Lsi03G002790 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGCTCAATCTGCAGCTCATTGCCGGTGATACTCCGGCCACCGCGGAATACAATTTGTGGGTCGTGTTACGACGGAGCAAAGTGTGTGATAAATTTGATAAACAAGCTTCAAAATGATCATAAACCAACTAATAATGTCTCCCCTGTTTCCCCAATTGGCTCTTCCTGTAAGGCAAGTTCTTTCTAATTTCTCTATTTCTTTTCAACTGTTCCTCTTCACATTTGTTTCTGTAAACTAGACTTTCATTTTCTTTTTGTTATATTATAAATTTGGTCTACAATTAATTAAGTTTCTATTTCTACGTAATAGTTCCTTGATCTATTTTATATTATTTTTTAAAAATTTATGGATGTTGATACAAATATTAAAGTTCAAGGTCTATTAGATATTTTTAAAGTTCAATCATCAATTTATTTTGCACAAAATTAAAAGTCTAGATATAATTTTGATATATATATATTTTTTACTATTTTTGTTTAATGTTTTTCATATTGAAGGTAGGATTTAACCACTCTTTAACAAAATTAAAAATGTCTTTAACATAATGTCGTATATTTTAATTAATTTGGATAGAAAAAAAAATGAAATATATCGATTTTTGTGGACTTATTTCTGTCTACATATATAAATTATAGTAAGAAAAATGACATGATTTTAATAGTTTAAAAGTGCTAAAAAAAAGTTACAACCAAAAAGTTAGATATAGAACTTACCTTTGCAAATAAACAATATTGAGAGAATTTTATTAAGTTCATGACAAAGATGAGACATGTGGGCTTCTTTTTAAAAAGCCTAGTTTTGGGTAGATGTTAAATGGGCCAATATTATTGTTTCATTTTACTCCATGAACAAAAATGATATTATTGGAACGAGTTTTATGGGGAAAACATAATTTTGCTTGCACTTTGGTTTATTTTTTTATCCTCTTTTAATTAATAATGTAATGTGAATATGAATAATTAATGAATAAGCAAAAGAAAAAAAAAAAAAAACCATTTATCTTCTATTAAATGAACAAAAATTTATTTACAATAGTAAATAAAAAAGAAAATGCATACAATGAAAAATGGGGTCGTTGGAGTAGTACTTTTGATAGGGACTAGAGTACACAAGAATATTGGATGGTGTTAATTCAAGGACACACCACCTACAAATATTATTCATGAGACTTTAGACAGTACAAAAGTTCGGATAAATAAGCCACTTCAATTAGACACAAAAACATGTAGTATAATTAAATTTGATGCAGTGTTCATAAGAATTATATGACCAAACTTTAAAATGTGTCTAATAAATCTGTATATTTCTAATTTTTTATTTAATAAATCTTTAAATTGTTAATCTTATGTTTAGTGAATATCTTAATTTTAAAAATTTTGAATATGTCACAGAAATAATTAAAAGCTTATAATCTATTATACATTTTTAATATGAATATATATTTTTTGGTGATGTTTTCAAATTTAGAAAAATGAGCCAAATTATGTACAAATACATAAATTTTTTACTGTTTATCAGCGATAGACCACGATAGAATTTTATCACTTGAGCGATAAACAGCGATAGAAGTCTATTACTCAAACGATGGAATTCTATCACGGTCTATTGCTGATAGACAATGAAATTTTCCTATATTTGTAAATAGTTTGATATTTTTATGTTAATAGTAATTCTCTTTTTTTTTATTATTTATTTTTCTTTCTTTGAACAACAGAGAGAATCAAAGTTGAGTTATGCTTATTTTGGCTAATATTGGTATATCTATCCTCCCAAAATTGAGAGTTTCAAGAGAGTTATTAATATAAATTTGAACTTTATGACTAAAATTTTAGGGTGCTCTGGGGATTACTTATGGAAGGAATAAAAGTGATTATAAACAATTCTTAACTATTTTTTTGTGTTTGGTAACACAAATTAGGACTAAATTTGTTGAACCACTTTTAAAAATACGTTCATTTAACGTCTCCTTTAAAATCAATTTCCTATCCGCTTTTAGATTCTCCTAAAATTAAATATAATTTTTAATTAAAATTTAATTTTAATATGTCTATTTCTTTCTCATTTAATCAAATTTATATTCTAATTTATAAAAATTAAATGCATTAATTTTTTTAGAAAATTATATCATATTAATTTTTTTTATAAAAAAAACCGAGTTTTCTCTCTTAATATCGAAAAATTAATCTAGAGCAAACAAAACATATCATTCTAAAAAAATGATTTAAAATTATAAATTATAAAAAAAATAATTTTTTTAATAATAGGTCTATTTTAGCTATTATAACCAAAGCAAGGACAATTTAATATTTATATAACTAACATTATAACCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTAATTCAAGCTTAAATTTATCAAACATTATAATCTATTTATTTGATTTTTCTGAACTAAGCCTTGAGCACCTCCTTCTGCAGACACTCACGAATGCTTCAAAATGGATAATAGACTTAAAAAACAGAGAACAAGAATTAGAAGAAAAAATCGATTTCCTCAGCGAGTTCGCGGCGGCTTTCCGCCGCTGCATTCACACCGATATTCAACTCAAGCCGGGCTCCGCCGCGTCTCCTTCGATTTTTGCTCACAGAGCCCTACTGGTAATAAAATCCCCTTTTTCCAATTTCAACATCCATCCAATCCAAATCCAACATAAATCGCTAAGCATTTTCCCTCAATTACAGGCCACAAGATCAGAAATCTTCAAAAACCTATTCGAATCGGACGGGTGCAAGGCCGCTCCAATGGACACGATCACGCTGTCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCTTGTACAGCGGCGATTTGGCGGAAGAGAAAGTGAAGAAGCATGTGTATTCGTTGGCTATGGCGGGTGATAAATATGAGATTCCATACTTGCAGAAGTTTTGCGAAAGGTATATGTTGAAATCGTTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAGTTTGTTCATGTAGAATGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACATGGAGGAGATTGTGTTTTCCTCTGGATTTGAAGCATTTGCCCTCAAGAATCCCCATCTCTCTCTCCAGATTACTAGAGCTTCTTTAATGGATGCCAGAAAAAACAAATCTAATTCTGCTTGA ATGGATTGCTCAATCTGCAGCTCATTGCCGGTGATACTCCGGCCACCGCGGAATACAATTTGTGGGTCGTGTTACGACGGAGCAAAGTGTGTGATAAATTTGATAAACAAGCTTCAAAATGATCATAAACCAACTAATAATGTCTCCCCTGTTTCCCCAATTGGCTCTTCCTACTTAAAAAACAGAGAACAAGAATTAGAAGAAAAAATCGATTTCCTCAGCGAGTTCGCGGCGGCTTTCCGCCGCTGCATTCACACCGATATTCAACTCAAGCCGGGCTCCGCCGCGTCTCCTTCGATTTTTGCTCACAGAGCCCTACTGGCCACAAGATCAGAAATCTTCAAAAACCTATTCGAATCGGACGGGTGCAAGGCCGCTCCAATGGACACGATCACGCTGTCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCTTGTACAGCGGCGATTTGGCGGAAGAGAAAGTGAAGAAGCATGTGTATTCGTTGGCTATGGCGGGTGATAAATATGAGATTCCATACTTGCAGAAGTTTTGCGAAAGGTATATGTTGAAATCGTTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAGTTTGTTCATGTAGAATGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACATGGAGGAGATTGTGTTTTCCTCTGGATTTGAAGCATTTGCCCTCAAGAATCCCCATCTCTCTCTCCAGATTACTAGAGCTTCTTTAATGGATGCCAGAAAAAACAAATCTAATTCTGCTTGA ATGGATTGCTCAATCTGCAGCTCATTGCCGGTGATACTCCGGCCACCGCGGAATACAATTTGTGGGTCGTGTTACGACGGAGCAAAGTGTGTGATAAATTTGATAAACAAGCTTCAAAATGATCATAAACCAACTAATAATGTCTCCCCTGTTTCCCCAATTGGCTCTTCCTACTTAAAAAACAGAGAACAAGAATTAGAAGAAAAAATCGATTTCCTCAGCGAGTTCGCGGCGGCTTTCCGCCGCTGCATTCACACCGATATTCAACTCAAGCCGGGCTCCGCCGCGTCTCCTTCGATTTTTGCTCACAGAGCCCTACTGGCCACAAGATCAGAAATCTTCAAAAACCTATTCGAATCGGACGGGTGCAAGGCCGCTCCAATGGACACGATCACGCTGTCGGAGTTGAGCCACGAGGAGCTGGAATCACTCATGGAGTTCTTGTACAGCGGCGATTTGGCGGAAGAGAAAGTGAAGAAGCATGTGTATTCGTTGGCTATGGCGGGTGATAAATATGAGATTCCATACTTGCAGAAGTTTTGCGAAAGGTATATGTTGAAATCGTTGAATTGTGGGAGCGCTCTGGATGTGTTGGAAATTGCAGAAGTTTGTTCATGTAGAATGTTGAAGGAGAGCGCGTTGGATTTCATTGTTAGAAACATGGAGGAGATTGTGTTTTCCTCTGGATTTGAAGCATTTGCCCTCAAGAATCCCCATCTCTCTCTCCAGATTACTAGAGCTTCTTTAATGGATGCCAGAAAAAACAAATCTAATTCTGCTTGA MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDHKPTNNVSPVSPIGSSYLKNREQELEEKIDFLSEFAAAFRRCIHTDIQLKPGSAASPSIFAHRALLATRSEIFKNLFESDGCKAAPMDTITLSELSHEELESLMEFLYSGDLAEEKVKKHVYSLAMAGDKYEIPYLQKFCERYMLKSLNCGSALDVLEIAEVCSCRMLKESALDFIVRNMEEIVFSSGFEAFALKNPHLSLQITRASLMDARKNKSNSA
BLAST of Lsi03G002790 vs. Swiss-Prot
Match: Y3623_ARATH (BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana GN=At3g56230 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.8e-68 Identity = 136/281 (48.40%), Postives = 192/281 (68.33%), Query Frame = 1
BLAST of Lsi03G002790 vs. Swiss-Prot
Match: Y1164_ARATH (BTB/POZ domain-containing protein At1g01640 OS=Arabidopsis thaliana GN=At1g01640 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39 Identity = 88/198 (44.44%), Postives = 134/198 (67.68%), Query Frame = 1
BLAST of Lsi03G002790 vs. Swiss-Prot
Match: Y2045_ARATH (Putative BTB/POZ domain-containing protein At2g40450 OS=Arabidopsis thaliana GN=At2g40450 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30 Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 1
BLAST of Lsi03G002790 vs. Swiss-Prot
Match: Y5851_ARATH (BTB/POZ domain-containing protein At5g48510 OS=Arabidopsis thaliana GN=At5g48510 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26 Identity = 66/168 (39.29%), Postives = 107/168 (63.69%), Query Frame = 1
BLAST of Lsi03G002790 vs. Swiss-Prot
Match: Y2044_ARATH (Putative BTB/POZ domain-containing protein At2g40440 OS=Arabidopsis thaliana GN=At2g40440 PE=3 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25 Identity = 65/149 (43.62%), Postives = 95/149 (63.76%), Query Frame = 1
BLAST of Lsi03G002790 vs. TrEMBL
Match: A0A0A0KAF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013910 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90 Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 1
BLAST of Lsi03G002790 vs. TrEMBL
Match: F6HC57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02290 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.7e-86 Identity = 167/269 (62.08%), Postives = 210/269 (78.07%), Query Frame = 1
BLAST of Lsi03G002790 vs. TrEMBL
Match: A0A0D2TGU8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G016300 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 5.1e-85 Identity = 169/273 (61.90%), Postives = 207/273 (75.82%), Query Frame = 1
BLAST of Lsi03G002790 vs. TrEMBL
Match: A0A0D2V0L6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G016300 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.6e-85 Identity = 169/275 (61.45%), Postives = 207/275 (75.27%), Query Frame = 1
BLAST of Lsi03G002790 vs. TrEMBL
Match: A0A067JFX6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03359 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 7.3e-84 Identity = 164/268 (61.19%), Postives = 208/268 (77.61%), Query Frame = 1
BLAST of Lsi03G002790 vs. TAIR10
Match: AT3G56230.1 (AT3G56230.1 BTB/POZ domain-containing protein) HSP 1 Score: 260.0 bits (663), Expect = 1.6e-69 Identity = 136/281 (48.40%), Postives = 192/281 (68.33%), Query Frame = 1
BLAST of Lsi03G002790 vs. TAIR10
Match: AT1G01640.1 (AT1G01640.1 BTB/POZ domain-containing protein) HSP 1 Score: 164.5 bits (415), Expect = 8.9e-41 Identity = 88/198 (44.44%), Postives = 134/198 (67.68%), Query Frame = 1
BLAST of Lsi03G002790 vs. TAIR10
Match: AT2G40450.1 (AT2G40450.1 BTB/POZ domain-containing protein) HSP 1 Score: 134.4 bits (337), Expect = 9.9e-32 Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 1
BLAST of Lsi03G002790 vs. TAIR10
Match: AT5G48510.1 (AT5G48510.1 BTB/POZ domain-containing protein) HSP 1 Score: 120.2 bits (300), Expect = 1.9e-27 Identity = 66/168 (39.29%), Postives = 107/168 (63.69%), Query Frame = 1
BLAST of Lsi03G002790 vs. TAIR10
Match: AT4G04090.1 (AT4G04090.1 BTB/POZ domain-containing protein) HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 1
BLAST of Lsi03G002790 vs. NCBI nr
Match: gi|778709628|ref|XP_011656427.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis sativus]) HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-120 Identity = 230/274 (83.94%), Postives = 242/274 (88.32%), Query Frame = 1
BLAST of Lsi03G002790 vs. NCBI nr
Match: gi|659113789|ref|XP_008456756.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230 [Cucumis melo]) HSP 1 Score: 439.9 bits (1130), Expect = 3.1e-120 Identity = 231/272 (84.93%), Postives = 240/272 (88.24%), Query Frame = 1
BLAST of Lsi03G002790 vs. NCBI nr
Match: gi|700190615|gb|KGN45819.1| (hypothetical protein Csa_6G013910 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 1.5e-90 Identity = 175/203 (86.21%), Postives = 187/203 (92.12%), Query Frame = 1
BLAST of Lsi03G002790 vs. NCBI nr
Match: gi|747060375|ref|XP_011076615.1| (PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Sesamum indicum]) HSP 1 Score: 333.2 bits (853), Expect = 4.1e-88 Identity = 168/265 (63.40%), Postives = 210/265 (79.25%), Query Frame = 1
BLAST of Lsi03G002790 vs. NCBI nr
Match: gi|731411988|ref|XP_003633433.2| (PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Vitis vinifera]) HSP 1 Score: 326.6 bits (836), Expect = 3.9e-86 Identity = 167/269 (62.08%), Postives = 210/269 (78.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |