Cla006619 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006619
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	POZ domain protein (AHRD V1 ***- Q2L3T3_WHEAT); contains Interpro domain(s) IPR013089 Kelch related
Location	Chr11 : 2143272 .. 2144638 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGACGGTGTCAATTCAAGGACTCACAACCTACAAGTATTATTCCGGAGACTTCAAAGTTTGGATAAATAATAATCCGTTTGCTAGGAAATTTAAAAGTAGAAATTTAAAAATAAGGGATTCAATTGAAAAAGAGTTGTATTTTATATTTTTAGAGATGTGTTTCATATTAATTTTAGAAATTAGATTCTATTTTAAATAATTGTTTAAAATGTATTTCATAATATATATATATATATATATCATAGAACTAGTTGTAGTTACATACTAATTTTTTTTTATCAAAGCTTAGAAATTATATATATAAAGCTTAGAAACTATTAGACACTTTTTAATACACGTAGAAATATGTATTTTTTTTTTCTTCTTTTGAATAATAGGGAAAATTTATTTTGGATGTTTTAAAAAGAAAAAAACATTTAAAATAATTACAAATATAGCAAAATTTTATTTTATAGATCGCGATAGATTTAGGTAAACCTCTATCATTTTAACAAATAAACTCCTATCACAAGTTAAAAATAAAATTTTATCAGAATATTTTAAATAAAAATGAGTCGTTAAAAGATATATTTTTTTTCTTTTAAATCAATCAAAGCAGACCGTTAGACTAAAGTGTTAATCTATCTCCTTCCACAGGCGCTCACAAATGCTTCAAAATGGATAATAGACTTAAAAAAGAGAGAAGAAGAATTAGAAGAAAAAATCGATTTCCTCGGCGAGTTCGCGGCGGCTTTCCGCCACCGGATTCACACCGATATTCAACTCAAACCCGGCTCCGCCGCATCCCCTTCGGTTTCCGCTCACAGAGCCTTACTGGTAATAGAATCCCCTTTCTCCAATTTCAATGTCCATCCAATCCAAATTCGACATGATCGGTAAGAATTTTCCCTCGATTATAGGCCACAAGATCGGAAATCTTCAAAAACCTACTGGAATCAGACGGGTGCAAGACCGCTCCAATGGACGCGATCACGTTATCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCCTGTACAGCGGCGATTTGGCAGAAGAGAAAGTGAAGAAGCACGTGTACTCATTGGCTATGGCGGGTGATAAATACGCGATTCCATACTTGCAGAAGTTTTGCGAGAGGTACATGTTGAAATCACTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAATTTGTTCGTGCAGAGTGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACCTGGAGGAGATTGTGTTTTCCTCTGGATTTGAGGCATTTGCCCTCAAGAATCCTCATCTTTCTGTCCAGATTACTAGAGCTTCTTTAATGAATGCCAGAGAAAACAAACCTAATTCTGCTTGA

mRNA sequence

ATGTTGGACGGTGTCAATTCAAGGACTCACAACCTACAAGCGCTCACAAATGCTTCAAAATGGATAATAGACTTAAAAAAGAGAGAAGAAGAATTAGAAGAAAAAATCGATTTCCTCGGCGAGTTCGCGGCGGCTTTCCGCCACCGGATTCACACCGATATTCAACTCAAACCCGGCTCCGCCGCATCCCCTTCGGTTTCCGCTCACAGAGCCTTACTGGCCACAAGATCGGAAATCTTCAAAAACCTACTGGAATCAGACGGGTGCAAGACCGCTCCAATGGACGCGATCACGTTATCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCCTGTACAGCGGCGATTTGGCAGAAGAGAAAGTGAAGAAGCACGTGTACTCATTGGCTATGGCGGGTGATAAATACGCGATTCCATACTTGCAGAAGTTTTGCGAGAGGTACATGTTGAAATCACTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAATTTGTTCGTGCAGAGTGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACCTGGAGGAGATTGTGTTTTCCTCTGGATTTGAGGCATTTGCCCTCAAGAATCCTCATCTTTCTGTCCAGATTACTAGAGCTTCTTTAATGAATGCCAGAGAAAACAAACCTAATTCTGCTTGA

Coding sequence (CDS)

ATGTTGGACGGTGTCAATTCAAGGACTCACAACCTACAAGCGCTCACAAATGCTTCAAAATGGATAATAGACTTAAAAAAGAGAGAAGAAGAATTAGAAGAAAAAATCGATTTCCTCGGCGAGTTCGCGGCGGCTTTCCGCCACCGGATTCACACCGATATTCAACTCAAACCCGGCTCCGCCGCATCCCCTTCGGTTTCCGCTCACAGAGCCTTACTGGCCACAAGATCGGAAATCTTCAAAAACCTACTGGAATCAGACGGGTGCAAGACCGCTCCAATGGACGCGATCACGTTATCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCCTGTACAGCGGCGATTTGGCAGAAGAGAAAGTGAAGAAGCACGTGTACTCATTGGCTATGGCGGGTGATAAATACGCGATTCCATACTTGCAGAAGTTTTGCGAGAGGTACATGTTGAAATCACTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAATTTGTTCGTGCAGAGTGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACCTGGAGGAGATTGTGTTTTCCTCTGGATTTGAGGCATTTGCCCTCAAGAATCCTCATCTTTCTGTCCAGATTACTAGAGCTTCTTTAATGAATGCCAGAGAAAACAAACCTAATTCTGCTTGA

Protein sequence

MLDGVNSRTHNLQALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRALLATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLAMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSSGFEAFALKNPHLSVQITRASLMNARENKPNSA

Homology

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BLAST of Cla006619 vs. Swiss-Prot
Match: Y3623_ARATH (BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana GN=At3g56230 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57
Identity = 108/210 (51.43%), Postives = 155/210 (73.81%), Query Frame = 1


Query: 13  QALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRAL 72
           Q L    KW+ ++K+ EEE +++I FL  F + F+ ++H DI LKPG    P + AHRAL
Sbjct: 72  QPLEKVIKWMKNMKETEEEQKKRIVFLSSFVSGFKEQLHADILLKPGDDGPP-IPAHRAL 131

Query: 73  LATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLA 132
           LA++SEIFKN+L+SDGCKTAP  AITL EL+ E+L++L+EFLY+G LA +K++K+VY+L 
Sbjct: 132 LASKSEIFKNILDSDGCKTAPEYAITLQELNSEQLQALLEFLYTGTLASDKLEKNVYALF 191

Query: 133 MAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVF 192
           +A DKY I YLQ+ CE+YML SL+  S L+VL+++++ S + LKE+ + F+VRN++++VF
Sbjct: 192 IAADKYMIHYLQELCEQYMLSSLDISSVLNVLDVSDLGSSKTLKEACVGFVVRNMDDVVF 251

Query: 193 SSGFEAFALKNPHLSVQITRASLMNARENK 223
           S  +E F+ KN HL V+ITRA LM  R  +
Sbjct: 252 SDKYEPFSQKNQHLCVEITRAFLMETRSKR 280

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BLAST of Cla006619 vs. Swiss-Prot
Match: Y1164_ARATH (BTB/POZ domain-containing protein At1g01640 OS=Arabidopsis thaliana GN=At1g01640 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.1e-42
Identity = 88/190 (46.32%), Postives = 130/190 (68.42%), Query Frame = 1


Query: 31  ELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRALLATRSEIFKNLLESDGCK 90
           E E+K  FLG    +F+ ++HTD+ +KPG  A P +  H+A+LA RS++F+N+L+SD CK
Sbjct: 3   EAEQKAAFLGGLVVSFKEQMHTDVLVKPGEEAPP-IPTHKAVLAARSKVFRNMLDSDECK 62

Query: 91  TAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVY-SLAMAGDKYAIPYLQKFCER 150
           T+P ++ITL +LSH+EL+SL+EFLYSG+L   K   + Y SL +A DKY I YLQ  C  
Sbjct: 63  TSPEESITLPDLSHDELKSLLEFLYSGNL---KAPYNQYRSLYLAADKYDISYLQDVCRN 122

Query: 151 YMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSSGFEAFALKNPHLSVQ 210
           + + SL+  + LD+LE+A I    +LK++A++ IV+++EE+V    +E F  +NP LSV+
Sbjct: 123 HFIASLSSRNVLDILELASIPCDTILKDAAINHIVKHMEEVVVPMKYETFVQRNPDLSVE 182

Query: 211 ITRASLMNAR 220
           ITRA L   +
Sbjct: 183 ITRAYLRETK 188

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BLAST of Cla006619 vs. Swiss-Prot
Match: Y2045_ARATH (Putative BTB/POZ domain-containing protein At2g40450 OS=Arabidopsis thaliana GN=At2g40450 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-30
Identity = 72/183 (39.34%), Postives = 107/183 (58.47%), Query Frame = 1


Query: 38  FLGEFAAAFRHRIHTDIQLKPG-SAASPSVSAHRALLATRSEIFKNLLESDGCKTAP--M 97
           FLG F      +   D++LK G S  + S+ AH+ +L  RSE+FK +LESD  K +   M
Sbjct: 10  FLGGFKKLLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQM 69

Query: 98  DAITLSELSHEELESLMEFLY--SGDLAEEKVKKHVYSLAMAGDKYAIPYLQKFCERYML 157
           + +TLSE+ HEELE+ +EF+Y   G +    +KKH  SL  A DKY IP+L+  C   ++
Sbjct: 70  ETVTLSEMKHEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELI 129

Query: 158 KSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSSGFEAFALKNPHLSVQITR 216
            SLN  +AL +LE+A+I   + L + A   I+ N+  I     F+ F   +P+L+V I +
Sbjct: 130 SSLNSSNALSILELAQIPFDKALNDPAFTTIITNISTIASGDEFKLFVANHPNLAVDIMK 189

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BLAST of Cla006619 vs. Swiss-Prot
Match: Y5851_ARATH (BTB/POZ domain-containing protein At5g48510 OS=Arabidopsis thaliana GN=At5g48510 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 71/186 (38.17%), Postives = 109/186 (58.60%), Query Frame = 1


Query: 35  KIDFLGEFAAAFRHRIHTDIQLKP-GSAASPSVSAHRALLATRSEIFKNLLESDGCKTAP 94
           K  F G  A     +   D+ LK   S    ++SAH+ +LA+RSE+FKN+ E D  KT+ 
Sbjct: 7   KEHFSGGLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTST 66

Query: 95  --MDAITLSELSHEELESLMEFLYS-GDLAEEKVKKHVYSLAMAGDKYAIPYLQKFCERY 154
             ++ ITLSE+ HEELE+ +EF+ S G +    VK+H  SL +A DKY I +L+  C   
Sbjct: 67  KHVETITLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLAADKYEILHLRDLCRTE 126

Query: 155 MLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSSGFEAFALKNPHLSVQI 214
           ++ SL+  ++LD+L +A+I   +VL + +  +I  N+  I  S  F+ F   NP+L+V+I
Sbjct: 127 LISSLSLLNSLDLLVLAQIPFDKVLNDESFSYIKNNISTIASSDEFKLFVAGNPNLAVEI 186

Query: 215 TRASLM 217
            + SL+
Sbjct: 187 MKVSLI 192

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BLAST of Cla006619 vs. Swiss-Prot
Match: Y2044_ARATH (Putative BTB/POZ domain-containing protein At2g40440 OS=Arabidopsis thaliana GN=At2g40440 PE=3 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26
Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 38  FLGEFAAAFRHRIHTDIQLKPGSAASP--SVSAHRALLATRSEIFKNLLESDGCK-TAPM 97
           F+G FA   + +   D++LK G +     S SAH+ +L+ RSE+FK +LESD  K +A +
Sbjct: 10  FVGGFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQL 69

Query: 98  DAITLSELSHEELESLMEFLYS-GDLAEEKVKKHVYSLAMAGDKYAIPYLQKFCERYMLK 157
           + ITL E+ HEELE+ +EF+YS G +   K K+HV SL +AGDKY IP+L+  C   ++ 
Sbjct: 70  ETITLCEMKHEELEAFIEFIYSDGSMLSAKEKQHVRSLYIAGDKYEIPHLRDLCRIELIS 129

Query: 158 SLNCGSALDVLEIAEICSCRVLKESALDF 183
           SL   +ALD+LE+A+I   + L +SA  F
Sbjct: 130 SLKSSNALDILELAQIPFDKALHDSAFFF 158

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BLAST of Cla006619 vs. TrEMBL
Match: A0A0A0KAF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013910 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98
Identity = 183/216 (84.72%), Postives = 200/216 (92.59%), Query Frame = 1


Query: 12  LQALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRA 71
           LQ LTNASKWIIDLK RE+ELE+KI+FL +F AAFRH+IHTDIQL PGS ASPS+SAHRA
Sbjct: 6   LQTLTNASKWIIDLKNREDELEDKINFLAQFTAAFRHQIHTDIQLNPGSPASPSISAHRA 65

Query: 72  LLATRSEIFKNLLESDGCKTAPMD-AITLSELSHEELESLMEFLYSGDLAEEKVKKHVYS 131
           LLATRSEIFKN+L+SDGCK AP +  ITL ELSHEELESLMEFLYSGDL EEKVKKHVYS
Sbjct: 66  LLATRSEIFKNILDSDGCKAAPTNSTITLPELSHEELESLMEFLYSGDLGEEKVKKHVYS 125

Query: 132 LAMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEI 191
           LA+AGDKY IPYLQKFCERYMLK LNC SALDVLE+AE+CSCR LKESALDFIVRN+EEI
Sbjct: 126 LALAGDKYEIPYLQKFCERYMLKWLNCESALDVLEVAEVCSCRALKESALDFIVRNMEEI 185

Query: 192 VFSSGFEAFALKNPHLSVQITRASLMNARENKPNSA 227
           VFSSGFEAFALKNPHLSVQITRASLM+AR+N+PNS+
Sbjct: 186 VFSSGFEAFALKNPHLSVQITRASLMDARKNRPNSS 221

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BLAST of Cla006619 vs. TrEMBL
Match: F6HC57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02290 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.8e-71
Identity = 136/220 (61.82%), Postives = 179/220 (81.36%), Query Frame = 1


Query: 3   DGVNSRTHNLQALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAA 62
           + + S  ++ +  +NA KW+ ++K+ EEEL EK+ FLG FAAAFR +IHTDI++KPG   
Sbjct: 49  NSIVSPANSSKGFSNALKWVKEMKEIEEELNEKLSFLGGFAAAFRDQIHTDIEVKPGHNG 108

Query: 63  SPSVSAHRALLATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEE 122
            PS+ AHRALLA RSEIFKN+L+SDGCK AP + ITL EL+HEEL+SL+EFLYSG L  +
Sbjct: 109 -PSLFAHRALLAARSEIFKNMLDSDGCKAAPSNTITLPELNHEELDSLLEFLYSGSLPAD 168

Query: 123 KVKKHVYSLAMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDF 182
           KV+KHVYSL++A DKY IP+LQKFCE+ ML SL+  SALDVLEI++ CS + +KE+AL++
Sbjct: 169 KVEKHVYSLSLAADKYEIPFLQKFCEQRMLGSLSSSSALDVLEISDACSSQTVKETALNY 228

Query: 183 IVRNLEEIVFSSGFEAFALKNPHLSVQITRASLMNARENK 223
           IV+N+E+IVFS+ +E+FALKNPHL VQITRAS M+A+  K
Sbjct: 229 IVKNMEDIVFSTRYESFALKNPHLCVQITRASFMDAKNRK 267

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BLAST of Cla006619 vs. TrEMBL
Match: M5X9Y7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016920mg PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.2e-71
Identity = 136/207 (65.70%), Postives = 164/207 (79.23%), Query Frame = 1


Query: 15  LTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRALLA 74
           L N SKW+ D K   EEL EKI FL  F  AFR +IHTDIQL PG    P + AHRALLA
Sbjct: 81  LENVSKWVHDRKDASEELNEKIKFLSGFVVAFRDQIHTDIQLHPGDNGPP-IPAHRALLA 140

Query: 75  TRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLAMA 134
            RSEIF N+L+SDGCK  P DA+TL EL+HEELESL+EFLY+GDL EEK+ KHVYSL +A
Sbjct: 141 IRSEIFNNMLDSDGCKAPPNDAVTLPELNHEELESLLEFLYNGDLHEEKMNKHVYSLFLA 200

Query: 135 GDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSS 194
            DKY I YLQK CER+ML+SL+  +ALDVLE+A++CSC  LK +ALDFIV+N+ +IVFS+
Sbjct: 201 ADKYGISYLQKLCERHMLESLSTANALDVLEVADLCSCLTLKNNALDFIVKNMHDIVFSA 260

Query: 195 GFEAFALKNPHLSVQITRASLMNAREN 222
            ++AFALKNPHL VQI+RASLM+A+ N
Sbjct: 261 KYDAFALKNPHLCVQISRASLMDAKRN 286

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BLAST of Cla006619 vs. TrEMBL
Match: A0A068V049_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039082001 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 131/208 (62.98%), Postives = 163/208 (78.37%), Query Frame = 1


Query: 15  LTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRALLA 74
           L NA KW+ ++K+ EEEL EK++FL  F AAFRH++H DI +KPG+   PS+ AHRALLA
Sbjct: 74  LANALKWVKEMKEAEEELNEKLNFLSGFVAAFRHQMHPDILIKPGNDG-PSLPAHRALLA 133

Query: 75  TRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLAMA 134
            RS++FKN+L+SDGCK  P D IT  EL+HEELESL+EFLY G+L +EK  KHVYSL+MA
Sbjct: 134 ARSDVFKNMLDSDGCKAPPSDTITFPELNHEELESLLEFLYGGELPKEKADKHVYSLSMA 193

Query: 135 GDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVFSS 194
            DKY IP+LQKFCE  ML SL+  + LDVLEIA+ CS   LKE+AL+FIV N+E++VFS 
Sbjct: 194 ADKYEIPFLQKFCEHRMLGSLSSSNVLDVLEIADTCSNPSLKETALNFIVNNMEDVVFSD 253

Query: 195 GFEAFALKNPHLSVQITRASLMNARENK 223
            F+AFALKNPHL+VQITRAS M  R  +
Sbjct: 254 RFDAFALKNPHLTVQITRASFMEIRNRR 280

[Close]

BLAST of Cla006619 vs. TrEMBL
Match: A0A0J8CZ30_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029750 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.9e-68
Identity = 131/218 (60.09%), Postives = 170/218 (77.98%), Query Frame = 1


Query: 5   VNSRTHNLQALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASP 64
           ++S   + +   N  KW+ ++K  EEE+ +K+ FLGEF  AFR  IHTDI +KPG+   P
Sbjct: 60  ISSSNPSCKGFANVLKWVKEMKDIEEEVNDKMSFLGEFEVAFRDEIHTDILVKPGNNGPP 119

Query: 65  SVSAHRALLATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKV 124
            + AHRALLA +SEIFKN+L+SDGCK AP +AITL EL+HEELESL+ FLY G L  +KV
Sbjct: 120 -IPAHRALLAAKSEIFKNMLDSDGCKEAPNEAITLPELNHEELESLLNFLYCGSLPIDKV 179

Query: 125 KKHVYSLAMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIV 184
           +KHVYSL++A DKY I +L KFCER ML SL+  +ALD+LEI+++CS   LK++AL+FIV
Sbjct: 180 EKHVYSLSVAADKYEIHFLHKFCERQMLNSLSSSNALDILEISDVCSNLTLKDTALNFIV 239

Query: 185 RNLEEIVFSSGFEAFALKNPHLSVQITRASLMNARENK 223
           +N+E+IVFSS FEAFALKNPHLSVQITRASLM+ +  +
Sbjct: 240 KNMEDIVFSSKFEAFALKNPHLSVQITRASLMDIKNRR 276

[Close]

BLAST of Cla006619 vs. NCBI nr
Match: gi|700190615|gb|KGN45819.1| (hypothetical protein Csa_6G013910 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.2e-98
Identity = 183/216 (84.72%), Postives = 200/216 (92.59%), Query Frame = 1


Query: 12  LQALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRA 71
           LQ LTNASKWIIDLK RE+ELE+KI+FL +F AAFRH+IHTDIQL PGS ASPS+SAHRA
Sbjct: 6   LQTLTNASKWIIDLKNREDELEDKINFLAQFTAAFRHQIHTDIQLNPGSPASPSISAHRA 65

Query: 72  LLATRSEIFKNLLESDGCKTAPMD-AITLSELSHEELESLMEFLYSGDLAEEKVKKHVYS 131
           LLATRSEIFKN+L+SDGCK AP +  ITL ELSHEELESLMEFLYSGDL EEKVKKHVYS
Sbjct: 66  LLATRSEIFKNILDSDGCKAAPTNSTITLPELSHEELESLMEFLYSGDLGEEKVKKHVYS 125

Query: 132 LAMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEI 191
           LA+AGDKY IPYLQKFCERYMLK LNC SALDVLE+AE+CSCR LKESALDFIVRN+EEI
Sbjct: 126 LALAGDKYEIPYLQKFCERYMLKWLNCESALDVLEVAEVCSCRALKESALDFIVRNMEEI 185

Query: 192 VFSSGFEAFALKNPHLSVQITRASLMNARENKPNSA 227
           VFSSGFEAFALKNPHLSVQITRASLM+AR+N+PNS+
Sbjct: 186 VFSSGFEAFALKNPHLSVQITRASLMDARKNRPNSS 221

[Close]

BLAST of Cla006619 vs. NCBI nr
Match: gi|778709628|ref|XP_011656427.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97
Identity = 181/215 (84.19%), Postives = 199/215 (92.56%), Query Frame = 1


Query: 13  QALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRAL 72
           + LTNASKWIIDLK RE+ELE+KI+FL +F AAFRH+IHTDIQL PGS ASPS+SAHRAL
Sbjct: 60  KTLTNASKWIIDLKNREDELEDKINFLAQFTAAFRHQIHTDIQLNPGSPASPSISAHRAL 119

Query: 73  LATRSEIFKNLLESDGCKTAPMD-AITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSL 132
           LATRSEIFKN+L+SDGCK AP +  ITL ELSHEELESLMEFLYSGDL EEKVKKHVYSL
Sbjct: 120 LATRSEIFKNILDSDGCKAAPTNSTITLPELSHEELESLMEFLYSGDLGEEKVKKHVYSL 179

Query: 133 AMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIV 192
           A+AGDKY IPYLQKFCERYMLK LNC SALDVLE+AE+CSCR LKESALDFIVRN+EEIV
Sbjct: 180 ALAGDKYEIPYLQKFCERYMLKWLNCESALDVLEVAEVCSCRALKESALDFIVRNMEEIV 239

Query: 193 FSSGFEAFALKNPHLSVQITRASLMNARENKPNSA 227
           FSSGFEAFALKNPHLSVQITRASLM+AR+N+PNS+
Sbjct: 240 FSSGFEAFALKNPHLSVQITRASLMDARKNRPNSS 274

[Close]

BLAST of Cla006619 vs. NCBI nr
Match: gi|659113789|ref|XP_008456756.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 5.5e-97
Identity = 182/213 (85.45%), Postives = 197/213 (92.49%), Query Frame = 1


Query: 13  QALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRAL 72
           + LTNASKWIIDLK REEELEE+I+FL +F AAFRHRIHTDIQL PGS ASPS+SAHRAL
Sbjct: 60  KTLTNASKWIIDLKNREEELEERINFLAQFTAAFRHRIHTDIQLNPGSPASPSISAHRAL 119

Query: 73  LATRSEIFKNLLESDGCKTAPMDA-ITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSL 132
           LATRS+IFKN+LESDGCK AP ++ ITL ELS EELESLMEFLYSGDLAEEKVKKHVYSL
Sbjct: 120 LATRSDIFKNILESDGCKAAPTNSTITLPELSQEELESLMEFLYSGDLAEEKVKKHVYSL 179

Query: 133 AMAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIV 192
           AMAGDKY IPYLQKFCERYMLK LNC SALDVLEI E+CSCR LKESALDFIVRN+EEIV
Sbjct: 180 AMAGDKYEIPYLQKFCERYMLKWLNCESALDVLEIGEVCSCRALKESALDFIVRNMEEIV 239

Query: 193 FSSGFEAFALKNPHLSVQITRASLMNARENKPN 225
           FSSGFEAFALKNPHLS+QITRASLM+AR+N+PN
Sbjct: 240 FSSGFEAFALKNPHLSLQITRASLMDARKNRPN 272

[Close]

BLAST of Cla006619 vs. NCBI nr
Match: gi|645256208|ref|XP_008233846.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Prunus mume])

HSP 1 Score: 277.7 bits (709), Expect = 1.8e-71
Identity = 137/209 (65.55%), Postives = 166/209 (79.43%), Query Frame = 1


Query: 13  QALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRAL 72
           + L N SKW+ D K   EEL EKI FL  F  AFR +IHTDIQL PG    P + AHRAL
Sbjct: 53  KTLENVSKWVHDRKDASEELNEKIKFLSGFVVAFRDQIHTDIQLHPGDNGPP-IPAHRAL 112

Query: 73  LATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLA 132
           LA RSEIF N+L+SDGCK  P DA+TL EL+HEELESL+EFLY+GDL EEK+ KHVYSL 
Sbjct: 113 LAIRSEIFNNMLDSDGCKAPPNDAVTLIELNHEELESLLEFLYNGDLHEEKMNKHVYSLF 172

Query: 133 MAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVF 192
           +A DKY I YLQK CER+ML+SL+  +ALDVLE+A++CSC  LKE+ALDFIV+N+ +IVF
Sbjct: 173 LAADKYGISYLQKLCERHMLQSLSTANALDVLEVADVCSCLTLKENALDFIVKNMHDIVF 232

Query: 193 SSGFEAFALKNPHLSVQITRASLMNAREN 222
           S+ ++AFALKNPHL VQI+RASLM+A+ N
Sbjct: 233 SAKYDAFALKNPHLCVQISRASLMDAKRN 260

[Close]

BLAST of Cla006619 vs. NCBI nr
Match: gi|297736526|emb|CBI25397.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 276.9 bits (707), Expect = 3.0e-71
Identity = 136/210 (64.76%), Postives = 174/210 (82.86%), Query Frame = 1


Query: 13  QALTNASKWIIDLKKREEELEEKIDFLGEFAAAFRHRIHTDIQLKPGSAASPSVSAHRAL 72
           Q  +NA KW+ ++K+ EEEL EK+ FLG FAAAFR +IHTDI++KPG    PS+ AHRAL
Sbjct: 70  QGFSNALKWVKEMKEIEEELNEKLSFLGGFAAAFRDQIHTDIEVKPGHNG-PSLFAHRAL 129

Query: 73  LATRSEIFKNLLESDGCKTAPMDAITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLA 132
           LA RSEIFKN+L+SDGCK AP + ITL EL+HEEL+SL+EFLYSG L  +KV+KHVYSL+
Sbjct: 130 LAARSEIFKNMLDSDGCKAAPSNTITLPELNHEELDSLLEFLYSGSLPADKVEKHVYSLS 189

Query: 133 MAGDKYAIPYLQKFCERYMLKSLNCGSALDVLEIAEICSCRVLKESALDFIVRNLEEIVF 192
           +A DKY IP+LQKFCE+ ML SL+  SALDVLEI++ CS + +KE+AL++IV+N+E+IVF
Sbjct: 190 LAADKYEIPFLQKFCEQRMLGSLSSSSALDVLEISDACSSQTVKETALNYIVKNMEDIVF 249

Query: 193 SSGFEAFALKNPHLSVQITRASLMNARENK 223
           S+ +E+FALKNPHL VQITRAS M+A+  K
Sbjct: 250 STRYESFALKNPHLCVQITRASFMDAKNRK 278

The following BLAST results are available for this feature:

BLAST of Cla006619 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3623_ARATH	1.1e-57	51.43	BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana GN=At3g56230...	[more]
Y1164_ARATH	5.1e-42	46.32	BTB/POZ domain-containing protein At1g01640 OS=Arabidopsis thaliana GN=At1g01640...	[more]
Y2045_ARATH	3.4e-30	39.34	Putative BTB/POZ domain-containing protein At2g40450 OS=Arabidopsis thaliana GN=...	[more]
Y5851_ARATH	1.2e-27	38.17	BTB/POZ domain-containing protein At5g48510 OS=Arabidopsis thaliana GN=At5g48510...	[more]
Y2044_ARATH	1.0e-26	44.30	Putative BTB/POZ domain-containing protein At2g40440 OS=Arabidopsis thaliana GN=...	[more]

BLAST of Cla006619 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAF8_CUCSA	1.6e-98	84.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013910 PE=4 SV=1	[more]
F6HC57_VITVI	2.8e-71	61.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02290 PE=4 SV=...	[more]
M5X9Y7_PRUPE	6.2e-71	65.70	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016920mg PE=4 SV=1	[more]
A0A068V049_COFCA	1.7e-68	62.98	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039082001 PE=4 SV=1	[more]
A0A0J8CZ30_BETVU	4.9e-68	60.09	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029750 PE=4 S...	[more]

BLAST of Cla006619 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190615\|gb\|KGN45819.1\|	2.2e-98	84.72	hypothetical protein Csa_6G013910 [Cucumis sativus]	[more]
gi\|778709628\|ref\|XP_011656427.1\|	1.9e-97	84.19	PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis sativus]	[more]
gi\|659113789\|ref\|XP_008456756.1\|	5.5e-97	85.45	PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis melo]	[more]
gi\|645256208\|ref\|XP_008233846.1\|	1.8e-71	65.55	PREDICTED: BTB/POZ domain-containing protein At3g56230 [Prunus mume]	[more]
gi\|297736526\|emb\|CBI25397.3\|	3.0e-71	64.76	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000210	BTB/POZ_dom
IPR011333	SKP1/BTB/POZ_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0045491	xylan metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla006619	Cla006619.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000210	BTB/POZ domain	PFAM	PF00651	BTB	coord: 48..154 score: 7.6
IPR000210	BTB/POZ domain	SMART	SM00225	BTB_4	coord: 52..155 score: 1.5
IPR000210	BTB/POZ domain	PROFILE	PS50097	BTB	coord: 52..123 score: 16
IPR011333	SKP1/BTB/POZ domain	unknown	SSF54695	POZ domain	coord: 38..154 score: 2.59
None	No IPR available	GENE3D	G3DSA:3.30.710.10		coord: 37..155 score: 2.7
None	No IPR available	PANTHER	PTHR24413	FAMILY NOT NAMED	coord: 21..217 score: 9.2
None	No IPR available	PANTHER	PTHR24413:SF0	SUBFAMILY NOT NAMED	coord: 21..217 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla006619	Cla97C11G212760	Watermelon (97103) v2	wmwmbB362
Cla006619	Csa6G013910	Cucumber (Chinese Long) v2	cuwmB533
Cla006619	MELO3C019990	Melon (DHL92) v3.5.1	mewmB334
Cla006619	ClCG11G005850	Watermelon (Charleston Gray)	wcgwmB108
Cla006619	CSPI06G01990	Wild cucumber (PI 183967)	cpiwmB552
Cla006619	Cucsa.326140	Cucumber (Gy14) v1	cgywmB592
Cla006619	CmaCh15G001540	Cucurbita maxima (Rimu)	cmawmB283
Cla006619	CmoCh15G001660	Cucurbita moschata (Rifu)	cmowmB274
Cla006619	Lsi03G002790	Bottle gourd (USVL1VR-Ls)	lsiwmB277
Cla006619	Cp4.1LG13g07500	Cucurbita pepo (Zucchini)	cpewmB196
Cla006619	CsGy6G002070	Cucumber (Gy14) v2	cgybwmB497
Cla006619	MELO3C030035.2	Melon (DHL92) v3.6.1	medwmB331
Cla006619	Carg02146	Silver-seed gourd	carwmB0261
Cla006619	CsaV3_6G002140	Cucumber (Chinese Long) v3	cucwmB558
Cla006619	Bhi04G001853	Wax gourd	wgowmB347

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla006619	Cucurbita pepo (Zucchini)	cpewmB461
Cla006619	Cucurbita pepo (Zucchini)	cpewmB464
Cla006619	Silver-seed gourd	carwmB0024
Cla006619	Silver-seed gourd	carwmB0673
Cla006619	Watermelon (97103) v1	wmwmB096
Cla006619	Cucurbita maxima (Rimu)	cmawmB737
Cla006619	Cucurbita maxima (Rimu)	cmawmB740
Cla006619	Cucurbita maxima (Rimu)	cmawmB742
Cla006619	Cucurbita moschata (Rifu)	cmowmB731
Cla006619	Cucurbita moschata (Rifu)	cmowmB734