTTCAAACCTAACTGAGGTCAGTTTTCTGAGTGTTGTAGGAGGTTTGAAACAGCATCAATTGCAGACATTGCATGCATAAAGAACTAGAATGGACTATAATCTCTATTTGCAGAAAGAAAGAACTCCAGGTCGGTCAATGCATCGAGAGGAGTTATACTACCGAAATTGTTTCTTCCTACTGATTCTTCTATGATCCACTTACCTCTACTGTGACTGGGGTCATGGGCAAGTCTTAAAGAAGCACAGATGTTTAGCTTAGGAAGTCGATTAGAAATATATGAAGGCCATGGTATGATCATGTATACAAGTAAATATCTTGTTAGCCAGAAAGCTCGATATTTTGTTTTGACACTTGTGGGACTTCCCCTGCCCATCCCTGATAACATCTAGGACGTTGTAGTGAATTGTTTGTTTCTATTTTGGTTATGCGTGTGAATTGTGAACTAAGTCCCTAGTTTGCATGCCTTTTCTGTGCTACTAAGCGTTGGACAAGAACGTATGGCGTCGCCTGAATGTACTTCCATCGACTCTTTTTTtCATGTTTGCGAATTCAGGAAACAATTCAGATAGGCCATTTGTCATAGTTTTCTAGCTATCCCACTACAAAGAAACTTACTTTAGATATGGTTTTTGTGAGTTCAACTTGTTGAGGTCATAAAAACTGACCCATTTGTCCGATCTAATTGCAGCCTAGGTTACGACATTCACGTTTGCTCGTGATTCGTGAATATCTTTATCTTTCTTCTTTATGTGTACCATTTCGTGGCCAAAGATAAAGGACCAGAGATGAGATGGTTTCGAAGTATCAAATGTGCGAATATGCAGAGCAGAGTAGAGATTGGATAAAATTCGAAATTTCTAATATAGTGATGGGAGTTTTGTTTTGTTAATGAAGGATTGTAGCTGATTTGATAAAATATTACATAATAAATGAAAAACTGATTAAGGAGAATCACACTATGTGGACCTTTTTGTAAATGCTATTTTAGATTCGGAATCATCGTGAAGGTTCTTGCAAACTCATCGTGCTCCTTATGAATAGATCGTAGGTAGGAAACACAATAGTCGCTAACAATAAAAGATAGATGAGGAGATAAGTTTATGATATAGGGAACTAAATTCTGTCACTGAGTCGTTAACTTTTGATGGAAGAAAAATGCAAATAATAGATCTATCTTGATTCTTTTGTCCCATTTGATGCTGATCTGGTGTTTGCAAAATGCGAAATATGAACTGTGACAATATAATTATAGTTGTATCAAATTGAAACTACTTCCTTAATCTCTCATGTGGAATTTAATCGACATGGATCAATATTTTCAGGGCGACAAAGATAAGAAAATCGAGGAACTGAAAATGGAGTTGGAGCATCAGGAGCAACTATGCATTGCTTATAGGGAAAAGCTATTCAATTTTATATCAAATGTGGAGGAACAAACAGAAGAATTATCTTCAAAAATACAAGTGATCATCGGCAATGTAAGGCAAGTCGAATCTGGAATGCAAAAACACTATCAATGTCGACAATAGTAAATAAATAAATCTGAATATGTAGAGAGTTGAAAATTTGAGCCTCAATAATCTTTTCTACTACTTGATTTAGGAATGTACAGTAGCCATTGATGTATTGAACTGAAGATGAGAGAGTCTTGGACTCTTAAATGTAATACATGTCGTTGGAATATCTCCA

mRNA sequence

TCCATTAATTAATAAGGACCCCGTGACTTATTTTTCTTCATTTCTTTTGTAGGTGATGATGGGAATTGGGATATACATTTACTAGTTGGTGGATCCACACATCTTCTACATCAAAAGTACAATTGGAGATTTTGGGAAAGGATTTCACCGCTGAAAATCACCCACAAGATCTTACACAAAATCAGGCCTACTTTTGCAGTTTCAACAACAGTTCAGTCTCACCCTCAAAAACCCAGTTCTTCAATCGATCCAATACCGTAATCATCCAAACAAAACAGTTCAACGAACTCACTGTTCGTCGGCAAGATTCTGAGTTATTTCATATTTTGATCGTTTCAATCAGCGAAAGGGAAGGGATTCAAGTGAAATCCCATTTAACCCGACTCCCGTTTTGAATCCAATTCCACTTCAAAACTCAAGTCTTTGCTCAGTTCAGTAGAACGTCATCAATCTTCTTCATTTTTATCTTTGATTTGGATGTAAAGCGCTCTCGAAGGATTAGGACGCTCTATTCATGAATTTAGACGATGGATCAGGGCCAGCACACAACTCTATTGAGGTTAACACACATGCAGCCGATGGAAATTTAGTATTGGAGCCATATGTGGGTATGGAGTTTGATTCTGAAGATGCTGCCAGAAGATTTTATGCCGAATATGCCAGACAAATGGGGTTTGTTGTACGAATCATGCAGCGACGTCGTTCAGGAATTGATGGAAGAACTCTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCCAATCATAGAGGAATTTACGGATTGGATAAAAAATCACGGCCTAGTGCACGAGAGGGCTGCAAGGCAACAATTTTAGTAAAAATGGAGAAATCTGGAAAATGGGTTGTTACACGATTTGTGAAGGATCACAATCATCCCTTAGTTGTTTGTTCCAATGGTTTCAACAGTTCGGGCGACAAAGATAAGAAAATCGAGGAACTGAAAATGGAGTTGGAGCATCAGGAGCAACTATGCATTGCTTATAGGGAAAAGCTATTCAATTTTATATCAAATGTGGAGGAACAAACAGAAGAATTATCTTCAAAAATACAAGTGATCATCGGCAATGTAAGGCAAGTCGAATCTGGAATGCAAAAACACTATCAATGTCGACAATAGTAAATAAATAAATCTGAATATGTAGAGAGTTGAAAATTTGAGCCTCAATAATCTTTTCTACTACTTGATTTAGGAATGTACAGTAGCCATTGATGTATTGAACTGAAGATGAGAGAGTCTTGGACTCTTAAATGTAATACATGTCGTTGGAATATCTCCA

Coding sequence (CDS)

ATGAATTTAGACGATGGATCAGGGCCAGCACACAACTCTATTGAGGTTAACACACATGCAGCCGATGGAAATTTAGTATTGGAGCCATATGTGGGTATGGAGTTTGATTCTGAAGATGCTGCCAGAAGATTTTATGCCGAATATGCCAGACAAATGGGGTTTGTTGTACGAATCATGCAGCGACGTCGTTCAGGAATTGATGGAAGAACTCTAGCCCGGAGGCTTGGATGTAATAAACAAGGTTTCTCTCCCAATCATAGAGGAATTTACGGATTGGATAAAAAATCACGGCCTAGTGCACGAGAGGGCTGCAAGGCAACAATTTTAGTAAAAATGGAGAAATCTGGAAAATGGGTTGTTACACGATTTGTGAAGGATCACAATCATCCCTTAGTTGTTTGTTCCAATGGTTTCAACAGTTCGGGCGACAAAGATAAGAAAATCGAGGAACTGAAAATGGAGTTGGAGCATCAGGAGCAACTATGCATTGCTTATAGGGAAAAGCTATTCAATTTTATATCAAATGTGGAGGAACAAACAGAAGAATTATCTTCAAAAATACAAGTGATCATCGGCAATGTAAGGCAAGTCGAATCTGGAATGCAAAAACACTATCAATGTCGACAATAG

Protein sequence

MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVIIGNVRQVESGMQKHYQCRQ*

Homology

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BLAST of Cucsa.388460 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.1e-22
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 1


Query: 25  LVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGF-S 84
           L LEPY G+EF+SE+AA+ FY  YAR++GF  R+   RRS  DG  + R+  C K+GF +
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 85  PNHRGIYGLD-KKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 133
            N +     + K+ R   R GCKA++ VKM+ SGKW+V+ FVKDHNH LV
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178

HSP 2 Score: 39.7 bits (91), Expect = 4.8e-02
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 1


Query: 143 DKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVI 191
           + DKKI +L+ ELE   + C AYR  L + +  +E+Q  ++S K+Q I
Sbjct: 733 EMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780

[Close]

BLAST of Cucsa.388460 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-16
Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 1


Query: 22  DGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQG 81
           +G   +EPYVG+EFD+ + AR FY  YA + GF VR  Q  RS  DG   +RR  C+K+G
Sbjct: 36  EGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEG 95

Query: 82  FSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 132
           F  N              +R GC A I V+   +GKWV+ +  K+HNH L
Sbjct: 96  FQLN--------------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

HSP 2 Score: 80.9 bits (198), Expect = 1.9e-14
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 1


Query: 28  EPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHR 87
           EPY G+EF S + A +FY  YA  +GF VRI Q  RS +DG   +RR  C+++GF     
Sbjct: 210 EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF----- 269

Query: 88  GIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 132
                     PS R GC A + +K + SG W+V R  KDHNH L
Sbjct: 270 --------QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299

[Close]

BLAST of Cucsa.388460 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-16
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 1


Query: 22  DGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQG 81
           +G+  LEPYVG+EFD+ + AR +Y  YA + GF VR  Q  RS  DG   +RR  C+K+G
Sbjct: 21  EGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEG 80

Query: 82  FSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 132
           F  N              +R GC A I V+   +GKWV+ +  K+HNH L
Sbjct: 81  FQLN--------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116

HSP 2 Score: 82.8 bits (203), Expect = 4.9e-15
Identity = 46/104 (44.23%), Postives = 59/104 (56.73%), Query Frame = 1


Query: 28  EPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHR 87
           EPY G+EF+S + A +FY  YA  +GF VRI Q  RS +DG   +RR  C+K+GF     
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF----- 248

Query: 88  GIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 132
                     PS R GC A + +K + SG W+V R  KDHNH L
Sbjct: 249 --------QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278

[Close]

BLAST of Cucsa.388460 vs. Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.9e-15
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 1


Query: 23  GNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGF 82
           G+L LEP  G++FD+ +AA  FY EYA+ MGF   I   RRS      +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 83  SPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 133
           +P      G   +     +  CKA++ VK    GKW++  FVKDHNH L+
Sbjct: 105 TPESES-SGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

[Close]

BLAST of Cucsa.388460 vs. Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 7.8e-13
Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 1


Query: 12  NSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTL 71
           N+++ +    D   + EP VGMEF+SE  A+ FY EY+RQ+GF  +++ R     DG   
Sbjct: 32  NNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLPR----TDGSVS 91

Query: 72  ARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 131
            R   C+               K+S+    E C A + ++++   KWVVT+FVK+H H L
Sbjct: 92  VREFVCSSS------------SKRSKRRLSESCDAMVRIELQGHEKWVVTKFVKEHTHGL 135

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BLAST of Cucsa.388460 vs. TrEMBL
Match: A0A0A0K5G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-116
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ
Sbjct: 517 MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 576

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV
Sbjct: 577 RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 636

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT
Sbjct: 637 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 696

Query: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 210
           EELSSKIQVIIGNVRQVESGMQKHYQCRQ
Sbjct: 697 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 725

[Close]

BLAST of Cucsa.388460 vs. TrEMBL
Match: A0A061DMU8_THECC (Far-red impaired responsive family protein isoform 1 OS=Theobroma cacao GN=TCM_002653 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 7.2e-82
Identity = 153/203 (75.37%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           M+LD   G   +S E  T   +G  +LEPYVGMEF+SED AR+FY EYARQ+GFVVRIMQ
Sbjct: 71  MDLDKEVGTVDSS-EEKTAEPEGREILEPYVGMEFESEDDARKFYVEYARQVGFVVRIMQ 130

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNH+G +G DKK RPSAREGCKATILVKMEK+GKWVV
Sbjct: 131 RRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVV 190

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVK+HNHPL+  +NGF+++GDKDKKIEEL MEL HQEQLC AYREKLF F++NVEEQT
Sbjct: 191 TRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAYREKLFTFMNNVEEQT 250

Query: 181 EELSSKIQVIIGNVRQVESGMQK 204
           EELSSKIQVI+ NVR++ES  Q+
Sbjct: 251 EELSSKIQVIVDNVRKLESETQR 272

[Close]

BLAST of Cucsa.388460 vs. TrEMBL
Match: A0A061DUS5_THECC (Far-red impaired responsive family protein isoform 2 OS=Theobroma cacao GN=TCM_002653 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.1e-81
Identity = 152/203 (74.88%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           ++LD   G   +S E  T   +G  +LEPYVGMEF+SED AR+FY EYARQ+GFVVRIMQ
Sbjct: 10  VDLDKEVGTVDSS-EEKTAEPEGREILEPYVGMEFESEDDARKFYVEYARQVGFVVRIMQ 69

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNH+G +G DKK RPSAREGCKATILVKMEK+GKWVV
Sbjct: 70  RRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVV 129

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVK+HNHPL+  +NGF+++GDKDKKIEEL MEL HQEQLC AYREKLF F++NVEEQT
Sbjct: 130 TRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAYREKLFTFMNNVEEQT 189

Query: 181 EELSSKIQVIIGNVRQVESGMQK 204
           EELSSKIQVI+ NVR++ES  Q+
Sbjct: 190 EELSSKIQVIVDNVRKLESETQR 211

[Close]

BLAST of Cucsa.388460 vs. TrEMBL
Match: A0A0B0MT75_GOSAR (Far1-related sequence 5-like protein OS=Gossypium arboreum GN=F383_27616 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-81
Identity = 148/202 (73.27%), Postives = 176/202 (87.13%), Query Frame = 1


Query: 2   NLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQR 61
           +LD   G A +S+E  T   +G+ +LEPYVGMEF+SED A++FY EYAR++GFVVRIMQR
Sbjct: 13  DLDKEGGKADSSVEEKTAEPEGSEILEPYVGMEFESEDDAKKFYIEYARRIGFVVRIMQR 72

Query: 62  RRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVT 121
           RRSGIDGRTLARRLGCNKQGFSPNH+G  G +KK RPSAREGCKATILVKMEK+GKWVVT
Sbjct: 73  RRSGIDGRTLARRLGCNKQGFSPNHKGTLGQEKKPRPSAREGCKATILVKMEKTGKWVVT 132

Query: 122 RFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTE 181
           RF K+HNHPL++ +NGFN++GDKDKKIEEL MEL HQEQLC AYREKLF FI+NVE+QTE
Sbjct: 133 RFEKEHNHPLMITTNGFNTTGDKDKKIEELTMELAHQEQLCSAYREKLFAFINNVEKQTE 192

Query: 182 ELSSKIQVIIGNVRQVESGMQK 204
           ELSSKI+VI+ NVR++E+  Q+
Sbjct: 193 ELSSKIEVIVDNVRKLEAQRQR 214

[Close]

BLAST of Cucsa.388460 vs. TrEMBL
Match: A0A067LA34_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15097 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 154/203 (75.86%), Postives = 172/203 (84.73%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           M+LD   G    S+E    + +G+ VLEPYVGMEFDSEDAAR+FY EYAR++GFVVRIMQ
Sbjct: 1   MDLDKEVGAVDISVEEKNVSVEGDGVLEPYVGMEFDSEDAARKFYIEYARRIGFVVRIMQ 60

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSP HR   G DKK R SAREGCKATILVKMEKSGKWVV
Sbjct: 61  RRRSGIDGRTLARRLGCNKQGFSPKHRSTIGPDKKPRSSAREGCKATILVKMEKSGKWVV 120

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRF KDHNHPLVV +NGF+++GDKDKKIEEL  ELE QEQLC  YREKL +F++NVEEQT
Sbjct: 121 TRFEKDHNHPLVVTANGFSTAGDKDKKIEELTKELERQEQLCAVYREKLLSFMNNVEEQT 180

Query: 181 EELSSKIQVIIGNVRQVESGMQK 204
           EELSSKIQVI+ NVR+VES +QK
Sbjct: 181 EELSSKIQVIVDNVRKVESEVQK 203

[Close]

BLAST of Cucsa.388460 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 217.6 bits (553), Expect = 7.2e-57
Identity = 109/182 (59.89%), Postives = 145/182 (79.67%), Query Frame = 1


Query: 23  GNLVL-EPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQG 82
           G+L L EPYVG++F+SE+ A+ FY EY++++GFVVR+MQRRRSGIDGRTLARRLGCNKQG
Sbjct: 3   GDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG 62

Query: 83  FSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL-VVCSNGFNS 142
           F PN++        S  S+REGCKATILVKMEKSGKWVVTRF+K+HNH L  + S+ ++S
Sbjct: 63  FGPNNQ----RSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS 122

Query: 143 SGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVIIGNVRQVESG 202
             DK++KI+EL  E+E Q++LC  YR++L +FI NVE  TEELS K++ I+ NV+++E  
Sbjct: 123 FADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLECQ 180

[Close]

BLAST of Cucsa.388460 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-46
Identity = 86/176 (48.86%), Postives = 129/176 (73.30%), Query Frame = 1


Query: 24  NLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFS 83
           +  +EP  G+ F+SEDAA+ FY +Y+R++GFV+R+M  RRS  DGR LARR GCNK+G  
Sbjct: 17  DFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHC 76

Query: 84  PNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLVVC-SNGFNSSG 143
            + RG +G  +K RPS REGCKA I VK ++SGKWV+T+FVK+HNHPLVV      ++  
Sbjct: 77  VSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLD 136

Query: 144 DKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVIIGNVRQVE 199
           +KDK+I+EL +EL ++++LC AY+E+L  F   VEE + +++ K++ ++ N+++ E
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFE 192

[Close]

BLAST of Cucsa.388460 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 147.9 bits (372), Expect = 7.0e-36
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 1


Query: 12  NSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTL 71
           NS  + T   + + ++EP++GMEF+SE+AA+ FY  YA  MGFV+R+   RRS  DG  +
Sbjct: 16  NSDVMKTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVV 75

Query: 72  ARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 131
            RRL CNK+GF    R      +K R   REGCKA I+VK EKSG W+VT+F K+HNHPL
Sbjct: 76  WRRLVCNKEGFR-RSRPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPL 135

Query: 132 VVCSNGF-------NSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELS 191
           +  S           +  +KD KI EL  EL  + + C A +++L   +  +EE +  L+
Sbjct: 136 LPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLT 195

Query: 192 SKIQVIIGNVRQVES 200
             I  +I +VR +ES
Sbjct: 196 ININSVIQSVRDIES 209

[Close]

BLAST of Cucsa.388460 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-31
Identity = 77/189 (40.74%), Postives = 111/189 (58.73%), Query Frame = 1


Query: 28  EPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFS-PNH 87
           EPYVG EF+SE AA  FY  YA ++GFV+R+ +  RS  DG  + R+L CNK+G+  P+ 
Sbjct: 69  EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSK 128

Query: 88  RGIYGLDK--KSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLVV--CSNG--FNS 147
           R     DK  + R   R GCKA IL++ E SGKWV+T+FVK+HNH L+      G  ++ 
Sbjct: 129 R-----DKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLMPGRVRRGCIYDQ 188

Query: 148 SGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVIIGNVRQVESG 207
             ++  KI+EL  +L  +++    Y+  L      +E+  E LS +IQ I+ NVR +E  
Sbjct: 189 YPNEHDKIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLE-- 248

Query: 208 MQKHYQCRQ 210
            + H Q  Q
Sbjct: 249 QRDHQQNHQ 250

[Close]

BLAST of Cucsa.388460 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 1


Query: 25  LVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGF-S 84
           L LEPY G+EF+SE+AA+ FY  YAR++GF  R+   RRS  DG  + R+  C K+GF +
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 85  PNHRGIYGLD-KKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 133
            N +     + K+ R   R GCKA++ VKM+ SGKW+V+ FVKDHNH LV
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178

HSP 2 Score: 39.7 bits (91), Expect = 2.7e-03
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 1


Query: 143 DKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQTEELSSKIQVI 191
           + DKKI +L+ ELE   + C AYR  L + +  +E+Q  ++S K+Q I
Sbjct: 733 EMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780

[Close]

BLAST of Cucsa.388460 vs. NCBI nr
Match: gi|449462447|ref|XP_004148952.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.2e-116
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ
Sbjct: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV
Sbjct: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT
Sbjct: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180

Query: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 210
           EELSSKIQVIIGNVRQVESGMQKHYQCRQ
Sbjct: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 209

[Close]

BLAST of Cucsa.388460 vs. NCBI nr
Match: gi|700189500|gb|KGN44733.1| (hypothetical protein Csa_7G375750 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.2e-116
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ
Sbjct: 517 MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 576

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV
Sbjct: 577 RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 636

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT
Sbjct: 637 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 696

Query: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 210
           EELSSKIQVIIGNVRQVESGMQKHYQCRQ
Sbjct: 697 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 725

[Close]

BLAST of Cucsa.388460 vs. NCBI nr
Match: gi|659100746|ref|XP_008451247.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 204/209 (97.61%), Postives = 207/209 (99.04%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           MNLDDGSGPAHNS+EVNT AADGN+V EPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ
Sbjct: 1   MNLDDGSGPAHNSVEVNTDAADGNVVSEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSP+HRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV
Sbjct: 61  RRRSGIDGRTLARRLGCNKQGFSPSHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT
Sbjct: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180

Query: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 210
           EELSSKIQVIIGNVRQVESGMQKHYQCRQ
Sbjct: 181 EELSSKIQVIIGNVRQVESGMQKHYQCRQ 209

[Close]

BLAST of Cucsa.388460 vs. NCBI nr
Match: gi|590713165|ref|XP_007049565.1| (Far-red impaired responsive family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 311.6 bits (797), Expect = 1.0e-81
Identity = 153/203 (75.37%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           M+LD   G   +S E  T   +G  +LEPYVGMEF+SED AR+FY EYARQ+GFVVRIMQ
Sbjct: 71  MDLDKEVGTVDSS-EEKTAEPEGREILEPYVGMEFESEDDARKFYVEYARQVGFVVRIMQ 130

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNH+G +G DKK RPSAREGCKATILVKMEK+GKWVV
Sbjct: 131 RRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVV 190

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVK+HNHPL+  +NGF+++GDKDKKIEEL MEL HQEQLC AYREKLF F++NVEEQT
Sbjct: 191 TRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAYREKLFTFMNNVEEQT 250

Query: 181 EELSSKIQVIIGNVRQVESGMQK 204
           EELSSKIQVI+ NVR++ES  Q+
Sbjct: 251 EELSSKIQVIVDNVRKLESETQR 272

[Close]

BLAST of Cucsa.388460 vs. NCBI nr
Match: gi|590713168|ref|XP_007049566.1| (Far-red impaired responsive family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 310.1 bits (793), Expect = 3.0e-81
Identity = 152/203 (74.88%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 1   MNLDDGSGPAHNSIEVNTHAADGNLVLEPYVGMEFDSEDAARRFYAEYARQMGFVVRIMQ 60
           ++LD   G   +S E  T   +G  +LEPYVGMEF+SED AR+FY EYARQ+GFVVRIMQ
Sbjct: 10  VDLDKEVGTVDSS-EEKTAEPEGREILEPYVGMEFESEDDARKFYVEYARQVGFVVRIMQ 69

Query: 61  RRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVV 120
           RRRSGIDGRTLARRLGCNKQGFSPNH+G +G DKK RPSAREGCKATILVKMEK+GKWVV
Sbjct: 70  RRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVV 129

Query: 121 TRFVKDHNHPLVVCSNGFNSSGDKDKKIEELKMELEHQEQLCIAYREKLFNFISNVEEQT 180
           TRFVK+HNHPL+  +NGF+++GDKDKKIEEL MEL HQEQLC AYREKLF F++NVEEQT
Sbjct: 130 TRFVKEHNHPLIATANGFSTTGDKDKKIEELSMELAHQEQLCSAYREKLFTFMNNVEEQT 189

Query: 181 EELSSKIQVIIGNVRQVESGMQK 204
           EELSSKIQVI+ NVR++ES  Q+
Sbjct: 190 EELSSKIQVIVDNVRKLESETQR 211

The following BLAST results are available for this feature:

BLAST of Cucsa.388460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRS5_ARATH	4.1e-22	50.00	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	[more]
FRS12_ARATH	4.4e-16	41.82	Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1	[more]
FRS7_ARATH	4.4e-16	41.82	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1	[more]
FAR1_ARATH	4.9e-15	38.18	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1	[more]
FRS3_ARATH	7.8e-13	34.17	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2	[more]

BLAST of Cucsa.388460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5G0_CUCSA	1.5e-116	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1	[more]
A0A061DMU8_THECC	7.2e-82	75.37	Far-red impaired responsive family protein isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
A0A061DUS5_THECC	2.1e-81	74.88	Far-red impaired responsive family protein isoform 2 OS=Theobroma cacao GN=TCM_0...	[more]
A0A0B0MT75_GOSAR	6.1e-81	73.27	Far1-related sequence 5-like protein OS=Gossypium arboreum GN=F383_27616 PE=4 SV...	[more]
A0A067LA34_JATCU	1.0e-80	75.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15097 PE=4 SV=1	[more]

BLAST of Cucsa.388460 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12850.1	7.2e-57	59.89	Far-red impaired responsive (FAR1) family protein	[more]
AT2G43280.1	2.6e-46	48.86	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	7.0e-36	42.05	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	2.3e-31	40.74	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	2.3e-23	50.00	FAR1-related sequence 5	[more]

BLAST of Cucsa.388460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462447\|ref\|XP_004148952.1\|	2.2e-116	100.00	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus]	[more]
gi\|700189500\|gb\|KGN44733.1\|	2.2e-116	100.00	hypothetical protein Csa_7G375750 [Cucumis sativus]	[more]
gi\|659100746\|ref\|XP_008451247.1\|	1.3e-113	97.61	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]	[more]
gi\|590713165\|ref\|XP_007049565.1\|	1.0e-81	75.37	Far-red impaired responsive family protein isoform 1 [Theobroma cacao]	[more]
gi\|590713168\|ref\|XP_007049566.1\|	3.0e-81	74.88	Far-red impaired responsive family protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004330	FAR1_DNA_bnd_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.388460.1	Cucsa.388460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 43..132 score: 6.7
None	No IPR available	unknown	Coil	Coil	coord: 148..168 scor
None	No IPR available	PANTHER	PTHR31669:SF44	FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN	coord: 17..206 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.388460	ClCG09G007820	Watermelon (Charleston Gray)	cgywcgB667
Cucsa.388460	CSPI07G15540	Wild cucumber (PI 183967)	cgycpiB574
Cucsa.388460	CmaCh17G013450	Cucurbita maxima (Rimu)	cgycmaB1077
Cucsa.388460	CmaCh08G002910	Cucurbita maxima (Rimu)	cgycmaB1079
Cucsa.388460	CmoCh08G002880	Cucurbita moschata (Rifu)	cgycmoB1078
Cucsa.388460	CmoCh17G013080	Cucurbita moschata (Rifu)	cgycmoB1076
Cucsa.388460	Lsi02G022070	Bottle gourd (USVL1VR-Ls)	cgylsiB631
Cucsa.388460	Cp4.1LG12g10410	Cucurbita pepo (Zucchini)	cgycpeB1027
Cucsa.388460	Cp4.1LG17g06030	Cucurbita pepo (Zucchini)	cgycpeB1032
Cucsa.388460	MELO3C029191.2	Melon (DHL92) v3.6.1	cgymedB631
Cucsa.388460	Bhi09G000972	Wax gourd	cgywgoB778
Cucsa.388460	Carg11519	Silver-seed gourd	carcgyB0013
Cucsa.388460	Carg05114	Silver-seed gourd	carcgyB0104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.388460	Melon (DHL92) v3.5.1	cgymeB636
Cucsa.388460	Cucumber (Chinese Long) v2	cgycuB545
Cucsa.388460	Melon (DHL92) v3.5.1	cgymeB640
Cucsa.388460	Watermelon (97103) v1	cgywmB702
Cucsa.388460	Melon (DHL92) v3.6.1	cgymedB634
Cucsa.388460	Cucumber (Chinese Long) v3	cgycucB590
Cucsa.388460	Watermelon (97103) v2	cgywmbB670