CSPI01G10400 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G10400
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ankyrin repeat family protein
Location	Chr1 : 6555355 .. 6557109 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGGTCCAAACTTCGCAGTTTTAACTTTTCTTGTAAGTTTTTCTTTTCATATTTAGTTCTTCTTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTGTGGAGTACTCTACATGCTTTTGCAAATTGGTTTCTATAATTCAGGTAGATTTAGAAAACTATTTTATTTTGCCTAACCAACATATTGTGTCACAAAAACATAGTAGCTCTTCTGATCTATTATTTTTCCAAAAAAAGAAATAAAATCTACATGTTCTACCATCGGAAAGATATTTGAAGAATCTACATAAGTCTTTAGATCTACAAATTTTACATTGTTAAAATATTTTCAGATATTGTTTTTATGATAGTTACAAACCATAGAAACTATAACCTTACCCAACCATAAAAGTAGACCACTTCACGTTACAACTTCGGCTTTAAATGTCTGTTTTCGAATTGACATCAGATACTTATAATGAGGAATTACACACTGCATGGTATGATGTGTCATCGTAGGTACAATGTTGGATGATCTATGATGACGGTCACGTTAAACTTCCCTCAAAACTTCTGACATCATATTGATATATGAGATAGTTGTTTATGATGATGGTTTCGAACTGACATCATATCCCATGTCATCATAAGCCTATACGGTGACGAGTTTGTCTTCATGCCATCAAAATTGTTGTAGTTTTATTTCTGTCACATGGTGATAAACTCCAATGAAATTTTTGGTGCAACTTTCACATACTTTGACTCAAACAAAAATGTTATTTGCATATAGATATAAATTTGAACACGTACCTTTTACACTTCACGCTTTTCTCAATTACTAGCTATTAGTGTTGAATTGAAGTGTTGAGTCCTCAAGTGAAACACACCCTTCCAACTGCGATCCGCCAAATCTTCTTCAGCATATAATAATTTAATGATAATAATAAATAAGATAACAAGTTGTTTGTTTATTAGGGAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA

mRNA sequence

ATGCCGTTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGGTCCAAACTTCGCAGTTTTAACTTTTCTTGGAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA

Coding sequence (CDS)

ATGCCGTTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGGTCCAAACTTCGCAGTTTTAACTTTTCTTGGAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA

Homology

[Close]

BLAST of CSPI01G10400 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.1e-141
Identity = 267/278 (96.04%), Postives = 267/278 (96.04%), Query Frame = 1


Query: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60
           MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE
Sbjct: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60

Query: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSKLRSFNFSWRSIRVDDNRSLRAKMHQAALKG 120
           QGDEENQHQLVIGSRTPEPPKNDMSWARS           IRVDDNRSLRAKMHQAALKG
Sbjct: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARS-----------IRVDDNRSLRAKMHQAALKG 120

Query: 121 DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN 180
           DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN
Sbjct: 121 DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN 180

Query: 181 TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG 240
           TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG
Sbjct: 181 TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG 240

Query: 241 LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN 279
           LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN
Sbjct: 241 LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN 267

[Close]

BLAST of CSPI01G10400 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-40
Identity = 122/258 (47.29%), Postives = 159/258 (61.63%), Query Frame = 1


Query: 22  HDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGD--EENQHQLVIGSRTPEP 81
           H P +  W E +TG  SD     HGI    ++  G +  Q +  EE    ++ G      
Sbjct: 7   HRPSS-NWPE-MTGFSSDDH---HGIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDDKTSH 66

Query: 82  PKNDMSWARSKLRSFNFSWRSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMV 141
            K  + WAR+KL SFN   R+ R  D   +  ++ +AA +GDW+ A++ME  + G L+ V
Sbjct: 67  HKMGIKWARNKLHSFNIHSRNRREHD--PIHIQLCEAATRGDWKAAEEMEKKNKGILSNV 126

Query: 142 IS-ERSETALHIATRVKRASFVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKL 201
           IS +R ETALHIATR  +A+FVEKL+E +L   +L +KN YGNTALCIAA SGAV IAKL
Sbjct: 127 ISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKL 186

Query: 202 LVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAIS 261
           +V K+  L L RGS NATPVLIAARYKH  MVS+LL      V  +   EQMELLL AI+
Sbjct: 187 MVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIA 246

Query: 262 ADYYGNSKFSSFIITTFL 274
           +D+YG      F I+T+L
Sbjct: 247 SDHYG----LLFKISTYL 253

[Close]

BLAST of CSPI01G10400 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 99/235 (42.13%), Postives = 139/235 (59.15%), Query Frame = 1


Query: 29  WSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGDEENQHQLVIGSRTPEPPKNDMSWAR 88
           W E+      D     HGI    ++  G +     +E+Q Q ++G    +  ++ M   R
Sbjct: 12  WLETTGFSSGDHH---HGIDVGGDYYGGSS-SMNVKEDQDQPMMGGDDDKTSQHKMGNRR 71

Query: 89  SKLRSFNFSWRSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS-ERSETA 148
                           ++ S+  ++ +AA +GDW+ A+++E    G L+ VIS +R ETA
Sbjct: 72  R---------------EHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETA 131

Query: 149 LHIATRVKRASFVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALP 208
           LHIATR  +A+FVEKL++ +L + +L +KN YGNTALCIAA SGAV IA+L+  K+  L 
Sbjct: 132 LHIATRFNKAAFVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLV 191

Query: 209 LIRGSGNATPVLIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAISADYY 260
           L RGS NATPVLIAARYKH  MVS+LL      V  +   EQMELLL AI++D+Y
Sbjct: 192 LTRGSANATPVLIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHY 227

[Close]

BLAST of CSPI01G10400 vs. TrEMBL
Match: A0A068USI7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033381001 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 106 NRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVE 165
           N ++   ++QAALKGDWE AK     +PGALT  I++  E ALHIA   K+  FVE+LVE
Sbjct: 96  NLTIYVPLYQAALKGDWERAKAFMTRYPGALTATITKGWERALHIAAGAKQVKFVEELVE 155

Query: 166 RLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKH 225
            +D  ELA++NK+GNTALC AAASG   IA+L+V K   LP++RGS   TP+ +AA   +
Sbjct: 156 LMDPPELAAQNKFGNTALCFAAASGITRIAELMVAKNNELPMVRGSKGVTPLHMAALLGY 215

Query: 226 KDMVSYLLSQTPVYGLAREEQMELLLGAISADYY 260
           +DMV YL+S T    L +E+ + L++  IS D Y
Sbjct: 216 RDMVWYLVSVTDPQCLTKEDYVSLIIATISTDLY 249

[Close]

BLAST of CSPI01G10400 vs. TrEMBL
Match: A0A0A0KNG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.0e-30
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 1


Query: 105 DNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLV 164
           +N   +  ++Q+AL+G+WE A+ + M     L+  I+   E ALHIA   K   FV+ LV
Sbjct: 35  ENVEEKINLYQSALEGNWETAEYILMKKRSLLSASITRDKERALHIAAGAKHTDFVKNLV 94

Query: 165 ERLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYK 224
           +++++ E+A KN++GNTALC AAASG V IA+L+V K K LPLIRG G+ TP+ +A  YK
Sbjct: 95  KQMNKEEIALKNRHGNTALCFAAASGVVKIAELMVNKNKDLPLIRGFGDVTPLFMAVSYK 154

Query: 225 HKDMVSYLLSQTPVYGLAREEQMELLLGAISADYYGNSKFSSFI 269
            K M  YLLS T +  L  +EQ+ELL+  I +D++G+ + SS I
Sbjct: 155 CKPMALYLLSVTQLIHLTSQEQIELLIATIYSDFFGSGEDSSII 198

[Close]

BLAST of CSPI01G10400 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-28
Identity = 78/199 (39.20%), Postives = 107/199 (53.77%), Query Frame = 1


Query: 74  SRTPEPPKNDM---------SWARSKLRSFNFSWRSIRVDDN-RSLRAKMHQAALKGDWE 133
           +++ EPPK D+         S         +   R+   DD  R+   +++QAALKGDW+
Sbjct: 42  NKSKEPPKGDIIVEVGETCRSCPNKHHSPLHNVQRNFSCDDKLRAKGVQLYQAALKGDWK 101

Query: 134 GAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTAL 193
            A  + +     +   I+ +SET LHIA   K   FV  L+  L+ ++LA +N  GNTAL
Sbjct: 102 AANGIIIEQKYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESNDLALRNVDGNTAL 161

Query: 194 CIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAR 253
           C AAASG V IAK+L+ K K LP+IRG G  TP+ +AA + H +MV YL   T       
Sbjct: 162 CFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKYLYKNTRFREFND 221

Query: 254 EEQMELLLGAISADYYGNS 263
           EE + L    ISAD Y  S
Sbjct: 222 EEFVNLFHAVISADIYVRS 240

[Close]

BLAST of CSPI01G10400 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 59/151 (39.07%), Postives = 81/151 (53.64%), Query Frame = 1


Query: 110 RAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDE 169
           R  M++A L GDW+ A  +       +   I+  SE ALHIA   K   FV  L+  +D 
Sbjct: 51  RNLMYKAVLTGDWKTASTLISRKECNVVEQITGNSEIALHIAVAAKHKDFVRNLLREMDP 110

Query: 170 HELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMV 229
            +L+ KNK GNT L  AAA G +  A++L+   + LP I      TP+ IAA Y H +MV
Sbjct: 111 PDLSLKNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMV 170

Query: 230 SYLLSQTPVYGLAREEQMELLLGAISADYYG 261
            YL S+T +  L  ++ + L    ISAD YG
Sbjct: 171 QYLFSKTSIKDLNDQQYLNLFHTMISADIYG 201

[Close]

BLAST of CSPI01G10400 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13
Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 1


Query: 120 GDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHE--LASKNK 179
           G+ E  K     +P ALT +++   +T +H A        VE+++ R+ + E  L  KN 
Sbjct: 60  GELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKND 119

Query: 180 YGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP 239
            G TAL  AA  G V IA+ LV K   L  +R +    P+++A+ Y HK +V YL S TP
Sbjct: 120 NGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVASLYGHKHLVQYLYSHTP 179

Query: 240 VYGL 242
           +  L
Sbjct: 180 LSDL 183

[Close]

BLAST of CSPI01G10400 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-08
Identity = 52/198 (26.26%), Postives = 85/198 (42.93%), Query Frame = 1


Query: 70  LVIGSRTPEPPKNDMSWARSKLRSFNFSWRSI-----RVDDNRSLRAKMHQAALKGDWEG 129
           L + S     P  ++    +    FN   R+      RV +      +++Q   +G  E 
Sbjct: 31  LQVSSEESSSPIKEVPEEEAPCDQFNLQIRTASQLHGRVTNEYYEYIQLNQGISQGRVEA 90

Query: 130 AKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELA---SKNKYGNT 189
            K      P A+   I+   ET L  A        V+ L+ R+   ++    S+N + NT
Sbjct: 91  VKDFLNRRPDAVDKYINPY-ETPLLKACAYGNPEIVKLLLRRMTPEQMLPKMSQNNFYNT 150

Query: 190 ALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGL 249
            L + A SG + IA+ LV K   L  I G+    PV++A      +M  YL ++TPV  L
Sbjct: 151 PLTVVAVSGNMEIAEALVAKNPKLLEIPGNNGEIPVVVAVENTQMEMARYLYNRTPVQVL 210

Query: 250 AREEQMELLLGAISADYY 260
             ++    +L  ++A YY
Sbjct: 211 LEKDGFHGILLFLNAIYY 227

[Close]

BLAST of CSPI01G10400 vs. TAIR10
Match: AT5G04680.1 (AT5G04680.1 Ankyrin repeat family protein)

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06
Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 1


Query: 112 KMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHE 171
           ++ Q   +G  E  K     HP A+   I+   ET L  A    +   V++L+ R+   +
Sbjct: 70  QLSQGISQGRVEVVKDFLNDHPDAVDEWIN-LYETPLLKACACGKPEIVKELLWRMTPEQ 129

Query: 172 LA---SKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDM 231
           +    S+N   +TAL + A SG + IA+ LV K   L  I G     PV++A      +M
Sbjct: 130 MLPKMSQNVSYHTALTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEM 189

Query: 232 VSYLLSQTPVYGLAREEQMELLLGAISADYY 260
             YL ++TPV  L  E+     L  ++A +Y
Sbjct: 190 ARYLYTRTPVQVLLAEDGYHGTLLFLNAIFY 219

[Close]

BLAST of CSPI01G10400 vs. NCBI nr
Match: gi|700209401|gb|KGN64497.1| (hypothetical protein Csa_1G059760 [Cucumis sativus])

HSP 1 Score: 509.2 bits (1310), Expect = 4.5e-141
Identity = 267/278 (96.04%), Postives = 267/278 (96.04%), Query Frame = 1


Query: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60
           MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE
Sbjct: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60

Query: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSKLRSFNFSWRSIRVDDNRSLRAKMHQAALKG 120
           QGDEENQHQLVIGSRTPEPPKNDMSWARS           IRVDDNRSLRAKMHQAALKG
Sbjct: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARS-----------IRVDDNRSLRAKMHQAALKG 120

Query: 121 DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN 180
           DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN
Sbjct: 121 DWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGN 180

Query: 181 TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG 240
           TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG
Sbjct: 181 TALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYG 240

Query: 241 LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN 279
           LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN
Sbjct: 241 LAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN 267

[Close]

BLAST of CSPI01G10400 vs. NCBI nr
Match: gi|778664851|ref|XP_011648416.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 113 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 172
           MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL
Sbjct: 1   MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 60

Query: 173 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 232
           ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 233 LSQTPVYGLAREEQMELLLGAISADYY 260
           LSQTPVYGLAREEQMELLLGAISADYY
Sbjct: 121 LSQTPVYGLAREEQMELLLGAISADYY 147

[Close]

BLAST of CSPI01G10400 vs. NCBI nr
Match: gi|659067703|ref|XP_008440858.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.5e-67
Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 113 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 172
           MHQAALKGDW+ AKQMEMMHPGALTMVISERSETALHIATRVKRA FVEKLVERLDEH+L
Sbjct: 1   MHQAALKGDWKSAKQMEMMHPGALTMVISERSETALHIATRVKRAVFVEKLVERLDEHDL 60

Query: 173 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 232
           ASKNKYGNTALCIAAASGAV IAKLLV+KYKAL LIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVDIAKLLVLKYKALTLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 233 LSQTPVYGLAREEQMELLLGAISADYY 260
           LS+TPVYGLA +EQMELLLGAISADYY
Sbjct: 121 LSKTPVYGLASQEQMELLLGAISADYY 147

[Close]

BLAST of CSPI01G10400 vs. NCBI nr
Match: gi|659067701|ref|XP_008440848.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.5e-67
Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 113 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 172
           MHQAALKGDW+ AKQMEMMHPGALTMVISERSETALHIATRVKRA FVEKLVERLDEH+L
Sbjct: 1   MHQAALKGDWKSAKQMEMMHPGALTMVISERSETALHIATRVKRAVFVEKLVERLDEHDL 60

Query: 173 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 232
           ASKNKYGNTALCIAAASGAV IAKLLV+KYKAL LIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVDIAKLLVLKYKALTLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 233 LSQTPVYGLAREEQMELLLGAISADYY 260
           LS+TPVYGLA +EQMELLLGAISADYY
Sbjct: 121 LSKTPVYGLASQEQMELLLGAISADYY 147

[Close]

BLAST of CSPI01G10400 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo])

HSP 1 Score: 173.7 bits (439), Expect = 4.5e-40
Identity = 122/258 (47.29%), Postives = 159/258 (61.63%), Query Frame = 1


Query: 22  HDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGD--EENQHQLVIGSRTPEP 81
           H P +  W E +TG  SD     HGI    ++  G +  Q +  EE    ++ G      
Sbjct: 7   HRPSS-NWPE-MTGFSSDDH---HGIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDDKTSH 66

Query: 82  PKNDMSWARSKLRSFNFSWRSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMV 141
            K  + WAR+KL SFN   R+ R  D   +  ++ +AA +GDW+ A++ME  + G L+ V
Sbjct: 67  HKMGIKWARNKLHSFNIHSRNRREHD--PIHIQLCEAATRGDWKAAEEMEKKNKGILSNV 126

Query: 142 IS-ERSETALHIATRVKRASFVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKL 201
           IS +R ETALHIATR  +A+FVEKL+E +L   +L +KN YGNTALCIAA SGAV IAKL
Sbjct: 127 ISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKL 186

Query: 202 LVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAIS 261
           +V K+  L L RGS NATPVLIAARYKH  MVS+LL      V  +   EQMELLL AI+
Sbjct: 187 MVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIA 246

Query: 262 ADYYGNSKFSSFIITTFL 274
           +D+YG      F I+T+L
Sbjct: 247 SDHYG----LLFKISTYL 253

The following BLAST results are available for this feature:

BLAST of CSPI01G10400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G10400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUR7_CUCSA	3.1e-141	96.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1	[more]
E5GC67_CUCME	3.1e-40	47.29	Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LUS0_CUCSA	1.0e-30	42.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1	[more]
A0A068USI7_COFCA	1.0e-30	49.35	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033381001 PE=4 SV=1	[more]
A0A0A0KNG9_CUCSA	5.0e-30	45.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1	[more]

BLAST of CSPI01G10400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	3.2e-28	39.20	Ankyrin repeat family protein	[more]
AT3G54070.1	1.1e-20	39.07	Ankyrin repeat family protein	[more]
AT3G18670.1	6.5e-13	35.48	Ankyrin repeat family protein	[more]
AT5G04690.1	4.8e-08	26.26	Ankyrin repeat family protein	[more]
AT5G04680.1	5.9e-06	29.80	Ankyrin repeat family protein	[more]

BLAST of CSPI01G10400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209401\|gb\|KGN64497.1\|	4.5e-141	96.04	hypothetical protein Csa_1G059760 [Cucumis sativus]	[more]
gi\|778664851\|ref\|XP_011648416.1\|	4.0e-73	100.00	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]	[more]
gi\|659067703\|ref\|XP_008440858.1\|	1.5e-67	93.20	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis ...	[more]
gi\|659067701\|ref\|XP_008440848.1\|	1.5e-67	93.20	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ...	[more]
gi\|307136229\|gb\|ADN34066.1\|	4.5e-40	47.29	ankyrin repeat family protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G10400.1	CSPI01G10400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 212..241 score: 150.0coord: 178..207 score: 4.7coord: 143..172 score: 1
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 108..247 score: 1.1
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 113..201 score: 1.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 108..234 score: 14
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 103..234 score: 1.1
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 113..259 score: 6.1
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 113..259 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G10400	Cla019363	Watermelon (97103) v1	cpiwmB010
CSPI01G10400	Csa1G059760	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G10400	ClCG03G004550	Watermelon (Charleston Gray)	cpiwcgB038
CSPI01G10400	Lsi02G005780	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G10400	CsaV3_1G010570	Cucumber (Chinese Long) v3	cpicucB009
CSPI01G10400	CsaV3_1G010510	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G10400	Cla97C03G055710	Watermelon (97103) v2	cpiwmbB032
CSPI01G10400	Cucsa.085610	Cucumber (Gy14) v1	cgycpiB090
CSPI01G10400	CmaCh13G007540	Cucurbita maxima (Rimu)	cmacpiB219
CSPI01G10400	CmoCh13G007840	Cucurbita moschata (Rifu)	cmocpiB205
CSPI01G10400	CsGy1G010390	Cucumber (Gy14) v2	cgybcpiB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G10400	Cucurbita moschata (Rifu)	cmocpiB383
CSPI01G10400	Cucurbita moschata (Rifu)	cmocpiB648
CSPI01G10400	Cucurbita moschata (Rifu)	cmocpiB845
CSPI01G10400	Cucumber (Chinese Long) v2	cpicuB013
CSPI01G10400	Cucumber (Chinese Long) v2	cpicuB044
CSPI01G10400	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G10400	Melon (DHL92) v3.5.1	cpimeB036
CSPI01G10400	Melon (DHL92) v3.5.1	cpimeB086
CSPI01G10400	Watermelon (Charleston Gray)	cpiwcgB016
CSPI01G10400	Watermelon (97103) v1	cpiwmB043
CSPI01G10400	Cucurbita pepo (Zucchini)	cpecpiB050
CSPI01G10400	Cucurbita pepo (Zucchini)	cpecpiB474
CSPI01G10400	Cucurbita pepo (Zucchini)	cpecpiB506
CSPI01G10400	Bottle gourd (USVL1VR-Ls)	cpilsiB018
CSPI01G10400	Bottle gourd (USVL1VR-Ls)	cpilsiB030
CSPI01G10400	Melon (DHL92) v3.6.1	cpimedB020
CSPI01G10400	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G10400	Melon (DHL92) v3.6.1	cpimedB076
CSPI01G10400	Cucumber (Gy14) v2	cgybcpiB247
CSPI01G10400	Silver-seed gourd	carcpiB0531
CSPI01G10400	Silver-seed gourd	carcpiB0670
CSPI01G10400	Silver-seed gourd	carcpiB0968
CSPI01G10400	Silver-seed gourd	carcpiB1044
CSPI01G10400	Cucumber (Chinese Long) v3	cpicucB010
CSPI01G10400	Cucumber (Chinese Long) v3	cpicucB017
CSPI01G10400	Cucumber (Chinese Long) v3	cpicucB051
CSPI01G10400	Watermelon (97103) v2	cpiwmbB001
CSPI01G10400	Watermelon (97103) v2	cpiwmbB041
CSPI01G10400	Wax gourd	cpiwgoB033
CSPI01G10400	Wax gourd	cpiwgoB047
CSPI01G10400	Wild cucumber (PI 183967)	cpicpiB038
CSPI01G10400	Cucurbita pepo (Zucchini)	cpecpiB025
CSPI01G10400	Cucumber (Gy14) v1	cgycpiB016
CSPI01G10400	Cucurbita maxima (Rimu)	cmacpiB401
CSPI01G10400	Cucurbita maxima (Rimu)	cmacpiB656
CSPI01G10400	Cucurbita maxima (Rimu)	cmacpiB865