Cucsa.312200 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTGGGAGTGGAAATGAAGAAAAGAAATTGAAATGAGAGATAGAGAAATGGAGTATGATAATCGCGAAGCACAGGATCCGGCCTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTGTTAACGTTTTtGTTTTGTATGTGTTGTTTCTTTTGCTGTTGTCTTCACTGGGAGAAGCTCCGATCCTTTCTTGGCTGCCCCGATCATCTCCACCACCACCATCCTCCCATTCCCCAGCCCCAATCCCCCGCCCCcGATAAaGTTTCGCCTATTCACTCGGTGCGTCCTTTTCTTCATTTCTTCATTATTTTAAATACCATAATCCAATTTGTTTTCTTATATATACGTTTAACTAATCTTTCCTTCTTCGTCTATTATTCTCTTAACAACCAGAAGATATGGAAGGAGAATCGGCCGCAAAGCGTATCCGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCGTGTCCGGCGTTGGTGGAAATTGTAGTACAAAAACCTTCGCAAAGTATTTCAGATAATCCTTAATTATTCTCTGTAGCCTTCCCTCTTTAATTAATTAAATACTGCTTTTTTTTTtCTTCTTTTTAATTATAAGGTTTTTGTGCATATATATTATATTACAATATATAGATGTGCATTTGAATATTCCTTTGGAA GGTTGGGAGTGGAAATGAAGAAAAGAAATTGAAATGAGAGATAGAGAAATGGAGTATGATAATCGCGAAGCACAGGATCCGGCCTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTGTTAACGTTTTTGTTTTGTATGTGTTGTTTCTTTTGCTGTTGTCTTCACTGGGAGAAGCTCCGATCCTTTCTTGGCTGCCCCGATCATCTCCACCACCACCATCCTCCCATTCCCCAGCCCCAATCCCCCGCCCCCGATAAAGTTTCGCCTATTCACTCGATATGGAAGGAGAATCGGCCGCAAAGCGTATCCGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCGTGTCCGGCGTTGGTGGAAATTGTAGTACAAAAACCTTCGCAAAGTATTTCAGATAATCCTTAATTATTCTCTGTAGCCTTCCCTCTTTAATTAATTAAATACTGCTTTTTTTTTTCTTCTTTTTAATTATAAGGTTTTTGTGCATATATATTATATTACAATATATAGATGTGCATTTGAATATTCCTTTGGAA ATGAGAGATAGAGAAATGGAGTATGATAATCGCGAAGCACAGGATCCGGCCTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTGTTAACGTTTTtGTTTTGTATGTGTTGTTTCTTTTGCTGTTGTCTTCACTGGGAGAAGCTCCGATCCTTTCTTGGCTGCCCCGATCATCTCCACCACCACCATCCTCCCATTCCCCAGCCCCAATCCCCCGCCCCcGATAAaGTTTCGCCTATTCACTCGATATGGAAGGAGAATCGGCCGCAAAGCGTATCCGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCGTGTCCGGCGTTGGTGGAAATTGTAGTACAAAAACCTTCGCAAAGTATTTCAGATAATCCTTAA MRDREMEYDNREAQDPASLSFPVGLVLLLTFLFCMCCFFCCCLHWEKLRSFLGCPDHLHHHHPPIPQPQSPAPDKVSPIHSIWKENRPQSVSVLMPGDEVPRFIAMACPALVEIVVQKPSQSISDNP*
BLAST of Cucsa.312200 vs. Swiss-Prot
Match: Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 44/116 (37.93%), Postives = 56/116 (48.28%), Query Frame = 1
BLAST of Cucsa.312200 vs. TrEMBL
Match: A0A0A0LE40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G893400 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-51 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.312200 vs. TrEMBL
Match: V7AVS6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G145900g PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Cucsa.312200 vs. TrEMBL
Match: U5GPZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s10890g PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.9e-19 Identity = 55/108 (50.93%), Postives = 65/108 (60.19%), Query Frame = 1
BLAST of Cucsa.312200 vs. TrEMBL
Match: A0A0L9UFX4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g201800 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17 Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of Cucsa.312200 vs. TrEMBL
Match: A0A0S3RCH2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G108200 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17 Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of Cucsa.312200 vs. TAIR10
Match: AT5G65660.1 (AT5G65660.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 67.4 bits (163), Expect = 7.3e-12 Identity = 44/116 (37.93%), Postives = 56/116 (48.28%), Query Frame = 1
BLAST of Cucsa.312200 vs. NCBI nr
Match: gi|778687646|ref|XP_011652602.1| (PREDICTED: uncharacterized protein At5g65660-like isoform X2 [Cucumis sativus]) HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Cucsa.312200 vs. NCBI nr
Match: gi|449436926|ref|XP_004136243.1| (PREDICTED: uncharacterized protein At5g65660-like isoform X1 [Cucumis sativus]) HSP 1 Score: 273.5 bits (698), Expect = 1.9e-70 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of Cucsa.312200 vs. NCBI nr
Match: gi|659132273|ref|XP_008466113.1| (PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 4.7e-61 Identity = 115/132 (87.12%), Postives = 118/132 (89.39%), Query Frame = 1
BLAST of Cucsa.312200 vs. NCBI nr
Match: gi|700205157|gb|KGN60290.1| (hypothetical protein Csa_3G893400 [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 2.0e-51 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.312200 vs. NCBI nr
Match: gi|593328486|ref|XP_007137670.1| (hypothetical protein PHAVU_009G145900g [Phaseolus vulgaris]) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-19 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |