CSPI01G00170 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G00170
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAcyl carrier protein
LocationChr1 : 103926 .. 105121 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAGTGTTTTTAAAAAGTTGGTTGAAAGAATTTGGGTAAGGAAATCGGGCATGTAGATAGGATTTGATAAAAATGGATAATATGGAGGGAGAAGCAATGTCCACCACTCATCAAAACCAGTAAAACTACTTAATCCAATCCCTTCTTCATCTTCCTATCCTCCATGTTTCTGGGGTTTTGAAGTTTATTATACAAACGTAACTACACCCTCATTATTCAGTGGTAATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGGTGTTCTTTCTATCCTATCTATCTATTGTATATACAATTCTGTAGCCTAAAATGGTTCTTTATATATCATTAATTAACTGTATGCTGCTGCTTGCAGCTTCTCAGAAGAACCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGTAATTTAACTCGAAGTGTCTCTAAACTAATTTGTGAATTTGAGTTTCAAACTAATTAAGTGTATGAACAGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTACGTCCTCTTATCCTTACTTAATTTAACTACCATTCTGTTCATTGCTTGAATATATATATGTGTGTGTGTGTCGGAATGGCCACACAGGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATATAGCTTTGCTTTTAGTATTATGTTGAAGTTGTATTATTCCAAGAGGCAGATGACAAGAGTTTGGTTGGGGTTGGGTTGAGCAAATAGGATTAGAATGTTCTTTTTTTCCTCAAATGATTTTTTTAAGCAAATTAATGTACTTCTACTCCATCAACGTAACTTGTTAGCTACAAAATTTAAAATGTAATATGAATTGTAGTGTTGTGTTGTTTTCTGTTCTCTAAACGAGGAGAGGATCGATCAGTCTATTTCATTGATTCCAGTGGGAGACGAAACTACAGTAGATAGTACTATTAGC

mRNA sequence

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAACCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAACCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA
Homology
[Close]
BLAST of CSPI01G00170 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 1 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           F V CAAKPET++KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF I
Sbjct: 48  FVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGI 107

Query: 105 NIEEDNAQNITTVQEAADLIENLVVKQ 132
           N+EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 108 NVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]
BLAST of CSPI01G00170 vs. Swiss-Prot
Match: ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.9e-27
Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +++    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
            IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNITT+QEA
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 120

Query: 121 ADLIENLVVKQ 132
           ADLIE+LV K+
Sbjct: 121 ADLIEDLVQKK 131

[Close]
BLAST of CSPI01G00170 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 60/98 (61.22%), Postives = 81/98 (82.65%), Query Frame = 1 

Query: 34  RGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVE 93
           + F +   +F  RV+C AKPET+ KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVE
Sbjct: 38  KSFFSRRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVE 97

Query: 94  IIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           I+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 98  IVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]
BLAST of CSPI01G00170 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.7e-26
Identity = 61/94 (64.89%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 38  NNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT 97
           ++ ++F  RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M 
Sbjct: 45  SSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMG 104

Query: 98  LEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 105 LEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]
BLAST of CSPI01G00170 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-25
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 1 

Query: 37  LNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIM 96
           L ++     RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M
Sbjct: 43  LRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVM 102

Query: 97  TLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
            LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 103 GLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]
BLAST of CSPI01G00170 vs. TrEMBL
Match: A0A0A0LNR6_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRR+LLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of CSPI01G00170 vs. TrEMBL
Match: E5GBM2_CUCME (Acyl carrier protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-59
Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRR+  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of CSPI01G00170 vs. TrEMBL
Match: A0A059BF77_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-31
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLG---RGFLNNNNAFHFRVSCAAKPETLD 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCAAKPET+D
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAAKPETVD 60

Query: 61  KVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 120
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 121 QEAADLIENLVVKQ 132
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 133

[Close]
BLAST of CSPI01G00170 vs. TrEMBL
Match: A0A059BDY2_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.0e-30
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLG---RGFLNNNNAFHFRVSCA-AKPETL 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCA AKPET+
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAQAKPETV 60

Query: 61  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 120
           DKVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITT
Sbjct: 61  DKVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITT 120

Query: 121 VQEAADLIENLVVKQ 132
           VQEAADLIE LV K+
Sbjct: 121 VQEAADLIEKLVQKK 134

[Close]
BLAST of CSPI01G00170 vs. TrEMBL
Match: D7TYT3_VITVI (Acyl carrier protein OS=Vitis vinifera GN=VIT_01s0244g00030 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-29
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 1 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           FRVSC+AKPET+ KVC IV+KQLALP  SELTPESKFAALGADSLDTVEI+M+LEEEF I
Sbjct: 50  FRVSCSAKPETVQKVCEIVKKQLALPAESELTPESKFAALGADSLDTVEIVMSLEEEFGI 109

Query: 105 NIEEDNAQNITTVQEAADLIENLVVK 131
           ++EE+++QNITTVQEAADLIE LV K
Sbjct: 110 SVEEESSQNITTVQEAADLIEKLVQK 135

[Close]
BLAST of CSPI01G00170 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +++    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFSINIEE 120
            IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+I++EE
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEE 120

Query: 121 DNAQNITTVQEAADLIENLVVKQ 132
            +AQNITT+QEAADLIE+LV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 143

[Close]
BLAST of CSPI01G00170 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2)

HSP 1 Score: 110.5 bits (275), Expect = 7.9e-25
Identity = 56/85 (65.88%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           VSCAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L+ ++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLFEK 134

[Close]
BLAST of CSPI01G00170 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           V CAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L++++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLLEK 134

[Close]
BLAST of CSPI01G00170 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 1 

Query: 2   ASFSATSLRFCMP-----INQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETL 61
           A FSAT+ RFC+       N     N +  LRR +  R            VSCA K ET+
Sbjct: 13  APFSATTTRFCLNKQATIFNNEKTNNLSFSLRRLMPAR----------LAVSCAVKQETV 72

Query: 62  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 121
           +KV  IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF I + E+ A+ I T
Sbjct: 73  EKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIAT 132

Query: 122 VQEAADLIENLV 129
           VQ+AA+LIE LV
Sbjct: 133 VQQAAELIEELV 134

[Close]
BLAST of CSPI01G00170 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 97.8 bits (242), Expect = 5.3e-21
Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 1 

Query: 5   SATSLRFCMP--INQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSI 64
           + T + F  P  I+   K N +  LRR++  R            VSCAAK ET++KV +I
Sbjct: 17  ATTRISFQKPALISNHGKTNLSFNLRRSIPSR---------RLSVSCAAKQETIEKVSAI 76

Query: 65  VRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD 124
           V+KQL+L    ++  E+KFA LGADSLDTVEI+M LEEEF+I + E+ AQ I TV++AA+
Sbjct: 77  VKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQAAE 133

Query: 125 LIENLV 129
           LIE L+
Sbjct: 137 LIEELI 133

[Close]
BLAST of CSPI01G00170 vs. NCBI nr
Match: gi|449440504|ref|XP_004138024.1| (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRR+LLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of CSPI01G00170 vs. NCBI nr
Match: gi|659128820|ref|XP_008464386.1| (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 2.7e-59
Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRR+  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of CSPI01G00170 vs. NCBI nr
Match: gi|702418586|ref|XP_010066441.1| (PREDICTED: acyl carrier protein 4, chloroplastic isoform X2 [Eucalyptus grandis])

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-31
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLG---RGFLNNNNAFHFRVSCAAKPETLD 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCAAKPET+D
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAAKPETVD 60

Query: 61  KVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 120
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 121 QEAADLIENLVVKQ 132
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 133

[Close]
BLAST of CSPI01G00170 vs. NCBI nr
Match: gi|702418546|ref|XP_010066440.1| (PREDICTED: acyl carrier protein 4, chloroplastic isoform X1 [Eucalyptus grandis])

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-29
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRTLLG---RGFLNNNNAFHFRVSCA-AKPETL 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCA AKPET+
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAQAKPETV 60

Query: 61  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 120
           DKVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITT
Sbjct: 61  DKVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITT 120

Query: 121 VQEAADLIENLVVKQ 132
           VQEAADLIE LV K+
Sbjct: 121 VQEAADLIEKLVQKK 134

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BLAST of CSPI01G00170 vs. NCBI nr
Match: gi|225425224|ref|XP_002267614.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Vitis vinifera])

HSP 1 Score: 136.0 bits (341), Expect = 5.0e-29
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 1 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           FRVSC+AKPET+ KVC IV+KQLALP  SELTPESKFAALGADSLDTVEI+M+LEEEF I
Sbjct: 50  FRVSCSAKPETVQKVCEIVKKQLALPAESELTPESKFAALGADSLDTVEIVMSLEEEFGI 109

Query: 105 NIEEDNAQNITTVQEAADLIENLVVK 131
           ++EE+++QNITTVQEAADLIE LV K
Sbjct: 110 SVEEESSQNITTVQEAADLIEKLVQK 135

The following BLAST results are available for this feature:
BLAST of CSPI01G00170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACP1_CASGL3.6e-2771.26Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1[more]
ACP4_ARATH7.9e-2751.91Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1[more]
ACP2_CUPLA1.8e-2661.22Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1[more]
ACP1_CUPLA6.7e-2664.89Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1[more]
ACP4_CUPLA4.4e-2564.21Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1[more]
BLAST of CSPI01G00170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNR6_CUCSA1.5e-6499.25Acyl carrier protein OS=Cucumis sativus GN=Csa_1G000670 PE=3 SV=1[more]
E5GBM2_CUCME1.9e-5992.48Acyl carrier protein OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A059BF77_EUCGR2.8e-3161.94Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1[more]
A0A059BDY2_EUCGR7.0e-3061.48Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1[more]
D7TYT3_VITVI3.5e-2980.23Acyl carrier protein OS=Vitis vinifera GN=VIT_01s0244g00030 PE=3 SV=1[more]
BLAST of CSPI01G00170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25050.22.1e-2547.55 acyl carrier protein 4[more]
AT1G54580.17.9e-2565.88 acyl carrier protein 2[more]
AT1G54630.12.3e-2464.71 acyl carrier protein 3[more]
AT5G27200.16.3e-2247.73 acyl carrier protein 5[more]
AT3G05020.15.3e-2147.62 acyl carrier protein 1[more]
BLAST of CSPI01G00170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440504|ref|XP_004138024.1|2.1e-6499.25PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus][more]
gi|659128820|ref|XP_008464386.1|2.7e-5992.48PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo][more]
gi|702418586|ref|XP_010066441.1|4.1e-3161.94PREDICTED: acyl carrier protein 4, chloroplastic isoform X2 [Eucalyptus grandis][more]
gi|702418546|ref|XP_010066440.1|1.0e-2961.48PREDICTED: acyl carrier protein 4, chloroplastic isoform X1 [Eucalyptus grandis][more]
gi|225425224|ref|XP_002267614.1|5.0e-2980.23PREDICTED: acyl carrier protein 1, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0009245 lipid A biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0009416 response to light stimulus
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
molecular_function GO:0000035 acyl binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G00170.1CSPI01G00170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 85..126
score: 2.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 54..128
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 54..126
score: 7.6
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 83..98
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 44..130
score: 2.1
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 57..124
score: 2.0
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 55..125
score: 19
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 52..128
score: 1.19
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..133
score: 3.0
NoneNo IPR availablePANTHERPTHR20863:SF28ACYL CARRIER PROTEIN 4, CHLOROPLASTICcoord: 1..133
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G00170Cla019314Watermelon (97103) v1cpiwmB099
CSPI01G00170Csa1G000670Cucumber (Chinese Long) v2cpicuB000
CSPI01G00170MELO3C026170Melon (DHL92) v3.5.1cpimeB055
CSPI01G00170ClCG06G018280Watermelon (Charleston Gray)cpiwcgB083
CSPI01G00170Lsi06G016750Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G00170MELO3C026170.2Melon (DHL92) v3.6.1cpimedB049
CSPI01G00170CsaV3_1G000160Cucumber (Chinese Long) v3cpicucB001
CSPI01G00170Cla97C06G128040Watermelon (97103) v2cpiwmbB079
CSPI01G00170Bhi02G000477Wax gourdcpiwgoB081
CSPI01G00170Cucsa.156980Cucumber (Gy14) v1cgycpiB229
CSPI01G00170CmaCh10G000250Cucurbita maxima (Rimu)cmacpiB049
CSPI01G00170CmoCh10G000230Cucurbita moschata (Rifu)cmocpiB040
CSPI01G00170Cp4.1LG18g09290Cucurbita pepo (Zucchini)cpecpiB361
CSPI01G00170CsGy1G000150Cucumber (Gy14) v2cgybcpiB001
CSPI01G00170Carg10249Silver-seed gourdcarcpiB0396
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G00170Cucurbita maxima (Rimu)cmacpiB085
CSPI01G00170Cucurbita maxima (Rimu)cmacpiB227
CSPI01G00170Cucurbita moschata (Rifu)cmocpiB079
CSPI01G00170Cucurbita moschata (Rifu)cmocpiB213
CSPI01G00170Cucumber (Chinese Long) v2cpicuB009
CSPI01G00170Cucumber (Chinese Long) v2cpicuB024
CSPI01G00170Melon (DHL92) v3.5.1cpimeB015
CSPI01G00170Melon (DHL92) v3.5.1cpimeB079
CSPI01G00170Watermelon (Charleston Gray)cpiwcgB053
CSPI01G00170Watermelon (97103) v1cpiwmB029
CSPI01G00170Cucurbita pepo (Zucchini)cpecpiB515
CSPI01G00170Cucurbita pepo (Zucchini)cpecpiB656
CSPI01G00170Bottle gourd (USVL1VR-Ls)cpilsiB001
CSPI01G00170Bottle gourd (USVL1VR-Ls)cpilsiB041
CSPI01G00170Melon (DHL92) v3.6.1cpimedB014
CSPI01G00170Cucumber (Gy14) v2cgybcpiB013
CSPI01G00170Cucumber (Gy14) v2cgybcpiB095
CSPI01G00170Silver-seed gourdcarcpiB0642
CSPI01G00170Cucumber (Chinese Long) v3cpicucB015
CSPI01G00170Cucumber (Chinese Long) v3cpicucB028
CSPI01G00170Cucumber (Chinese Long) v3cpicucB053
CSPI01G00170Watermelon (97103) v2cpiwmbB051
CSPI01G00170Wax gourdcpiwgoB061
CSPI01G00170Wild cucumber (PI 183967)cpicpiB003
CSPI01G00170Wild cucumber (PI 183967)cpicpiB014