Carg18499 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCATCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGTAATTTTAATTCCGCTGCTTCTTCATCATTTCCTTTCTTTCTTTCGATTGTTTAAACGAGGAATTGATTTTTTGGAATAGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCCTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCATGTGAAAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAG ATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCATCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCCTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCATGTGAAAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAG ATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCATCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCCTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCATGTGAAAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAG METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
BLAST of Carg18499 vs. NCBI nr
Match: XP_022962719.1 (uncharacterized protein At5g65660-like [Cucurbita moschata]) HSP 1 Score: 269.6 bits (688), Expect = 5.5e-69 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg18499 vs. NCBI nr
Match: XP_023518276.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67 Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg18499 vs. NCBI nr
Match: XP_023003846.1 (uncharacterized protein At5g65660-like [Cucurbita maxima]) HSP 1 Score: 263.5 bits (672), Expect = 4.0e-67 Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg18499 vs. NCBI nr
Match: XP_022133072.1 (uncharacterized protein At5g65660 [Momordica charantia]) HSP 1 Score: 232.3 bits (591), Expect = 9.8e-58 Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 0
BLAST of Carg18499 vs. NCBI nr
Match: XP_023543383.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54 Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0
BLAST of Carg18499 vs. TAIR10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 148.7 bits (374), Expect = 2.6e-36 Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 0
BLAST of Carg18499 vs. Swiss-Prot
Match: sp|Q9LSK9|Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.6e-35 Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 0
BLAST of Carg18499 vs. TrEMBL
Match: tr|A0A1S3B1W3|A0A1S3B1W3_CUCME (uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.5e-51 Identity = 104/132 (78.79%), Postives = 113/132 (85.61%), Query Frame = 0
BLAST of Carg18499 vs. TrEMBL
Match: tr|A0A0A0KGL6|A0A0A0KGL6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50 Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 0
BLAST of Carg18499 vs. TrEMBL
Match: tr|A0A061DHB3|A0A061DHB3_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao OX=3641 GN=TCM_000913 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.8e-42 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of Carg18499 vs. TrEMBL
Match: tr|A0A0D2PD18|A0A0D2PD18_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G229800 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.0e-42 Identity = 88/132 (66.67%), Postives = 105/132 (79.55%), Query Frame = 0
BLAST of Carg18499 vs. TrEMBL
Match: tr|A0A2H5NF83|A0A2H5NF83_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_039830 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 8.5e-42 Identity = 91/133 (68.42%), Postives = 105/133 (78.95%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |