Carg00744 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACTTCTCCCTCCAAATTTACCCCTACTTCTCTCGTAAGTTCGCACCTCTTTCTTCTCTTCCCTTTCTTTTTTCCACTTTTGATTGCACAAACCATCGATTAATCTTTTTTTTCTCTGGAGCAGGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCTATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCGAATTGCGGTTCCTTGA ATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACTTCTCCCTCCAAATTTACCCCTACTTCTCTCGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCTATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCGAATTGCGGTTCCTTGA ATGGAGAGCCCCGATTTCTCACCGCCTCACGCCGACGCATCCAGACCCTCCTTAGCCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAATTTAACCCTACTTCTCCCTCCAAATTTACCCCTACTTCTCTCGATTTGGAGAAGAATCAGAGAGACAGCTTATCGGTGATGATGCCCGGGGATTCCATTCCCAAGTTCATTGCTATGCCGTGCCCCAGGGAGCCGCCACGCCCGGAGATGGTCGAGGTAAAAGTGGAGAAACCGCCGAAGCCGCCGCGAATTGCGGTTCCTTGA MESPDFSPPHADASRPSLAFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQFNPTSPSKFTPTSLDLEKNQRDSLSVMMPGDSIPKFIAMPCPREPPRPEMVEVKVEKPPKPPRIAVP
BLAST of Carg00744 vs. NCBI nr
Match: XP_022949671.1 (uncharacterized protein At5g65660-like [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 4.7e-62 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg00744 vs. NCBI nr
Match: XP_023543383.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.5 bits (628), Expect = 4.7e-62 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg00744 vs. NCBI nr
Match: XP_022979056.1 (uncharacterized protein At5g65660-like [Cucurbita maxima]) HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55 Identity = 117/125 (93.60%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Carg00744 vs. NCBI nr
Match: XP_022133072.1 (uncharacterized protein At5g65660 [Momordica charantia]) HSP 1 Score: 219.9 bits (559), Expect = 4.7e-54 Identity = 112/127 (88.19%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Carg00744 vs. NCBI nr
Match: XP_023518276.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.5 bits (550), Expect = 5.2e-53 Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Carg00744 vs. TAIR10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 143.3 bits (360), Expect = 1.0e-34 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Carg00744 vs. Swiss-Prot
Match: sp|Q9LSK9|Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Carg00744 vs. TrEMBL
Match: tr|A0A1S3B1W3|A0A1S3B1W3_CUCME (uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 4.0e-46 Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Carg00744 vs. TrEMBL
Match: tr|A0A0A0KGL6|A0A0A0KGL6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.8e-45 Identity = 102/131 (77.86%), Postives = 109/131 (83.21%), Query Frame = 0
BLAST of Carg00744 vs. TrEMBL
Match: tr|A0A061DHB3|A0A061DHB3_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao OX=3641 GN=TCM_000913 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40 Identity = 89/129 (68.99%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of Carg00744 vs. TrEMBL
Match: tr|A0A2H5NF83|A0A2H5NF83_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_039830 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.7e-40 Identity = 89/129 (68.99%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of Carg00744 vs. TrEMBL
Match: tr|V4SKQ2|V4SKQ2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026757mg PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.4e-40 Identity = 89/129 (68.99%), Postives = 100/129 (77.52%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|