CsaV3_1G000160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000160
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAcyl carrier protein
Locationchr1 : 121467 .. 123328 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGATTTTAGTGTTACATTTTAGACTGTAGAACCAATAATATAGTTTGTGGAGCAGACAAGTTCTTAATATAGTTTGAAAAATGTTTATATATATATATTTGTAAGAAAAGTGTTTTTAAAAAGTTGGTTGAAAGAATTTGGGTAAGGAAATCGGGCATGTAGATAGGATTTGATAAAAATGGATAATATGGAGGGAGAAGCAATGTCCACCACTCATCAAAACCAGTAAAACTACTTAATCCAATCCCTTCTTCATCTTCCTATCCTCCATGTTTCTGGGGTTTTGAAGTTTATTATACAAACGTAACTACACCCTCATTATTCAGTGGTAATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGGTGTTCTTTCTATCCTATCTATCTATTGTATATACAATTCTGTAGCCTAAAATGGTTCTTTATATATCATTAATTAACTGTATGCTGCTGCTTGCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGTAATTTAACTCGAAGTGTCTCTAAACTAATTTGTGAATTTGAGTTTCAAACTAATTAAGTGTATGAACAGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTACGTCCTCTTATCCTTACTTAATTTAACTACCATTCTGTTCATTGCTTGAATATATATATGTGTGTGTGTGTCGGAATGGCCACACAGGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATATAGCTTTGCTTTTAGTATTATGTTGAAGTTGTATTATTCCAAGAGGCAGATGACAAGAGTTTGGTTGGGGTTGGGTTGAGCAAATAGGATTAGAATGTTCTTTTTTTCCTCAAATGATTTTTTTAAGCAAATTAATGTACTTCTACTCCATCAACGTAACTTGTTAGCTACAAAATTTAAAATGTAATATGAATTGTAGTGTTGTGTTGTTTTCTGTTCTCTAAACGAGGAGAGGATCGATCAGTCTATTTCAGTGATTCCAGTGGAGACGAAACTACAGTAGATAGTACTATTAGCCATTCAGTTTCTTTTTAAAAATAAAGCTCTCGAACTTTTTTCCCTCGAAAAGGGAAGGGAGAAAAAACCAATGGAAAGAGATGGGTTTTCAAAACTACTTTTATACTAATTATAATTTATGATTAAGTGGGCTCCATCTGAGAACACAAGTAACCCAATTTAATGGAGGGTTTGTTTTTGAAGACCAAAGTAGTTAGCCTCAGGTAACAAGACACACTATCACTTCAGCACAGAGTGATTGTAGATATGAAAACTCAATTTCTAAAGTTCAAATGCTGGGGAAATTAATGTTTCTGTTTTAAGAACAAACGCATATAAGTTAAGTGAGTTGCATAATGAGAAGCATGGTTATGAAAATGATACCTGTCATCTCTTTATGTTATGGTTTTGTTGCTTTATTTAGATACCGCCATAATTTATGCAAAGCAGCGAAACCCCACTGGCTCTGCGCTCACACACTTGCACCTTTTCAACAGTGGTCCAAAGGCCCACATATTGTAACTTGTAAGCTCTCCATCCATACAATCCATACTTCACAAGAGAGAGAGAGAGAGAGAGAAG

mRNA sequence

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Protein sequence

MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQQS
Homology
[Close]
BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_004138024.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 Acyl carrier protein [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo])

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T LRF +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

[Close]
BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 8.7e-46
Identity = 110/145 (75.86%), Postives = 120/145 (82.76%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T LRF +P+NQA K + N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLRFRIPLNQAAKTDQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

[Close]
BLAST of CsaV3_1G000160 vs. NCBI nr
Match: XP_022921630.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHN--QLLRRSLLGRGFLNNNNAF----------HFRVS 60
           MASFS+T L F +P+NQA K N N  Q+LRRS  G G L  +N F          H RVS
Sbjct: 3   MASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLRVS 62

Query: 61  CAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEE 120
           CAAKPET+DKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEE
Sbjct: 63  CAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINIEE 122

Query: 121 DNAQNITTVQEAADLIENLVVKQQS 134
           DNAQNITTVQEAADLIE+LVVKQQS
Sbjct: 123 DNAQNITTVQEAADLIEDLVVKQQS 147

[Close]
BLAST of CsaV3_1G000160 vs. TAIR10
Match: AT4G25050.2 (acyl carrier protein 4)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFSINIEE 120
            IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+I++EE
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEE 120

Query: 121 DNAQNITTVQEAADLIENLVVKQ 132
            +AQNITT+QEAADLIE+LV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 143

[Close]
BLAST of CsaV3_1G000160 vs. TAIR10
Match: AT1G54580.1 (acyl carrier protein 2)

HSP 1 Score: 110.5 bits (275), Expect = 7.9e-25
Identity = 56/85 (65.88%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           VSCAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L+ ++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLFEK 134

[Close]
BLAST of CsaV3_1G000160 vs. TAIR10
Match: AT1G54630.1 (acyl carrier protein 3)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           V CAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L++++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLLEK 134

[Close]
BLAST of CsaV3_1G000160 vs. TAIR10
Match: AT5G27200.1 (acyl carrier protein 5)

HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22
Identity = 63/127 (49.61%), Postives = 82/127 (64.57%), Query Frame = 0 

Query: 2   ASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCS 61
           A FSAT+ RFC+   QA   N+ +    S   R  +    A    VSCA K ET++KV  
Sbjct: 13  APFSATTTRFCLN-KQATIFNNEKTNNLSFSLRRLMPARLA----VSCAVKQETVEKVSE 72

Query: 62  IVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAA 121
           IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF I + E+ A+ I TVQ+AA
Sbjct: 73  IVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIATVQQAA 132

Query: 122 DLIENLV 129
           +LIE LV
Sbjct: 133 ELIEELV 134

[Close]
BLAST of CsaV3_1G000160 vs. TAIR10
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 99.0 bits (245), Expect = 2.4e-21
Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = 0 

Query: 5   SATSLRFCMP--INQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSI 64
           + T + F  P  I+   K N +  LRRS+  R            VSCAAK ET++KV +I
Sbjct: 17  ATTRISFQKPALISNHGKTNLSFNLRRSIPSR---------RLSVSCAAKQETIEKVSAI 76

Query: 65  VRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD 124
           V+KQL+L    ++  E+KFA LGADSLDTVEI+M LEEEF+I + E+ AQ I TV++AA+
Sbjct: 77  VKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQAAE 133

Query: 125 LIENLV 129
           LIE L+
Sbjct: 137 LIEELI 133

[Close]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match: sp|P93092|ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 0 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           F V CAAKPET++KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF I
Sbjct: 48  FVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGI 107

Query: 105 NIEEDNAQNITTVQEAADLIENLVVKQ 132
           N+EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 108 NVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match: sp|Q9SW21|ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-27
Identity = 69/131 (52.67%), Postives = 92/131 (70.23%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
            IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNITT+QEA
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 120

Query: 121 ADLIENLVVKQ 132
           ADLIE+LV K+
Sbjct: 121 ADLIEDLVQKK 131

[Close]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match: sp|P52412|ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 60/98 (61.22%), Postives = 81/98 (82.65%), Query Frame = 0 

Query: 34  RGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVE 93
           + F +   +F  RV+C AKPET+ KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVE
Sbjct: 38  KSFFSRRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVE 97

Query: 94  IIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           I+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 98  IVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match: sp|P52411|ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-26
Identity = 61/94 (64.89%), Postives = 79/94 (84.04%), Query Frame = 0 

Query: 38  NNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT 97
           ++ ++F  RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M 
Sbjct: 45  SSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMG 104

Query: 98  LEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 105 LEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match: sp|P52414|ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-25
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 37  LNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIM 96
           L ++     RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M
Sbjct: 43  LRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVM 102

Query: 97  TLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
            LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 103 GLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match: tr|A0A0A0LNR6|A0A0A0LNR6_CUCSA (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match: tr|A0A1S3CLC5|A0A1S3CLC5_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.6e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match: tr|E5GBM2|E5GBM2_CUCME (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.6e-59
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match: tr|A0A059BF77|A0A059BF77_EUCGR (Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 0 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLG---RGFLNNNNAFHFRVSCAAKPETLD 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCAAKPET+D
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAAKPETVD 60

Query: 61  KVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 120
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 121 QEAADLIENLVVKQ 132
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 133

[Close]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match: tr|A0A200R3T5|A0A200R3T5_9MAGN (Acyl carrier protein OS=Macleaya cordata OX=56857 GN=BVC80_1837g201 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           F VSCAAKPET+ KVC IVRKQLALP  SELTPESKF+ALGADSLDTVEI+M LEEEF I
Sbjct: 30  FHVSCAAKPETVQKVCEIVRKQLALPPESELTPESKFSALGADSLDTVEIVMGLEEEFDI 89

Query: 105 NIEEDNAQNITTVQEAADLIENLVVKQ 132
           ++EE+N+QNITTVQEAADLIENL+ K+
Sbjct: 90  SVEEENSQNITTVQEAADLIENLIQKK 116

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138024.11.9e-64100.00PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 A... [more]
XP_008464386.12.4e-5993.23PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl... [more]
XP_022987144.12.3e-4676.55acyl carrier protein 4, chloroplastic-like [Cucurbita maxima][more]
XP_023516582.18.7e-4675.86acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022921630.11.5e-4575.86acyl carrier protein 4, chloroplastic-like [Cucurbita moschata][more]
BLAST of CsaV3_1G000160 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25050.21.2e-2548.25acyl carrier protein 4[more]
AT1G54580.17.9e-2565.88acyl carrier protein 2[more]
AT1G54630.12.3e-2464.71acyl carrier protein 3[more]
AT5G27200.18.2e-2249.61acyl carrier protein 5[more]
AT3G05020.12.4e-2148.41acyl carrier protein 1[more]
BLAST of CsaV3_1G000160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93092|ACP1_CASGL3.6e-2771.26Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S... [more]
sp|Q9SW21|ACP4_ARATH4.7e-2752.67Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE... [more]
sp|P52412|ACP2_CUPLA1.8e-2661.22Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=... [more]
sp|P52411|ACP1_CUPLA6.8e-2664.89Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=... [more]
sp|P52414|ACP4_CUPLA5.8e-2564.21Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ... [more]
BLAST of CsaV3_1G000160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNR6|A0A0A0LNR6_CUCSA1.2e-64100.00Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1[more]
tr|A0A1S3CLC5|A0A1S3CLC5_CUCME1.6e-5993.23Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1[more]
tr|E5GBM2|E5GBM2_CUCME1.6e-5993.23Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A059BF77|A0A059BF77_EUCGR1.2e-3061.94Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1[more]
tr|A0A200R3T5|A0A200R3T5_9MAGN1.7e-2980.46Acyl carrier protein OS=Macleaya cordata OX=56857 GN=BVC80_1837g201 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
IPR003231Acyl_carrier
IPR036736ACP-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0009245 lipid A biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0009416 response to light stimulus
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
molecular_function GO:0000035 acyl binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000160.1CsaV3_1G000160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036736ACP-like superfamilyGENE3DG3DSA:1.10.1200.10coord: 51..131
e-value: 5.7E-24
score: 86.2
IPR036736ACP-like superfamilySUPERFAMILYSSF47336ACP-likecoord: 52..128
IPR003231Acyl carrier protein (ACP)TIGRFAMTIGR00517TIGR00517coord: 54..126
e-value: 7.6E-23
score: 78.2
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 85..126
e-value: 2.0E-12
score: 169.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 54..128
score: 17.156
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 57..124
e-value: 2.1E-12
score: 47.1
IPR009081Phosphopantetheine binding ACP domainPROSITEPS50075CARRIERcoord: 53..128
score: 21.333
NoneNo IPR availablePANTHERPTHR20863:SF29ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..131
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 83..98

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000160CSPI01G00170Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000160Cucsa.156980Cucumber (Gy14) v1cgycucB236
CsaV3_1G000160CmaCh10G000250Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000160CmoCh10G000230Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000160Cp4.1LG18g09290Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000160CsGy1G000150Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000160Carg10249Silver-seed gourdcarcucB0395
CsaV3_1G000160Cla019314Watermelon (97103) v1cucwmB105
CsaV3_1G000160MELO3C026170Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000160ClCG06G018280Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000160Lsi06G016750Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000160MELO3C026170.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000160Cla97C06G128040Watermelon (97103) v2cucwmbB076
CsaV3_1G000160Bhi02G000477Wax gourdcucwgoB087
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000160Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000160Cucumber (Chinese Long) v3cuccucB017
CsaV3_1G000160Silver-seed gourdcarcucB0643
CsaV3_1G000160Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000160Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000160Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000160Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000160Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000160Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000160Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000160Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000160Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000160Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000160Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000160Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000160Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000160Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000160Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000160Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000160Watermelon (97103) v1cucwmB032
CsaV3_1G000160Watermelon (97103) v2cucwmbB048
CsaV3_1G000160Wax gourdcucwgoB062