Csa1G059760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G059760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ankyrin repeat family protein; contains IPR020683 (Ankyrin repeat-containing domain)
Location	Chr1 : 6511698 .. 6513460 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGGTTCCAAACTTCGCAGTTTTAACTTTTCTTGTAAGTTTTTCTTTTCATATTTAGTTCTTCTTTTTTTCTTTTTTCTTTTTTTTTGTGGAGTACTCTACATGCTTTTGCAAATTGGTTTCTATAATTCAGGTAGATTTAGAAAACTATTTTATTTTGCCTAACCAACATATTGTGTCACAAAAACATAGTAGCTCTTCTGATCTATTATTTTTCCAAAAAAAGAAATAAAATCTACATGTTCTACCATCGGAAAGATATTTGAAGAATCTACATAAGTCTTTAGATCTACAAATTTGACATTGTTAAAATATTTTCAGATATTGTTTTTATGATAGTTACAAACCATAGAAACTATAACCTTACCCAACCATAAAAGTAGACCACTTCACGTTACAACTTCGGCTTTAAATGTCTGTTTTCGAATTGACATCAGATACTTATAATGAGGAATTACACACTGCATGGTATGATGTGTCATCGTAGGTACAATGTTGGATGATCTATGATGACGGTCACGTTAAACTTCCCTCAAAACTTCTGACATCATATTGATATATGAGATAGTTGTTTATGATGATGGTTTCGAACTGACATCATATCCCATGTCATCATAAGCCTATACGGTGACGAGTTTGTCTTCATGCCATCAAAATTGTTGTAGTTTTATTTCTGTCACATGGTGATAAACTCCAATGAAATTTTTGGTGCAACTTTCACATACTTTGACTCAAACAAAAATGTTATTTGCATATAGATATAAATTTGAACACGTACCTTTTACACTTCACGCTTTTCTCAATTACTAGCTATTAGTGTTGAATTGAAGTGTTGAGTCCTCAAGTGAAACACACCCTTCCAACTGCGATCCGCCAAATCTTCTTCAGCATATAATAATTTAATGATAATAATAAATAAGATAACAAGTTGTTTGTTTATTAGGGAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAAATACATATAGGATTGT

mRNA sequence

ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA

Coding sequence (CDS)

ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA

Protein sequence

MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN*

Homology

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BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_MOUSE (Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 52/166 (31.33%), Postives = 76/166 (45.78%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           +H AA  G      Q+  MH GA     + R ETALH+A R  +A  V  LV+  D  ++
Sbjct: 420 IHVAAFMGHVNIVSQL--MHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ--DGAQV 479

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
            +K K   T L I+A  G   I + L ++  A P    +   TP+ +AAR  H+D+ ++L
Sbjct: 480 EAKAKDDQTPLHISARLGKADIVQQL-LQQGASPNAATTSGYTPLHLAAREGHEDVAAFL 539

Query: 222 LSQ------------TPVYGLAREEQME----LLLGAISADYYGNS 252
           L              TP++  A+  ++E    LL  + S D  G S
Sbjct: 540 LDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKS 580

[Close]

BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_RAT (Ankyrin-3 OS=Rattus norvegicus GN=Ank3 PE=1 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           +H AA  G      Q+  MH GA     + R ETALH+A R  +A  V  LV+  D  ++
Sbjct: 445 IHVAAFMGHVNIVSQL--MHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ--DGAQV 504

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
            +K K   T L I+A  G   I + L ++  A P    +   TP+ ++AR  H+D+ ++L
Sbjct: 505 EAKAKDDQTPLHISARLGKADIVQQL-LQQGASPNAATTSGYTPLHLSAREGHEDVAAFL 564

Query: 222 LSQ------------TPVYGLAREEQME----LLLGAISADYYGNS 252
           L              TP++  A+  ++E    LL  + S D  G S
Sbjct: 565 LDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKS 605

[Close]

BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06
Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           +H AA  G      Q+  MH GA     + R ETALH+A R  +A  V  LV+  D  ++
Sbjct: 437 IHVAAFMGHVNIVSQL--MHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ--DGAQV 496

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
            +K K   T L I+A  G   I + L ++  A P    +   TP+ ++AR  H+D+ ++L
Sbjct: 497 EAKAKDDQTPLHISARLGKADIVQQL-LQQGASPNAATTSGYTPLHLSAREGHEDVAAFL 556

Query: 222 LSQ------------TPVYGLAREEQME----LLLGAISADYYGNS 252
           L              TP++  A+  ++E    LL  + S D  G S
Sbjct: 557 LDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKS 597

[Close]

BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 8.7e-149
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60
           MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE
Sbjct: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60

Query: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM 120
           QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM
Sbjct: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM 120

Query: 121 HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA 180
           HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA
Sbjct: 121 HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA 180

Query: 181 VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL 240
           VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL
Sbjct: 181 VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL 240

Query: 241 GAISADYYGNSKFSSFIITTFLSVNAN 268
           GAISADYYGNSKFSSFIITTFLSVNAN
Sbjct: 241 GAISADYYGNSKFSSFIITTFLSVNAN 267

[Close]

BLAST of Csa1G059760 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.7e-39
Identity = 116/256 (45.31%), Postives = 153/256 (59.77%), Query Frame = 1


Query: 22  HDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGD--EENQHQLVIGSRTPEP 81
           H P +  W E +TG  SD     HGI    ++  G +  Q +  EE    ++ G      
Sbjct: 7   HRPSS-NWPE-MTGFSSDDH---HGIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDDKTSH 66

Query: 82  PKNDMSWARS------IRVDDNRS---LRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS 141
            K  + WAR+      I   + R    +  ++ +AA +GDW+ A++ME  + G L+ VIS
Sbjct: 67  HKMGIKWARNKLHSFNIHSRNRREHDPIHIQLCEAATRGDWKAAEEMEKKNKGILSNVIS 126

Query: 142 -ERSETALHIATRVKRASFVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKLLV 201
            +R ETALHIATR  +A+FVEKL+E +L   +L +KN YGNTALCIAA SGAV IAKL+V
Sbjct: 127 KDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKLMV 186

Query: 202 IKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAISAD 261
            K+  L L RGS NATPVLIAARYKH  MVS+LL      V  +   EQMELLL AI++D
Sbjct: 187 RKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIASD 246

Query: 262 YYGNSKFSSFIITTFL 263
           +YG      F I+T+L
Sbjct: 247 HYG----LLFKISTYL 253

[Close]

BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-35
Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = 1


Query: 29  WSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGDEENQHQLVIGSRTPEPPKNDMSWAR 88
           W E+      D     HGI    ++  G +     +E+Q Q ++G    +  ++ M   R
Sbjct: 12  WLETTGFSSGDHH---HGIDVGGDYYGGSS-SMNVKEDQDQPMMGGDDDKTSQHKMGNRR 71

Query: 89  SIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS-ERSETALHIATRVKRAS 148
                ++ S+  ++ +AA +GDW+ A+++E    G L+ VIS +R ETALHIATR  +A+
Sbjct: 72  R----EHDSIHIQLCEAATRGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAA 131

Query: 149 FVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPV 208
           FVEKL++ +L + +L +KN YGNTALCIAA SGAV IA+L+  K+  L L RGS NATPV
Sbjct: 132 FVEKLIKYKLTQTDLEAKNIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPV 191

Query: 209 LIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAISADYY 249
           LIAARYKH  MVS+LL      V  +   EQMELLL AI++D+Y
Sbjct: 192 LIAARYKHSHMVSFLLKSMNKIVQKMEISEQMELLLSAIASDHY 227

[Close]

BLAST of Csa1G059760 vs. TrEMBL
Match: A0A068USI7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033381001 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.3e-32
Identity = 94/251 (37.45%), Postives = 132/251 (52.59%), Query Frame = 1


Query: 8   PSSSSSPNKPTLD----------PHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGE 67
           P S S P   T D          P    +V+ S +V  GD      Q+G+  D+      
Sbjct: 20  PESFSGPGSGTSDQATGYATATIPQHVVSVQLSYNVPVGDQSDHIIQNGMEHDNR----- 79

Query: 68  TPEQGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQM 127
                         + ++   PP    +   S +   N ++   ++QAALKGDWE AK  
Sbjct: 80  -------------TVSAQMLHPPYCREASTPSAK---NLTIYVPLYQAALKGDWERAKAF 139

Query: 128 EMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAA 187
              +PGALT  I++  E ALHIA   K+  FVE+LVE +D  ELA++NK+GNTALC AAA
Sbjct: 140 MTRYPGALTATITKGWERALHIAAGAKQVKFVEELVELMDPPELAAQNKFGNTALCFAAA 199

Query: 188 SGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQME 247
           SG   IA+L+V K   LP++RGS   TP+ +AA   ++DMV YL+S T    L +E+ + 
Sbjct: 200 SGITRIAELMVAKNNELPMVRGSKGVTPLHMAALLGYRDMVWYLVSVTDPQCLTKEDYVS 249

Query: 248 LLLGAISADYY 249
           L++  IS D Y
Sbjct: 260 LIIATISTDLY 249

[Close]

BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0KNG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-31
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 1


Query: 94  DNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLV 153
           +N   +  ++Q+AL+G+WE A+ + M     L+  I+   E ALHIA   K   FV+ LV
Sbjct: 35  ENVEEKINLYQSALEGNWETAEYILMKKRSLLSASITRDKERALHIAAGAKHTDFVKNLV 94

Query: 154 ERLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYK 213
           +++++ E+A KN++GNTALC AAASG V IA+L+V K K LPLIRG G+ TP+ +A  YK
Sbjct: 95  KQMNKEEIALKNRHGNTALCFAAASGVVKIAELMVNKNKDLPLIRGFGDVTPLFMAVSYK 154

Query: 214 HKDMVSYLLSQTPVYGLAREEQMELLLGAISADYYGNSKFSSFI 258
            K M  YLLS T +  L  +EQ+ELL+  I +D++G+ + SS I
Sbjct: 155 CKPMALYLLSVTQLIHLTSQEQIELLIATIYSDFFGSGEDSSII 198

[Close]

BLAST of Csa1G059760 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 1


Query: 88  RSIRVDDN-RSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRA 147
           R+   DD  R+   +++QAALKGDW+ A  + +     +   I+ +SET LHIA   K  
Sbjct: 76  RNFSCDDKLRAKGVQLYQAALKGDWKAANGIIIEQKYIIYQKITSKSETVLHIAVAAKHE 135

Query: 148 SFVEKLVERLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPV 207
            FV  L+  L+ ++LA +N  GNTALC AAASG V IAK+L+ K K LP+IRG G  TP+
Sbjct: 136 GFVRNLLGSLESNDLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPI 195

Query: 208 LIAARYKHKDMVSYLLSQTPVYGLAREEQMELLLGAISADYYGNS 252
            +AA + H +MV YL   T       EE + L    ISAD Y  S
Sbjct: 196 HMAALFGHGEMVKYLYKNTRFREFNDEEFVNLFHAVISADIYVRS 240

[Close]

BLAST of Csa1G059760 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.3e-22
Identity = 65/197 (32.99%), Postives = 98/197 (49.75%), Query Frame = 1


Query: 60  EQGDEENQHQLVI--GSRTPEPPKNDMSWARSIRVDDNRSL-----RAKMHQAALKGDWE 119
           ++G + +Q  +++  G  +   P  D S   ++    +  +     R  M++A L GDW+
Sbjct: 5   DKGKQLHQEDVIVEVGEPSGSSPNEDPSSLPNVEDHTSEDVTKPHSRNLMYKAVLTGDWK 64

Query: 120 GAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTAL 179
            A  +       +   I+  SE ALHIA   K   FV  L+  +D  +L+ KNK GNT L
Sbjct: 65  TASTLISRKECNVVEQITGNSEIALHIAVAAKHKDFVRNLLREMDPPDLSLKNKDGNTPL 124

Query: 180 CIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAR 239
             AAA G +  A++L+   + LP I      TP+ IAA Y H +MV YL S+T +  L  
Sbjct: 125 SFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQYLFSKTSIKDLND 184

Query: 240 EEQMELLLGAISADYYG 250
           ++ + L    ISAD YG
Sbjct: 185 QQYLNLFHTMISADIYG 201

[Close]

BLAST of Csa1G059760 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14
Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 1


Query: 109 GDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHE--LASKNK 168
           G+ E  K     +P ALT +++   +T +H A        VE+++ R+ + E  L  KN 
Sbjct: 60  GELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKND 119

Query: 169 YGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP 228
            G TAL  AA  G V IA+ LV K   L  +R +    P+++A+ Y HK +V YL S TP
Sbjct: 120 NGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVASLYGHKHLVQYLYSHTP 179

Query: 229 VYGL 231
           +  L
Sbjct: 180 LSDL 183

[Close]

BLAST of Csa1G059760 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-09
Identity = 44/151 (29.14%), Postives = 69/151 (45.70%), Query Frame = 1


Query: 101 KMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHE 160
           +++Q   +G  E  K      P A+   I+   ET L  A        V+ L+ R+   +
Sbjct: 78  QLNQGISQGRVEAVKDFLNRRPDAVDKYINPY-ETPLLKACAYGNPEIVKLLLRRMTPEQ 137

Query: 161 LA---SKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDM 220
           +    S+N + NT L + A SG + IA+ LV K   L  I G+    PV++A      +M
Sbjct: 138 MLPKMSQNNFYNTPLTVVAVSGNMEIAEALVAKNPKLLEIPGNNGEIPVVVAVENTQMEM 197

Query: 221 VSYLLSQTPVYGLAREEQMELLLGAISADYY 249
             YL ++TPV  L  ++    +L  ++A YY
Sbjct: 198 ARYLYNRTPVQVLLEKDGFHGILLFLNAIYY 227

[Close]

BLAST of Csa1G059760 vs. TAIR10
Match: AT5G04680.1 (AT5G04680.1 Ankyrin repeat family protein)

HSP 1 Score: 52.4 bits (124), Expect = 5.1e-07
Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 1


Query: 101 KMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHE 160
           ++ Q   +G  E  K     HP A+   I+   ET L  A    +   V++L+ R+   +
Sbjct: 70  QLSQGISQGRVEVVKDFLNDHPDAVDEWIN-LYETPLLKACACGKPEIVKELLWRMTPEQ 129

Query: 161 LA---SKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDM 220
           +    S+N   +TAL + A SG + IA+ LV K   L  I G     PV++A      +M
Sbjct: 130 MLPKMSQNVSYHTALTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEM 189

Query: 221 VSYLLSQTPVYGLAREEQMELLLGAISADYY 249
             YL ++TPV  L  E+     L  ++A +Y
Sbjct: 190 ARYLYTRTPVQVLLAEDGYHGTLLFLNAIFY 219

[Close]

BLAST of Csa1G059760 vs. NCBI nr
Match: gi|700209401|gb|KGN64497.1| (hypothetical protein Csa_1G059760 [Cucumis sativus])

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60
           MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE
Sbjct: 1   MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPE 60

Query: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM 120
           QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM
Sbjct: 61  QGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMM 120

Query: 121 HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA 180
           HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA
Sbjct: 121 HPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGA 180

Query: 181 VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL 240
           VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL
Sbjct: 181 VAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLL 240

Query: 241 GAISADYYGNSKFSSFIITTFLSVNAN 268
           GAISADYYGNSKFSSFIITTFLSVNAN
Sbjct: 241 GAISADYYGNSKFSSFIITTFLSVNAN 267

[Close]

BLAST of Csa1G059760 vs. NCBI nr
Match: gi|778664851|ref|XP_011648416.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 3.5e-74
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL
Sbjct: 1   MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 60

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
           ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 222 LSQTPVYGLAREEQMELLLGAISADYY 249
           LSQTPVYGLAREEQMELLLGAISADYY
Sbjct: 121 LSQTPVYGLAREEQMELLLGAISADYY 147

[Close]

BLAST of Csa1G059760 vs. NCBI nr
Match: gi|659067701|ref|XP_008440848.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           MHQAALKGDW+ AKQMEMMHPGALTMVISERSETALHIATRVKRA FVEKLVERLDEH+L
Sbjct: 1   MHQAALKGDWKSAKQMEMMHPGALTMVISERSETALHIATRVKRAVFVEKLVERLDEHDL 60

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
           ASKNKYGNTALCIAAASGAV IAKLLV+KYKAL LIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVDIAKLLVLKYKALTLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 222 LSQTPVYGLAREEQMELLLGAISADYY 249
           LS+TPVYGLA +EQMELLLGAISADYY
Sbjct: 121 LSKTPVYGLASQEQMELLLGAISADYY 147

[Close]

BLAST of Csa1G059760 vs. NCBI nr
Match: gi|659067703|ref|XP_008440858.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1


Query: 102 MHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHEL 161
           MHQAALKGDW+ AKQMEMMHPGALTMVISERSETALHIATRVKRA FVEKLVERLDEH+L
Sbjct: 1   MHQAALKGDWKSAKQMEMMHPGALTMVISERSETALHIATRVKRAVFVEKLVERLDEHDL 60

Query: 162 ASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYL 221
           ASKNKYGNTALCIAAASGAV IAKLLV+KYKAL LIRGSGNATPVLIAARYKHKDMVSYL
Sbjct: 61  ASKNKYGNTALCIAAASGAVDIAKLLVLKYKALTLIRGSGNATPVLIAARYKHKDMVSYL 120

Query: 222 LSQTPVYGLAREEQMELLLGAISADYY 249
           LS+TPVYGLA +EQMELLLGAISADYY
Sbjct: 121 LSKTPVYGLASQEQMELLLGAISADYY 147

[Close]

BLAST of Csa1G059760 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo])

HSP 1 Score: 169.5 bits (428), Expect = 8.1e-39
Identity = 116/256 (45.31%), Postives = 153/256 (59.77%), Query Frame = 1


Query: 22  HDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGD--EENQHQLVIGSRTPEP 81
           H P +  W E +TG  SD     HGI    ++  G +  Q +  EE    ++ G      
Sbjct: 7   HRPSS-NWPE-MTGFSSDDH---HGIEIGGDYYRGSSSAQVNVKEEEDQPMMGGDDKTSH 66

Query: 82  PKNDMSWARS------IRVDDNRS---LRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS 141
            K  + WAR+      I   + R    +  ++ +AA +GDW+ A++ME  + G L+ VIS
Sbjct: 67  HKMGIKWARNKLHSFNIHSRNRREHDPIHIQLCEAATRGDWKAAEEMEKKNKGILSNVIS 126

Query: 142 -ERSETALHIATRVKRASFVEKLVE-RLDEHELASKNKYGNTALCIAAASGAVAIAKLLV 201
            +R ETALHIATR  +A+FVEKL+E +L   +L +KN YGNTALCIAA SGAV IAKL+V
Sbjct: 127 KDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKNIYGNTALCIAATSGAVDIAKLMV 186

Query: 202 IKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTP--VYGLAREEQMELLLGAISAD 261
            K+  L L RGS NATPVLIAARYKH  MVS+LL      V  +   EQMELLL AI++D
Sbjct: 187 RKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAMDLIVQKMEISEQMELLLSAIASD 246

Query: 262 YYGNSKFSSFIITTFL 263
           +YG      F I+T+L
Sbjct: 247 HYG----LLFKISTYL 253

The following BLAST results are available for this feature:

BLAST of Csa1G059760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ANK3_MOUSE	1.8e-06	31.33	Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1	[more]
ANK3_RAT	4.1e-06	30.72	Ankyrin-3 OS=Rattus norvegicus GN=Ank3 PE=1 SV=3	[more]
ANK3_HUMAN	4.1e-06	30.72	Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3	[more]

BLAST of Csa1G059760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUR7_CUCSA	8.7e-149	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1	[more]
E5GC67_CUCME	5.7e-39	45.31	Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LUS0_CUCSA	2.2e-35	44.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1	[more]
A0A068USI7_COFCA	2.3e-32	37.45	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033381001 PE=4 SV=1	[more]
A0A0A0KNG9_CUCSA	3.3e-31	45.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1	[more]

BLAST of Csa1G059760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	2.8e-29	43.64	Ankyrin repeat family protein	[more]
AT3G54070.1	4.3e-22	32.99	Ankyrin repeat family protein	[more]
AT3G18670.1	7.4e-14	35.48	Ankyrin repeat family protein	[more]
AT5G04690.1	7.1e-09	29.14	Ankyrin repeat family protein	[more]
AT5G04680.1	5.1e-07	29.80	Ankyrin repeat family protein	[more]

BLAST of Csa1G059760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209401\|gb\|KGN64497.1\|	1.3e-148	100.00	hypothetical protein Csa_1G059760 [Cucumis sativus]	[more]
gi\|778664851\|ref\|XP_011648416.1\|	3.5e-74	100.00	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]	[more]
gi\|659067701\|ref\|XP_008440848.1\|	1.3e-68	93.20	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ...	[more]
gi\|659067703\|ref\|XP_008440858.1\|	1.3e-68	93.20	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis ...	[more]
gi\|307136229\|gb\|ADN34066.1\|	8.1e-39	45.31	ankyrin repeat family protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G059760.1	Csa1G059760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 167..196 score: 4.7coord: 201..230 score: 150.0coord: 132..161 score: 1
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 97..236 score: 9.9
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 102..190 score: 1.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 97..223 score: 14
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 95..223 score: 1.31
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 102..248 score: 6.1
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 102..248 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G059760	Cla019364	Watermelon (97103) v1	cuwmB008
Csa1G059760	MELO3C002426	Melon (DHL92) v3.5.1	cumeB024
Csa1G059760	MELO3C002441	Melon (DHL92) v3.5.1	cumeB027
Csa1G059760	ClCG03G004560	Watermelon (Charleston Gray)	cuwcgB035
Csa1G059760	Lsi02G005780	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G059760	Lsi02G005540	Bottle gourd (USVL1VR-Ls)	culsiB040
Csa1G059760	MELO3C002416.2	Melon (DHL92) v3.6.1	cumedB021
Csa1G059760	MELO3C002441.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G059760	Cla97C03G055710	Watermelon (97103) v2	cuwmbB032
Csa1G059760	CSPI01G10180	Wild cucumber (PI 183967)	cpicuB013
Csa1G059760	CSPI01G10400	Wild cucumber (PI 183967)	cpicuB000
Csa1G059760	Cucsa.085610	Cucumber (Gy14) v1	cgycuB087
Csa1G059760	CmaCh13G007540	Cucurbita maxima (Rimu)	cmacuB218
Csa1G059760	CmoCh13G007840	Cucurbita moschata (Rifu)	cmocuB203
Csa1G059760	CsGy1G010390	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G059760	Cucurbita maxima (Rimu)	cmacuB397
Csa1G059760	Cucurbita maxima (Rimu)	cmacuB649
Csa1G059760	Cucurbita maxima (Rimu)	cmacuB848
Csa1G059760	Cucurbita moschata (Rifu)	cmocuB380
Csa1G059760	Cucurbita moschata (Rifu)	cmocuB637
Csa1G059760	Cucurbita moschata (Rifu)	cmocuB835
Csa1G059760	Melon (DHL92) v3.5.1	cumeB026
Csa1G059760	Melon (DHL92) v3.5.1	cumeB083
Csa1G059760	Watermelon (Charleston Gray)	cuwcgB012
Csa1G059760	Watermelon (97103) v1	cuwmB043
Csa1G059760	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G059760	Cucurbita pepo (Zucchini)	cpecuB055
Csa1G059760	Cucurbita pepo (Zucchini)	cpecuB474
Csa1G059760	Cucurbita pepo (Zucchini)	cpecuB506
Csa1G059760	Bottle gourd (USVL1VR-Ls)	culsiB019
Csa1G059760	Cucumber (Gy14) v2	cgybcuB239
Csa1G059760	Melon (DHL92) v3.6.1	cumedB077
Csa1G059760	Silver-seed gourd	carcuB0523
Csa1G059760	Silver-seed gourd	carcuB0661
Csa1G059760	Silver-seed gourd	carcuB0945
Csa1G059760	Silver-seed gourd	carcuB1020
Csa1G059760	Watermelon (97103) v2	cuwmbB000
Csa1G059760	Wax gourd	cuwgoB033
Csa1G059760	Cucumber (Chinese Long) v2	cucuB035
Csa1G059760	Cucumber (Gy14) v1	cgycuB015