Csa1G059760 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGGTTCCAAACTTCGCAGTTTTAACTTTTCTTGTAAGTTTTTCTTTTCATATTTAGTTCTTCTTTTTTTCTTTTTTCTTTTTTTTTGTGGAGTACTCTACATGCTTTTGCAAATTGGTTTCTATAATTCAGGTAGATTTAGAAAACTATTTTATTTTGCCTAACCAACATATTGTGTCACAAAAACATAGTAGCTCTTCTGATCTATTATTTTTCCAAAAAAAGAAATAAAATCTACATGTTCTACCATCGGAAAGATATTTGAAGAATCTACATAAGTCTTTAGATCTACAAATTTGACATTGTTAAAATATTTTCAGATATTGTTTTTATGATAGTTACAAACCATAGAAACTATAACCTTACCCAACCATAAAAGTAGACCACTTCACGTTACAACTTCGGCTTTAAATGTCTGTTTTCGAATTGACATCAGATACTTATAATGAGGAATTACACACTGCATGGTATGATGTGTCATCGTAGGTACAATGTTGGATGATCTATGATGACGGTCACGTTAAACTTCCCTCAAAACTTCTGACATCATATTGATATATGAGATAGTTGTTTATGATGATGGTTTCGAACTGACATCATATCCCATGTCATCATAAGCCTATACGGTGACGAGTTTGTCTTCATGCCATCAAAATTGTTGTAGTTTTATTTCTGTCACATGGTGATAAACTCCAATGAAATTTTTGGTGCAACTTTCACATACTTTGACTCAAACAAAAATGTTATTTGCATATAGATATAAATTTGAACACGTACCTTTTACACTTCACGCTTTTCTCAATTACTAGCTATTAGTGTTGAATTGAAGTGTTGAGTCCTCAAGTGAAACACACCCTTCCAACTGCGATCCGCCAAATCTTCTTCAGCATATAATAATTTAATGATAATAATAAATAAGATAACAAGTTGTTTGTTTATTAGGGAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAAATACATATAGGATTGT ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA ATGCCATTGACTCACAAGCCACCTTCGTCTTCTTCTTCACCCAATAAGCCAACCCTTGACCCTCACGACCCCAAGGCTGTTCGATGGTCAGAGTCGGTTACCGGCGGTGATTCTGATAGCAGAAAGAAGCAGCATGGGATCCACGATGACGATGAGTTTGAAGAAGGTGAGACACCCGAGCAAGGGGATGAGGAAAATCAGCACCAACTTGTTATTGGAAGTAGAACGCCAGAACCACCCAAGAATGATATGAGTTGGGCTAGATCAATAAGAGTGGACGACAATCGTTCACTACGTGCTAAGATGCATCAAGCTGCACTAAAAGGAGACTGGGAAGGTGCAAAGCAAATGGAAATGATGCATCCAGGAGCCTTAACAATGGTGATAAGTGAAAGATCTGAAACTGCTCTTCACATAGCGACGAGAGTGAAGAGGGCCAGTTTCGTCGAGAAGTTGGTGGAACGGTTGGACGAGCATGAGTTGGCGTCGAAAAATAAATATGGAAACACAGCCCTTTGCATTGCGGCTGCATCAGGGGCTGTGGCTATTGCCAAGTTGCTGGTTATTAAATATAAAGCTTTGCCACTTATTCGTGGCTCAGGAAATGCAACTCCTGTTTTGATTGCAGCAAGATATAAGCATAAGGATATGGTTTCTTATCTTCTCTCCCAAACGCCCGTCTATGGGTTGGCTAGGGAAGAGCAAATGGAGCTGCTTCTTGGTGCTATTTCAGCTGATTATTATGGTAATTCCAAATTCTCTTCCTTCATTATCACTACTTTTTTATCCGTCAATGCTAATTAA MPLTHKPPSSSSSPNKPTLDPHDPKAVRWSESVTGGDSDSRKKQHGIHDDDEFEEGETPEQGDEENQHQLVIGSRTPEPPKNDMSWARSIRVDDNRSLRAKMHQAALKGDWEGAKQMEMMHPGALTMVISERSETALHIATRVKRASFVEKLVERLDEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLSQTPVYGLAREEQMELLLGAISADYYGNSKFSSFIITTFLSVNAN*
BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_MOUSE (Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06 Identity = 52/166 (31.33%), Postives = 76/166 (45.78%), Query Frame = 1
BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_RAT (Ankyrin-3 OS=Rattus norvegicus GN=Ank3 PE=1 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06 Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 1
BLAST of Csa1G059760 vs. Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06 Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 1
BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 8.7e-149 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G059760 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.7e-39 Identity = 116/256 (45.31%), Postives = 153/256 (59.77%), Query Frame = 1
BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.2e-35 Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = 1
BLAST of Csa1G059760 vs. TrEMBL
Match: A0A068USI7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033381001 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.3e-32 Identity = 94/251 (37.45%), Postives = 132/251 (52.59%), Query Frame = 1
BLAST of Csa1G059760 vs. TrEMBL
Match: A0A0A0KNG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.3e-31 Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 1
BLAST of Csa1G059760 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein) HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29 Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 1
BLAST of Csa1G059760 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein) HSP 1 Score: 102.4 bits (254), Expect = 4.3e-22 Identity = 65/197 (32.99%), Postives = 98/197 (49.75%), Query Frame = 1
BLAST of Csa1G059760 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein) HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14 Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 1
BLAST of Csa1G059760 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein) HSP 1 Score: 58.5 bits (140), Expect = 7.1e-09 Identity = 44/151 (29.14%), Postives = 69/151 (45.70%), Query Frame = 1
BLAST of Csa1G059760 vs. TAIR10
Match: AT5G04680.1 (AT5G04680.1 Ankyrin repeat family protein) HSP 1 Score: 52.4 bits (124), Expect = 5.1e-07 Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 1
BLAST of Csa1G059760 vs. NCBI nr
Match: gi|700209401|gb|KGN64497.1| (hypothetical protein Csa_1G059760 [Cucumis sativus]) HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Csa1G059760 vs. NCBI nr
Match: gi|778664851|ref|XP_011648416.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]) HSP 1 Score: 287.0 bits (733), Expect = 3.5e-74 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Csa1G059760 vs. NCBI nr
Match: gi|659067701|ref|XP_008440848.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo]) HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68 Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1
BLAST of Csa1G059760 vs. NCBI nr
Match: gi|659067703|ref|XP_008440858.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis melo]) HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68 Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1
BLAST of Csa1G059760 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo]) HSP 1 Score: 169.5 bits (428), Expect = 8.1e-39 Identity = 116/256 (45.31%), Postives = 153/256 (59.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |