Carg02146 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTATTCAAGCCTGGGTTTCCCAACACAAACTCACCAGCATTGGTAACTCTTCAATACCATCTTTAGCCTTATTCTAGATCCCAAAATACTCCTTTTCATTCAATCCCTCTCTGTTTTTTTCTTACAGGAGCACTGTGGGCATCTGGGATCGGAGCATCCCTCGCCTATACCCGATCAACAACTCCCCTCAAGCCAAGCCTCCGACTAATCCACGCTAGGTAACATCCCCTCCAAATCCTCTCCTTTCTTTAAAAAGAAAAAACGTGTAATCGGAATCTTTGTTTTGTAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAACAAATCCGCCGGCGTCCGATCTGAAGCTCCAACGTCCGCCGTCGTACCGGGAGGACAATGAAGTGGATAAGCCGAGACTGGATTTCCAAGGGATGAATCATTTATTGTAAATTAAATGAAGAATATTAGATTCCATCCTTTTAAATAACGTGGATTACAGAGTATGAATTAAAATCTGAAAGGTTTTATAATTTATTGTTAGAACTCGGACATATATAATAATAATAATAATAAGAATCATATCCATAAATTAAAATCACATAACTAACTATGTATTTTTTTTAATCCCTTATTGCTTTAATTAAAAGAGAAAGTTACTTACATTATTTATTTTCATATAATAATGTTAATAAACCATAAATAATATAAAAAAAAAGTTAAGAAAATAAAATAATTAAAAAAAAAAAAAAAAAAAGAGGAAAAGACGTGTTTGCCTCAAAGGTATTGGCTGTGGTGAGGTTGGAAAGTCCTTTTCCATTTCCAACCCTTTTGTTTATTCCGCTTCTTTAAAGCACACTCAATCACCCAACAAGTTTGAAGGGCAGGATGGTCATTTCACTTCAATTAAAAATTTAAAAAACATATGGAACCCAATTAAGTCAATCATTAAATTAGATTCTTCTTTATAATTACAGGATAAACCAACAAACATTATTCAATAATTATTTAACAAACTCAATTTCCATTTGTTCAACAATTTATTTATTTTTATGCCTTTAAGTTGAGAGCACCAACTGAATAAAAATAAATAAATAAATAAAAAATGAGAGAGATAGACAACCACCTTGTTCCTGTTTCTTTAAACCCAAGACATTGGGTTTCAAATTCAACCCTCTTCTGGTTGCTGCTGATTTGGAAAATTCTCTCTGTAGAAGAAGGAGAAAAGAGGGAATATGGACTGCTCAATCTGCAGCTCCTTGCCGGTGATATTGCGGCCGCCGCGGAATACCATTTGTGGGTCGTGCTACGACGGAGCTAAGTGTCTGATCAATCTCATAAACAAGCTTCAATCTGATAAACCAGCGAATAAAGCGACCATTAATGTTGCCTCCTGCAAGGCAAGTTCTTCCCTTCTCAATTTTTTTCTTTGTTTCTAAATTGAGTTCATCACAAGTATGATATATATGGGCTTTTCTTTAAGGCCCAGTTTTTGTTAAATGGGCCGATGTTGTTTCATTTTAATAGAGAAATTAATTTTTAAAATATTAAATATCTCACGAATTTAAAAAATAAAATAATTGGAATTCAAAAATTAATAATAATGGTTTTCATTTACGTTTGTTTGATCTTCTTCTGCAGACGCTCATGAATGCTTCAAAATGGATAATAGATTTGAAGAACAGAGAAGAAGAATTAGAAGAAAAAATCGTTTACCTCGGCGAGTTTTCGGCTGCTTTTCGCCACCGGATTCACACCGATATTGAACTCAAATCCGGCTTCGCCGCGTCCCGTTCCGTTTCCGCTCACAGAGCCCTACTGGTAATTGAATCCTCTTATCCATCAATCCGATCCAAATTCTTAATAATCGCTAAGAAATCGCTACAATTACAGGCGACAAGATCAGAAATCTTCAAAAACTTACTCGAATCGGACGGTTGCAAGGCGGCTCCAATAGAAGCCATTACGCTGCCGGAGTTAAGCCACGAGGAGGTGGAATCGCTCCTCGAGTTCCTCTACGGTGGCGATTTGGCGGAAGAAAAACTGGAGAAACACGTTTATTCATTGGCTCTAGCCGCCGATAAATACGATATTCCATATTTGCAGAAGTTTTGCGAGCGGTACATGTTTAGATCGATGAACTGCGACAACGCTCTGGATGTGCTGGAAATTGCAGAAGTTTGCTCGTGCAGAGCGTTGAAGGAAAGCGCCTTGGATTTCATTGTTAGAAACATGGACGAAATCGTGTTCTCCTCTGGATTTGAGGCCTTCGCCCTCAAGAATCCCCATCTTTCCGTCCAGGTTACAAGAGCTTCATTAATGGACGCCAAGAAAAACAGACCCAATTCCGCTTGA ATGGAAGCTATTCAAGCCTGGGTTTCCCAACACAAACTCACCAGCATTGGAGCACTGTGGGCATCTGGGATCGGAGCATCCCTCGCCTATACCCGATCAACAACTCCCCTCAAGCCAAGCCTCCGACTAATCCACGCTAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAACAAATCCGCCGGCGTCCGATCTGAAGCTCCAACGTCCGCCGTCAAGAAGGAGAAAAGAGGGAATATGGACTGCTCAATCTGCAGCTCCTTGCCGGTGATATTGCGGCCGCCGCGGAATACCATTTGTGGGTCGTGCTACGACGGAGCTAAGTGTCTGATCAATCTCATAAACAAGCTTCAATCTGATAAACCAGCGAATAAAGCGACCATTAATACGCTCATGAATGCTTCAAAATGGATAATAGATTTGAAGAACAGAGAAGAAGAATTAGAAGAAAAAATCGTTTACCTCGGCGAGTTTTCGGCTGCTTTTCGCCACCGGATTCACACCGATATTGAACTCAAATCCGGCTTCGCCGCGTCCCGTTCCGTTTCCGCTCACAGAGCCCTACTGGTAATTGAATCCTCTTATCCATCAATCCGATCCAAATTCTTAATAATCGCTAAGAAATCGCTACAATTACAGGCGACAAGATCAGAAATCTTCAAAAACTTACTCGAATCGGACGGTTGCAAGGCGGCTCCAATAGAAGCCATTACGCTGCCGGAGTTAAGCCACGAGGAGGTGGAATCGCTCCTCGAGTTCCTCTACGGTGGCGATTTGGCGGAAGAAAAACTGGAGAAACACGTTTATTCATTGGCTCTAGCCGCCGATAAATACGATATTCCATATTTGCAGAAGTTTTGCGAGCGGTACATGTTTAGATCGATGAACTGCGACAACGCTCTGGATGTGCTGGAAATTGCAGAAGTTTGCTCGTGCAGAGCGTTGAAGGAAAGCGCCTTGGATTTCATTGTTAGAAACATGGACGAAATCGTGTTCTCCTCTGGATTTGAGGCCTTCGCCCTCAAGAATCCCCATCTTTCCGTCCAGGTTACAAGAGCTTCATTAATGGACGCCAAGAAAAACAGACCCAATTCCGCTTGA ATGGAAGCTATTCAAGCCTGGGTTTCCCAACACAAACTCACCAGCATTGGAGCACTGTGGGCATCTGGGATCGGAGCATCCCTCGCCTATACCCGATCAACAACTCCCCTCAAGCCAAGCCTCCGACTAATCCACGCTAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAACAAATCCGCCGGCGTCCGATCTGAAGCTCCAACGTCCGCCGTCAAGAAGGAGAAAAGAGGGAATATGGACTGCTCAATCTGCAGCTCCTTGCCGGTGATATTGCGGCCGCCGCGGAATACCATTTGTGGGTCGTGCTACGACGGAGCTAAGTGTCTGATCAATCTCATAAACAAGCTTCAATCTGATAAACCAGCGAATAAAGCGACCATTAATACGCTCATGAATGCTTCAAAATGGATAATAGATTTGAAGAACAGAGAAGAAGAATTAGAAGAAAAAATCGTTTACCTCGGCGAGTTTTCGGCTGCTTTTCGCCACCGGATTCACACCGATATTGAACTCAAATCCGGCTTCGCCGCGTCCCGTTCCGTTTCCGCTCACAGAGCCCTACTGGTAATTGAATCCTCTTATCCATCAATCCGATCCAAATTCTTAATAATCGCTAAGAAATCGCTACAATTACAGGCGACAAGATCAGAAATCTTCAAAAACTTACTCGAATCGGACGGTTGCAAGGCGGCTCCAATAGAAGCCATTACGCTGCCGGAGTTAAGCCACGAGGAGGTGGAATCGCTCCTCGAGTTCCTCTACGGTGGCGATTTGGCGGAAGAAAAACTGGAGAAACACGTTTATTCATTGGCTCTAGCCGCCGATAAATACGATATTCCATATTTGCAGAAGTTTTGCGAGCGGTACATGTTTAGATCGATGAACTGCGACAACGCTCTGGATGTGCTGGAAATTGCAGAAGTTTGCTCGTGCAGAGCGTTGAAGGAAAGCGCCTTGGATTTCATTGTTAGAAACATGGACGAAATCGTGTTCTCCTCTGGATTTGAGGCCTTCGCCCTCAAGAATCCCCATCTTTCCGTCCAGGTTACAAGAGCTTCATTAATGGACGCCAAGAAAAACAGACCCAATTCCGCTTGA MEAIQAWVSQHKLTSIGALWASGIGASLAYTRSTTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENKSAGVRSEAPTSAVKKEKRGNMDCSICSSLPVILRPPRNTICGSCYDGAKCLINLINKLQSDKPANKATINTLMNASKWIIDLKNREEELEEKIVYLGEFSAAFRHRIHTDIELKSGFAASRSVSAHRALLVIESSYPSIRSKFLIIAKKSLQLQATRSEIFKNLLESDGCKAAPIEAITLPELSHEEVESLLEFLYGGDLAEEKLEKHVYSLALAADKYDIPYLQKFCERYMFRSMNCDNALDVLEIAEVCSCRALKESALDFIVRNMDEIVFSSGFEAFALKNPHLSVQVTRASLMDAKKNRPNSA
BLAST of Carg02146 vs. NCBI nr
Match: XP_022939233.1 (BTB/POZ domain-containing protein At3g56230 [Cucurbita moschata]) HSP 1 Score: 497.3 bits (1279), Expect = 4.7e-137 Identity = 260/293 (88.74%), Postives = 261/293 (89.08%), Query Frame = 0
BLAST of Carg02146 vs. NCBI nr
Match: XP_023549749.1 (BTB/POZ domain-containing protein At3g56230 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135 Identity = 258/293 (88.05%), Postives = 261/293 (89.08%), Query Frame = 0
BLAST of Carg02146 vs. NCBI nr
Match: XP_022993732.1 (BTB/POZ domain-containing protein At3g56230 [Cucurbita maxima]) HSP 1 Score: 487.3 bits (1253), Expect = 4.8e-134 Identity = 255/293 (87.03%), Postives = 260/293 (88.74%), Query Frame = 0
BLAST of Carg02146 vs. NCBI nr
Match: XP_023549750.1 (BTB/POZ domain-containing protein At3g56230 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132 Identity = 256/306 (83.66%), Postives = 259/306 (84.64%), Query Frame = 0
BLAST of Carg02146 vs. NCBI nr
Match: XP_011656427.1 (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis sativus]) HSP 1 Score: 412.9 bits (1060), Expect = 1.2e-111 Identity = 214/298 (71.81%), Postives = 243/298 (81.54%), Query Frame = 0
BLAST of Carg02146 vs. TAIR10
Match: AT3G56230.1 (BTB/POZ domain-containing protein) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-67 Identity = 137/305 (44.92%), Postives = 194/305 (63.61%), Query Frame = 0
BLAST of Carg02146 vs. TAIR10
Match: AT1G01640.1 (BTB/POZ domain-containing protein) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37 Identity = 87/214 (40.65%), Postives = 130/214 (60.75%), Query Frame = 0
BLAST of Carg02146 vs. TAIR10
Match: AT2G40450.1 (BTB/POZ domain-containing protein) HSP 1 Score: 119.0 bits (297), Expect = 6.2e-27 Identity = 72/217 (33.18%), Postives = 114/217 (52.53%), Query Frame = 0
BLAST of Carg02146 vs. TAIR10
Match: AT5G48510.1 (BTB/POZ domain-containing protein) HSP 1 Score: 102.1 bits (253), Expect = 7.9e-22 Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Carg02146 vs. TAIR10
Match: AT2G05330.1 (BTB/POZ domain-containing protein) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 57/155 (36.77%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of Carg02146 vs. Swiss-Prot
Match: sp|Q9LYL9|Y3623_ARATH (BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana OX=3702 GN=At3g56230 PE=2 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 3.8e-66 Identity = 137/305 (44.92%), Postives = 194/305 (63.61%), Query Frame = 0
BLAST of Carg02146 vs. Swiss-Prot
Match: sp|Q9LQ95|Y1164_ARATH (BTB/POZ domain-containing protein At1g01640 OS=Arabidopsis thaliana OX=3702 GN=At1g01640 PE=1 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36 Identity = 87/214 (40.65%), Postives = 130/214 (60.75%), Query Frame = 0
BLAST of Carg02146 vs. Swiss-Prot
Match: sp|O22890|Y2045_ARATH (Putative BTB/POZ domain-containing protein At2g40450 OS=Arabidopsis thaliana OX=3702 GN=At2g40450 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-25 Identity = 72/217 (33.18%), Postives = 114/217 (52.53%), Query Frame = 0
BLAST of Carg02146 vs. Swiss-Prot
Match: sp|Q9LV63|Y5851_ARATH (BTB/POZ domain-containing protein At5g48510 OS=Arabidopsis thaliana OX=3702 GN=At5g48510 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20 Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Carg02146 vs. Swiss-Prot
Match: sp|O22891|Y2044_ARATH (Putative BTB/POZ domain-containing protein At2g40440 OS=Arabidopsis thaliana OX=3702 GN=At2g40440 PE=3 SV=2) HSP 1 Score: 100.9 bits (250), Expect = 3.2e-20 Identity = 61/172 (35.47%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of Carg02146 vs. TrEMBL
Match: tr|A0A1S3C429|A0A1S3C429_CUCME (BTB/POZ domain-containing protein At3g56230 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496602 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 1.0e-111 Identity = 214/296 (72.30%), Postives = 241/296 (81.42%), Query Frame = 0
BLAST of Carg02146 vs. TrEMBL
Match: tr|A0A1S4E1W6|A0A1S4E1W6_CUCME (BTB/POZ domain-containing protein At3g56230 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496602 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 9.3e-110 Identity = 213/307 (69.38%), Postives = 239/307 (77.85%), Query Frame = 0
BLAST of Carg02146 vs. TrEMBL
Match: tr|A0A0A0KAF8|A0A0A0KAF8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G013910 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.1e-89 Identity = 173/240 (72.08%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of Carg02146 vs. TrEMBL
Match: tr|A0A251QLP7|A0A251QLP7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G260000 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 7.4e-83 Identity = 166/285 (58.25%), Postives = 205/285 (71.93%), Query Frame = 0
BLAST of Carg02146 vs. TrEMBL
Match: tr|A0A2P6SLM2|A0A2P6SLM2_ROSCH (Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0371521 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.2e-82 Identity = 160/284 (56.34%), Postives = 209/284 (73.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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