ClCG01G018140 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G018140
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	hydroxyproline-rich glycoprotein family protein LENGTH=136
Location	CG_Chr01 : 32697690 .. 32698557 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAATGCTCCTTCTATTTTCTCATTCCATTCTTCTTTTCCTTCCAGATTTGGATACAGCCATTGCCATTGCTGTTTTCATCCTTCCCATTCCTTATTCCTTCTCCCAACACATGACTGCAGATTCCACATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGATAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCTTTACATGATCACGATCTTCACCTCCGATCATCTCCCTCCAAATCTAACCCTACTTCCCAGGTAATTTCGCTGCTCCTTGATCGGTTTCTTTCTTTTTTCTAATTTTGATTGCTGAAACCCTGAAACGATGAATTGATTTTTCTGGATCAGGATTTGGAGAAGAATCAGAGAGAGAGCTTGTCGGTGTTGATGCCTGGGGATTCTGTTCCGAAGTTCATTGCGATGCCATGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCTGCGGATTGCGGTTCCTTTCTATTAGCTGATTCAGATTCACCATTGATTGATCTGTGTACATAGTAGAAGCAAATGAATTCTTTTCAGTTTCATCGTTTATCTTTCCTTGAGAAGGGGAATTTCAAGGGATTCCAATTTCATTTTGTATATTTTACAAGCGTTCGTCACCAAGTTTCGTCTCTGCCTCTCGGCAGTTACAAACTTACGGCGGAAAAAAAAAAAAAAAAGCATAATTATGAATTAGAAGCAGTTTATTTTATTAATGGTTTGAGAA

mRNA sequence

CCCAAATGCTCCTTCTATTTTCTCATTCCATTCTTCTTTTCCTTCCAGATTTGGATACAGCCATTGCCATTGCTGTTTTCATCCTTCCCATTCCTTATTCCTTCTCCCAACACATGACTGCAGATTCCACATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGATAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCTTTACATGATCACGATCTTCACCTCCGATCATCTCCCTCCAAATCTAACCCTACTTCCCAGGATTTGGAGAAGAATCAGAGAGAGAGCTTGTCGGTGTTGATGCCTGGGGATTCTGTTCCGAAGTTCATTGCGATGCCATGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCTGCGGATTGCGGTTCCTTTCTATTAGCTGATTCAGATTCACCATTGATTGATCTGTGTACATAGTAGAAGCAAATGAATTCTTTTCAGTTTCATCGTTTATCTTTCCTTGAGAAGGGGAATTTCAAGGGATTCCAATTTCATTTTGTATATTTTACAAGCGTTCGTCACCAAGTTTCGTCTCTGCCTCTCGGCAGTTACAAACTTACGGCGGAAAAAAAAAAAAAAAAGCATAATTATGAATTAGAAGCAGTTTATTTTATTAATGGTTTGAGAA

Coding sequence (CDS)

ATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGCTATCACTGGGATAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCTTTACATGATCACGATCTTCACCTCCGATCATCTCCCTCCAAATCTAACCCTACTTCCCAGGATTTGGAGAAGAATCAGAGAGAGAGCTTGTCGGTGTTGATGCCTGGGGATTCTGTTCCGAAGTTCATTGCGATGCCATGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCTGCGGATTGCGGTTCCTTTCTATTAG

Protein sequence

MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

Homology

[Close]

BLAST of ClCG01G018140 vs. Swiss-Prot
Match: Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-39
Identity = 81/133 (60.90%), Postives = 93/133 (69.92%), Query Frame = 1


Query: 5   DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH 64
           DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +      D  
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRPSAD-- 65

Query: 65  LRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPP-- 124
           + S+P K  P   +++K Q  S+ VLMPGD+ PKFIA+PCP  PPRPE + V V+ PP  
Sbjct: 66  IESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQS 125

Query: 125 ---KPLRIAVPFY 133
              KP R  VP Y
Sbjct: 126 PPVKPARFPVPLY 136

[Close]

BLAST of ClCG01G018140 vs. TrEMBL
Match: A0A0A0KGL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497240 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-59
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL D
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRD 60

Query: 61  H-DLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVE 120
           H  LHL+S PSKSNPT  DLEKNQRESLSVLMPGDS+PKFIAMPCPREP RPE IEVKVE
Sbjct: 61  HRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPETIEVKVE 120

Query: 121 KPPKPLRIAVPFY 133
           KP KPLRIAVPFY
Sbjct: 121 KPVKPLRIAVPFY 132

[Close]

BLAST of ClCG01G018140 vs. TrEMBL
Match: A0A061DHB3_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_000913 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-46
Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           ME+ D SPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDKLRSLRRS S     
Sbjct: 1   MENQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSISDGT-G 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
            D  + +SPSKS P   DL++NQ +SL VLMPGD +PKFIA PCP EPP P+ +EVKV+K
Sbjct: 61  PDADIEASPSKSKPEYMDLKENQSQSLPVLMPGDQIPKFIAFPCPCEPPGPDKVEVKVQK 120

Query: 121 PPKPLRIAVPFY 133
           PPKP R  VP Y
Sbjct: 121 PPKPPRFPVPLY 131

[Close]

BLAST of ClCG01G018140 vs. TrEMBL
Match: M5WPE1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013265mg PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.9e-46
Identity = 91/132 (68.94%), Postives = 103/132 (78.03%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           MES DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDKLRSLRRS +Q    
Sbjct: 1   MESQDFSPPHVDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFTQDADP 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
                  SPSKS P   DL++ QR+SL V+MPGD +PKF+A+PCPREPPR E I VKV+K
Sbjct: 61  EADAEPQSPSKSKPPHMDLKQKQRQSLPVIMPGDQIPKFMALPCPREPPREEKIVVKVQK 120

Query: 121 PPKPLRIAVPFY 133
            PKP R  VP Y
Sbjct: 121 QPKPPRFPVPLY 132

[Close]

BLAST of ClCG01G018140 vs. TrEMBL
Match: A0A0D2PD18_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G229800 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.9e-46
Identity = 91/132 (68.94%), Postives = 107/132 (81.06%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           ME+ + SPPH DASRPSLGFPLGTALLL+++F+LSGIFSCCYHWDKLRSLR S + P  D
Sbjct: 1   MENHNLSPPHVDASRPSLGFPLGTALLLIIVFSLSGIFSCCYHWDKLRSLRGSFAHPHVD 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
               + +SPSKSNP S  L+KNQ +S SVLMPGD++PKFIA+PCP EPPR + +EVKVEK
Sbjct: 61  ----IEASPSKSNPHSPVLKKNQSQSFSVLMPGDAIPKFIALPCPCEPPRVDKVEVKVEK 120

Query: 121 PPKPLRIAVPFY 133
           PPKP R  VP Y
Sbjct: 121 PPKPPRFPVPLY 128

[Close]

BLAST of ClCG01G018140 vs. TrEMBL
Match: V4SKQ2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026757mg PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-44
Identity = 92/132 (69.70%), Postives = 103/132 (78.03%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           ME+ DFSPPH DASRPSLGFPLGTALLL+VIF+LSGIFSCCYHWDK+RSLRRS S+   D
Sbjct: 1   MENQDFSPPHGDASRPSLGFPLGTALLLIVIFSLSGIFSCCYHWDKVRSLRRSFSEHA-D 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
            +     SPSKS     DL+KNQ +SL VLMPGD +PKFIA+PCP EPPR E I VKV+K
Sbjct: 61  PEADNEGSPSKSKAAHMDLKKNQSQSLPVLMPGDQIPKFIALPCPCEPPRAEKIVVKVQK 120

Query: 121 PPKPLRIAVPFY 133
           PPK  R  VP Y
Sbjct: 121 PPKLPRFPVPLY 131

[Close]

BLAST of ClCG01G018140 vs. TAIR10
Match: AT5G65660.1 (AT5G65660.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-40
Identity = 81/133 (60.90%), Postives = 93/133 (69.92%), Query Frame = 1


Query: 5   DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH 64
           DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +      D  
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRPSAD-- 65

Query: 65  LRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPP-- 124
           + S+P K  P   +++K Q  S+ VLMPGD+ PKFIA+PCP  PPRPE + V V+ PP  
Sbjct: 66  IESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQS 125

Query: 125 ---KPLRIAVPFY 133
              KP R  VP Y
Sbjct: 126 PPVKPARFPVPLY 136

[Close]

BLAST of ClCG01G018140 vs. NCBI nr
Match: gi|659079896|ref|XP_008440504.1| (PREDICTED: uncharacterized protein At5g65660 [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-60
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQPL D
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60

Query: 61  -HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVE 120
            HDLH +S PSKSNPT QDLEKNQRESLSVLMPGDS+PKFIAMPCPREP RPEMIEVKVE
Sbjct: 61  RHDLHPQSPPSKSNPT-QDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE 120

Query: 121 KPPKPLRIAVPFY 133
           KP KPLRIAVPFY
Sbjct: 121 KPLKPLRIAVPFY 132

[Close]

BLAST of ClCG01G018140 vs. NCBI nr
Match: gi|449451365|ref|XP_004143432.1| (PREDICTED: uncharacterized protein At5g65660 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL D
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRD 60

Query: 61  H-DLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVE 120
           H  LHL+S PSKSNPT  DLEKNQRESLSVLMPGDS+PKFIAMPCPREP RPE IEVKVE
Sbjct: 61  HRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPETIEVKVE 120

Query: 121 KPPKPLRIAVPFY 133
           KP KPLRIAVPFY
Sbjct: 121 KPVKPLRIAVPFY 132

[Close]

BLAST of ClCG01G018140 vs. NCBI nr
Match: gi|1009145774|ref|XP_015890520.1| (PREDICTED: uncharacterized protein At5g65660 [Ziziphus jujuba])

HSP 1 Score: 196.1 bits (497), Expect = 4.0e-47
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           MESPD SPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDKL+SLRRS S   H 
Sbjct: 1   MESPDISPPHGDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLKSLRRSFSDEPHP 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKV-E 120
                + SPSKS P+  DL++N+R+SL VLMPGD VPKFIA+PCP EPPR E IE+KV E
Sbjct: 61  EADIEQQSPSKSKPSFMDLKQNERQSLPVLMPGDKVPKFIALPCPCEPPREEKIEIKVAE 120

Query: 121 KPPKPLRIAVPFY 133
            PPKP R+AVP Y
Sbjct: 121 PPPKPPRMAVPLY 133

[Close]

BLAST of ClCG01G018140 vs. NCBI nr
Match: gi|590706330|ref|XP_007047692.1| (Hydroxyproline-rich glycoprotein family protein [Theobroma cacao])

HSP 1 Score: 191.8 bits (486), Expect = 7.5e-46
Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           ME+ D SPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDKLRSLRRS S     
Sbjct: 1   MENQDLSPPHVDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSISDGT-G 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
            D  + +SPSKS P   DL++NQ +SL VLMPGD +PKFIA PCP EPP P+ +EVKV+K
Sbjct: 61  PDADIEASPSKSKPEYMDLKENQSQSLPVLMPGDQIPKFIAFPCPCEPPGPDKVEVKVQK 120

Query: 121 PPKPLRIAVPFY 133
           PPKP R  VP Y
Sbjct: 121 PPKPPRFPVPLY 131

[Close]

BLAST of ClCG01G018140 vs. NCBI nr
Match: gi|823193394|ref|XP_012492055.1| (PREDICTED: uncharacterized protein At5g65660-like [Gossypium raimondii])

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45
Identity = 91/132 (68.94%), Postives = 107/132 (81.06%), Query Frame = 1


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60
           ME+ + SPPH DASRPSLGFPLGTALLL+++F+LSGIFSCCYHWDKLRSLR S + P  D
Sbjct: 1   MENHNLSPPHVDASRPSLGFPLGTALLLIIVFSLSGIFSCCYHWDKLRSLRGSFAHPHVD 60

Query: 61  HDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
               + +SPSKSNP S  L+KNQ +S SVLMPGD++PKFIA+PCP EPPR + +EVKVEK
Sbjct: 61  ----IEASPSKSNPHSPVLKKNQSQSFSVLMPGDAIPKFIALPCPCEPPRVDKVEVKVEK 120

Query: 121 PPKPLRIAVPFY 133
           PPKP R  VP Y
Sbjct: 121 PPKPPRFPVPLY 128

The following BLAST results are available for this feature:

BLAST of ClCG01G018140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5566_ARATH	1.8e-39	60.90	Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1	[more]

BLAST of ClCG01G018140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGL6_CUCSA	1.1e-59	88.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497240 PE=4 SV=1	[more]
A0A061DHB3_THECC	5.2e-46	68.94	Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_000913...	[more]
M5WPE1_PRUPE	8.9e-46	68.94	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013265mg PE=4 SV=1	[more]
A0A0D2PD18_GOSRA	8.9e-46	68.94	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G229800 PE=4 SV=1	[more]
V4SKQ2_9ROSI	1.3e-44	69.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026757mg PE=4 SV=1	[more]

BLAST of ClCG01G018140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65660.1	1.0e-40	60.90	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of ClCG01G018140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079896\|ref\|XP_008440504.1\|	1.1e-60	90.23	PREDICTED: uncharacterized protein At5g65660 [Cucumis melo]	[more]
gi\|449451365\|ref\|XP_004143432.1\|	1.6e-59	88.72	PREDICTED: uncharacterized protein At5g65660 [Cucumis sativus]	[more]
gi\|1009145774\|ref\|XP_015890520.1\|	4.0e-47	71.43	PREDICTED: uncharacterized protein At5g65660 [Ziziphus jujuba]	[more]
gi\|590706330\|ref\|XP_007047692.1\|	7.5e-46	68.94	Hydroxyproline-rich glycoprotein family protein [Theobroma cacao]	[more]
gi\|823193394\|ref\|XP_012492055.1\|	1.3e-45	68.94	PREDICTED: uncharacterized protein At5g65660-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G018140.1	ClCG01G018140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34291	FAMILY NOT NAMED	coord: 1..124 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G018140	Csa6G497240	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G018140	MELO3C007692	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G018140	Cla014083	Watermelon (97103) v1	wcgwmB141
ClCG01G018140	Cla97C01G017410	Watermelon (97103) v2	wcgwmbB089
ClCG01G018140	Bhi03G001341	Wax gourd	wcgwgoB230
ClCG01G018140	CSPI06G29480	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G018140	Cucsa.103740	Cucumber (Gy14) v1	cgywcgB134
ClCG01G018140	CmaCh03G008590	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G018140	CmaCh07G005950	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G018140	CmoCh07G006000	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G018140	CmoCh03G008960	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G018140	Lsi01G008330	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G018140	Cp4.1LG10g01610	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G018140	Cp4.1LG19g10290	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G018140	CsGy6G029000	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G018140	MELO3C007692.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G018140	Carg00744	Silver-seed gourd	carwcgB0397
ClCG01G018140	Carg18499	Silver-seed gourd	carwcgB0002
ClCG01G018140	CsaV3_6G044700	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G018140	Cucurbita maxima (Rimu)	cmawcgB152
ClCG01G018140	Cucurbita maxima (Rimu)	cmawcgB692
ClCG01G018140	Cucurbita moschata (Rifu)	cmowcgB140
ClCG01G018140	Cucurbita moschata (Rifu)	cmowcgB698
ClCG01G018140	Wild cucumber (PI 183967)	cpiwcgB122
ClCG01G018140	Wild cucumber (PI 183967)	cpiwcgB213
ClCG01G018140	Cucumber (Chinese Long) v2	cuwcgB115
ClCG01G018140	Cucumber (Chinese Long) v2	cuwcgB210
ClCG01G018140	Melon (DHL92) v3.5.1	mewcgB279
ClCG01G018140	Melon (DHL92) v3.5.1	mewcgB325
ClCG01G018140	Watermelon (97103) v1	wcgwmB122
ClCG01G018140	Watermelon (97103) v1	wcgwmB167
ClCG01G018140	Cucurbita pepo (Zucchini)	cpewcgB102
ClCG01G018140	Bottle gourd (USVL1VR-Ls)	lsiwcgB272
ClCG01G018140	Bottle gourd (USVL1VR-Ls)	lsiwcgB329
ClCG01G018140	Bottle gourd (USVL1VR-Ls)	lsiwcgB426
ClCG01G018140	Cucumber (Gy14) v2	cgybwcgB194
ClCG01G018140	Cucumber (Gy14) v2	cgybwcgB112
ClCG01G018140	Melon (DHL92) v3.6.1	medwcgB269
ClCG01G018140	Melon (DHL92) v3.6.1	medwcgB318
ClCG01G018140	Silver-seed gourd	carwcgB0061
ClCG01G018140	Cucumber (Chinese Long) v3	cucwcgB129
ClCG01G018140	Watermelon (97103) v2	wcgwmbB099
ClCG01G018140	Watermelon (97103) v2	wcgwmbB124
ClCG01G018140	Wax gourd	wcgwgoB223
ClCG01G018140	Wax gourd	wcgwgoB253
ClCG01G018140	Watermelon (Charleston Gray)	wcgwcgB061
ClCG01G018140	Watermelon (Charleston Gray)	wcgwcgB114
ClCG01G018140	Cucumber (Gy14) v1	cgywcgB277
ClCG01G018140	Cucumber (Gy14) v1	cgywcgB538