Carg03021 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAATAAAATATTTTTGTGCATAAATTGAATTGTCATCAACAAATCTGCAGAATTTGATCGGAGGAAGATCGAGAGATACAAGAAATGGAGTACGATGACCGCGAAGCACAGGATTCCGCCTCTCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCAATTCTCGGCTGTCCCGATCACGCCGACCACCGTCATCCTTCTATTCCGCCGGAAACCCCCGCCTTTTCGCCGCCTGATAAATTCTCCCCAATCCATACGGTGCGTTTTGCTCCTTCTACTTCTTGTTTAGCTAGTCCATACGGTGCGTTTTGTTCCGCCGGAGAATTATTTATTTATTTTTTATTTTTTTAAACTGAGAATTTAAATATCGAATAAATATATATTTTTTTTTTTTGATGTTTCCTTTATATCTTTTTTTTTTTTTCTAAATAAAAGATATGGAAGGAGAATCGGCCGGAAAGTCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGGGGCGGCGCCGTTGGTAGAAATTGTAATACAGAAACCTTCTCAGAGTATTTCTGAAGCTCTCCCTTCAAATTAATGTCGTTTTTGTTCATATGAATTTGAATATTCCATTATTCCTTTGGAATTTGTAGCAATGTTCAAATATTTCTCTTAATTAATTCCTAATATGTACATGGAGAAATTCTGTTTTTGG TAAAATAAAATATTTTTGTGCATAAATTGAATTGTCATCAACAAATCTGCAGAATTTGATCGGAGGAAGATCGAGAGATACAAGAAATGGAGTACGATGACCGCGAAGCACAGGATTCCGCCTCTCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCAATTCTCGGCTGTCCCGATCACGCCGACCACCGTCATCCTTCTATTCCGCCGGAAACCCCCGCCTTTTCGCCGCCTGATAAATTCTCCCCAATCCATACGATATGGAAGGAGAATCGGCCGGAAAGTCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGGGGCGGCGCCGTTGGTAGAAATTGTAATACAGAAACCTTCTCAGAGTATTTCTGAAGCTCTCCCTTCAAATTAATGTCGTTTTTGTTCATATGAATTTGAATATTCCATTATTCCTTTGGAATTTGTAGCAATGTTCAAATATTTCTCTTAATTAATTCCTAATATGTACATGGAGAAATTCTGTTTTTGG ATGGAGTACGATGACCGCGAAGCACAGGATTCCGCCTCTCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCAATTCTCGGCTGTCCCGATCACGCCGACCACCGTCATCCTTCTATTCCGCCGGAAACCCCCGCCTTTTCGCCGCCTGATAAATTCTCCCCAATCCATACGATATGGAAGGAGAATCGGCCGGAAAGTCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGGGGCGGCGCCGTTGGTAGAAATTGTAATACAGAAACCTTCTCAGAGTATTTCTGAAGCTCTCCCTTCAAATTAA MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGAAPLVEIVIQKPSQSISEALPSN
BLAST of Carg03021 vs. NCBI nr
Match: XP_022936981.1 (uncharacterized protein At5g65660-like [Cucurbita moschata]) HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71 Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Carg03021 vs. NCBI nr
Match: XP_022975977.1 (uncharacterized protein At5g65660-like [Cucurbita maxima]) HSP 1 Score: 273.9 bits (699), Expect = 2.9e-70 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg03021 vs. NCBI nr
Match: XP_023536259.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.9 bits (694), Expect = 1.1e-69 Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of Carg03021 vs. NCBI nr
Match: XP_008466113.1 (PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 94/132 (71.21%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of Carg03021 vs. NCBI nr
Match: XP_022981076.1 (uncharacterized protein At5g65660-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 88/128 (68.75%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of Carg03021 vs. TAIR10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11 Identity = 42/113 (37.17%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of Carg03021 vs. Swiss-Prot
Match: sp|Q9LSK9|Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.8e-10 Identity = 42/113 (37.17%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of Carg03021 vs. TrEMBL
Match: tr|A0A1S3CQS4|A0A1S3CQS4_CUCME (uncharacterized protein At5g65660-like OS=Cucumis melo OX=3656 GN=LOC103503633 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.7e-43 Identity = 94/132 (71.21%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of Carg03021 vs. TrEMBL
Match: tr|A0A0A0LE40|A0A0A0LE40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893400 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 69/99 (69.70%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of Carg03021 vs. TrEMBL
Match: tr|U5GPZ9|U5GPZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G108100v3 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.5e-17 Identity = 57/110 (51.82%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Carg03021 vs. TrEMBL
Match: tr|A0A2P2PJZ3|A0A2P2PJZ3_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.0e-15 Identity = 55/119 (46.22%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Carg03021 vs. TrEMBL
Match: tr|A0A2C9VXN7|A0A2C9VXN7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G187200 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.0e-15 Identity = 53/119 (44.54%), Postives = 66/119 (55.46%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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