Bhi02G000477 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G000477
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Acyl carrier protein
Location	chr2 : 12187948 .. 12189140 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGATAGAAATAGAAATTTTGGAAGAGGGCAGGTGAGTGTGTGGGGCAAATGTGTAGATAGGATTTGATAAAATGGATGGAGGGAGAAGAAATGTCCGCCACTCATTACTCATTTCCATTGAGCGCTCCAAACCAACAAAACTGCTCTATCCATCCAATCCATTCCTAATTCCTCCATCTCCTCCTTGCCTTGTAATACCATCCAACTCACTCTCTGTTAGTGTTAGGTGTGTAATGGTAATGGCTTCTATTTCAGCTACTTCCCTCAGATTCTGCATGCCTCTCAACCAACCTACCAAGATGAACCACAACCAGGTATTCTCCCTATCTATTAATGTATTCTATTCTATTGTAAGTACAATTCCCAAGGGCCTAGCCTAAACCTAAATGATATTTATATCATTAATTTAATTGTATGCTGCTGCTGGCACTTGCACTGGCAGCTTCTCAGAACAAGCTCCATTGGCCGGGGATTGCTCAACAATAATGCTTTCCACCTTCGTGTCTCTTGTGCGGTAACTAAGTTTCCCATTTTCATTATTTGAACTTTATCAATTGACAGACTTTGGAACTTAATTAAGTGTATGGAACAGGCCAAACCAGAGACAGTGGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAATCCTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCTGACTCCCTCGACACAGTACGTCTTATATCCTTCTTCACTTTTCTTTTAAGATTCTGTTCATTGTTCCATTTGACAAAATCAAATATATAATATATATATATATACTTTTTGGCATGCCCACAGGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAACATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAATCACTATAGGCTTTTAGTATGTTAAAGTTGTATTATTCCAAGAGGCAGATGATAAGAAGAGTTTAGTAGGTTAGGATGTTCTTTTTTCCTCAAATGTTTTTCTTGAGCAAATTAATGTGCTTCTACTCCAACTTATAAGTTACAAATTTATAATCCAATATGAATGTTTTCTGCTCTCTAAACGGGGAGAGGATCGATCAGTCTATTTCATGCATTGCAGTGGTGGATAACCACAGTA

mRNA sequence

GGAGATAGAAATAGAAATTTTGGAAGAGGGCAGGTGAGTGTGTGGGGCAAATGTGTAGATAGGATTTGATAAAATGGATGGAGGGAGAAGAAATGTCCGCCACTCATTACTCATTTCCATTGAGCGCTCCAAACCAACAAAACTGCTCTATCCATCCAATCCATTCCTAATTCCTCCATCTCCTCCTTGCCTTGTAATACCATCCAACTCACTCTCTGTTAGTGTTAGGTGTGTAATGGTAATGGCTTCTATTTCAGCTACTTCCCTCAGATTCTGCATGCCTCTCAACCAACCTACCAAGATGAACCACAACCAGCTTCTCAGAACAAGCTCCATTGGCCGGGGATTGCTCAACAATAATGCTTTCCACCTTCGTGTCTCTTGTGCGGCCAAACCAGAGACAGTGGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAATCCTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCTGACTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAACATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAATCACTATAGGCTTTTAGTATGTTAAAGTTGTATTATTCCAAGAGGCAGATGATAAGAAGAGTTTAGTAGGTTAGGATGTTCTTTTTTCCTCAAATGTTTTTCTTGAGCAAATTAATGTGCTTCTACTCCAACTTATAAGTTACAAATTTATAATCCAATATGAATGTTTTCTGCTCTCTAAACGGGGAGAGGATCGATCAGTCTATTTCATGCATTGCAGTGGTGGATAACCACAGTA

Coding sequence (CDS)

ATGGATGGAGGGAGAAGAAATGTCCGCCACTCATTACTCATTTCCATTGAGCGCTCCAAACCAACAAAACTGCTCTATCCATCCAATCCATTCCTAATTCCTCCATCTCCTCCTTGCCTTGTAATACCATCCAACTCACTCTCTGTTAGTGTTAGGTGTGTAATGGTAATGGCTTCTATTTCAGCTACTTCCCTCAGATTCTGCATGCCTCTCAACCAACCTACCAAGATGAACCACAACCAGCTTCTCAGAACAAGCTCCATTGGCCGGGGATTGCTCAACAATAATGCTTTCCACCTTCGTGTCTCTTGTGCGGCCAAACCAGAGACAGTGGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAATCCTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCTGACTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAACATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAA

Protein sequence

MDGGRRNVRHSLLISIERSKPTKLLYPSNPFLIPPSPPCLVIPSNSLSVSVRCVMVMASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLLNNNAFHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

Homology

[Close]

BLAST of Bhi02G000477 vs. Swiss-Prot
Match: sp|Q9SW21|ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 76/136 (55.88%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSS------IGRGLLNNNAFHLRVSCAAKPET 116
           MAS+S TSL F  P         +Q+LR +S       GR   +  +  L++SCAAK ET
Sbjct: 1   MASLSTTSLSFKAP-----STTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAET 60

Query: 117 VDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT 176
           V KV  IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNIT
Sbjct: 61  VQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNIT 120

Query: 177 TVQEAADLIEDLVVKQ 187
           T+QEAADLIEDLV K+
Sbjct: 121 TIQEAADLIEDLVQKK 131

[Close]

BLAST of Bhi02G000477 vs. Swiss-Prot
Match: sp|P93092|ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 70/134 (52.24%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 57  MASISATSLRFC--MPLNQPTKMNHNQLLRTSSIGRGL--LNNNAFHLRVSCAAKPETVD 116
           MAS++ TS+          P+++++ + +     G+    L   +    V CAAKPETV+
Sbjct: 1   MASVTGTSISMASFKASLAPSRVSNLRSVSLPIKGKSFAPLRMRSARFVVCCAAKPETVE 60

Query: 117 KVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 176
           KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF IN+EE++AQ+I TV
Sbjct: 61  KVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQSIATV 120

Query: 177 QEAADLIEDLVVKQ 187
           Q+AADLIE L+ K+
Sbjct: 121 QDAADLIEKLIEKK 134

[Close]

BLAST of Bhi02G000477 vs. Swiss-Prot
Match: sp|P52411|ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 94  NNNAFHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTL 153
           + ++F LRVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M L
Sbjct: 46  SKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGL 105

Query: 154 EEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 187
           EEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 106 EEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]

BLAST of Bhi02G000477 vs. Swiss-Prot
Match: sp|P52412|ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.6e-26
Identity = 61/90 (67.78%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 97  AFHLRVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEE 156
           +F LRV+C AKPETV KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVEI+M LEEE
Sbjct: 46  SFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEE 105

Query: 157 FSINIEEDNAQNITTVQEAADLIEDLVVKQ 187
           F I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 106 FGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]

BLAST of Bhi02G000477 vs. Swiss-Prot
Match: sp|P52414|ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-25
Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 101 RVSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSIN 160
           RVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M LEEEF I+
Sbjct: 52  RVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGIS 111

Query: 161 IEEDNAQNITTVQEAADLIEDLVVKQ 187
           +EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 112 VEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]

BLAST of Bhi02G000477 vs. TAIR10
Match: AT4G25050.2 (acyl carrier protein 4)

HSP 1 Score: 115.5 bits (288), Expect = 3.4e-26
Identity = 76/148 (51.35%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSS------IGRGLLNNNAFHLRVSCAAKPET 116
           MAS+S TSL F  P         +Q+LR +S       GR   +  +  L++SCAAK ET
Sbjct: 1   MASLSTTSLSFKAP-----STTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAET 60

Query: 117 VDKVCSIVRKQLALPESSELTPESKFAALGADSLDT------------VEIIMTLEEEFS 176
           V KV  IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+
Sbjct: 61  VQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFN 120

Query: 177 INIEEDNAQNITTVQEAADLIEDLVVKQ 187
           I++EE +AQNITT+QEAADLIEDLV K+
Sbjct: 121 ISVEESDAQNITTIQEAADLIEDLVQKK 143

[Close]

BLAST of Bhi02G000477 vs. TAIR10
Match: AT1G54580.1 (acyl carrier protein 2)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 84  RTSSIGRGLLNNNAFHLR-------VSCAAKPETVDKVCSIVRKQLALPESSELTPESKF 143
           +  S   G  ++ +F+LR       VSCAAKPETVDKVC++VRKQL+L E+ E+T  +KF
Sbjct: 25  QVKSFSNGRRSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKF 84

Query: 144 AALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 187
           AALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+L+ ++
Sbjct: 85  AALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLFEK 134

[Close]

BLAST of Bhi02G000477 vs. TAIR10
Match: AT1G54630.1 (acyl carrier protein 3)

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-25
Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 84  RTSSIGRGLLNNNAFHLR-------VSCAAKPETVDKVCSIVRKQLALPESSELTPESKF 143
           +  S   G  +N +F+LR       V CAAKPETVDKVC++VRKQL+L E+ E+T  +KF
Sbjct: 25  QVKSFSYGSRSNLSFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKF 84

Query: 144 AALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ 187
           AALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+L++++
Sbjct: 85  AALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLLEK 134

[Close]

BLAST of Bhi02G000477 vs. TAIR10
Match: AT5G27200.1 (acyl carrier protein 5)

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-23
Identity = 63/130 (48.46%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 54  VMVMASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLLNNNAFHLRVSCAAKPETVDK 113
           + + A  SAT+ RFC  LN+   + +N+  +T+++   L       L VSCA K ETV+K
Sbjct: 9   ISMQAPFSATTTRFC--LNKQATIFNNE--KTNNLSFSLRRLMPARLAVSCAVKQETVEK 68

Query: 114 VCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQ 173
           V  IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF I + E+ A+ I TVQ
Sbjct: 69  VSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIATVQ 128

Query: 174 EAADLIEDLV 184
           +AA+LIE+LV
Sbjct: 129 QAAELIEELV 134

[Close]

BLAST of Bhi02G000477 vs. TAIR10
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 44  SNSLSVSVRCVMVMASISATSLRFCMP--LNQPTKMNHNQLLRTSSIGRGLLNNNAFHLR 103
           S S+S+   C      ++ T + F  P  ++   K N +  LR S   R         L 
Sbjct: 6   SASVSLQTSC------LATTRISFQKPALISNHGKTNLSFNLRRSIPSR--------RLS 65

Query: 104 VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 163
           VSCAAK ET++KV +IV+KQL+L    ++  E+KFA LGADSLDTVEI+M LEEEF+I +
Sbjct: 66  VSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQM 125

Query: 164 EEDNAQNITTVQEAADLIEDLV 184
            E+ AQ I TV++AA+LIE+L+
Sbjct: 126 AEEKAQKIATVEQAAELIEELI 133

[Close]

BLAST of Bhi02G000477 vs. TrEMBL
Match: tr|A0A1S3CLC5|A0A1S3CLC5_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.6e-56
Identity = 122/133 (91.73%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 116
           MAS SATSLRFC+P+NQ  KMNHNQLLR S  G+GLL NNNAFHLRVSCAAKPETVDKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 117 SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 176
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 177 ADLIEDLVVKQQS 189
           ADLIEDLVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]

BLAST of Bhi02G000477 vs. TrEMBL
Match: tr|E5GBM2|E5GBM2_CUCME (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.6e-56
Identity = 122/133 (91.73%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 116
           MAS SATSLRFC+P+NQ  KMNHNQLLR S  G+GLL NNNAFHLRVSCAAKPETVDKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 117 SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 176
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 177 ADLIEDLVVKQQS 189
           ADLIEDLVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]

BLAST of Bhi02G000477 vs. TrEMBL
Match: tr|A0A0A0LNR6|A0A0A0LNR6_CUCSA (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 116
           MAS SATSLRFCMP+NQ  KMNHNQLLR S +GRG L NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 117 SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 176
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 177 ADLIEDLVVKQQS 189
           ADLIE+LVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]

BLAST of Bhi02G000477 vs. TrEMBL
Match: tr|A0A059BF77|A0A059BF77_EUCGR (Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIG---RGLLNNNAFHLRVSCAAKPETVDK 116
           MAS+SA S+ F        K N    L+  S+G    G  +  +   RVSCAAKPETVDK
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSSRFRVSCAAKPETVDK 60

Query: 117 VCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQ 176
           VC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTVQ
Sbjct: 61  VCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTVQ 120

Query: 177 EAADLIEDLVVKQ 187
           EAADLIE LV K+
Sbjct: 121 EAADLIEKLVQKK 133

[Close]

BLAST of Bhi02G000477 vs. TrEMBL
Match: tr|A0A059BDY2|A0A059BDY2_EUCGR (Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.6e-30
Identity = 82/134 (61.19%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIG---RGLLNNNAFHLRVSCA-AKPETVD 116
           MAS+SA S+ F        K N    L+  S+G    G  +  +   RVSCA AKPETVD
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSSRFRVSCAQAKPETVD 60

Query: 117 KVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 176
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 177 QEAADLIEDLVVKQ 187
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 134

[Close]

BLAST of Bhi02G000477 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo])

HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55
Identity = 122/133 (91.73%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 116
           MAS SATSLRFC+P+NQ  KMNHNQLLR S  G+GLL NNNAFHLRVSCAAKPETVDKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 117 SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 176
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 177 ADLIEDLVVKQQS 189
           ADLIEDLVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]

BLAST of Bhi02G000477 vs. NCBI nr
Match: XP_004138024.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 Acyl carrier protein [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 2.9e-55
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 57  MASISATSLRFCMPLNQPTKMNHNQLLRTSSIGRGLL-NNNAFHLRVSCAAKPETVDKVC 116
           MAS SATSLRFCMP+NQ  KMNHNQLLR S +GRG L NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 117 SIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 176
           SIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 177 ADLIEDLVVKQQS 189
           ADLIE+LVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]

BLAST of Bhi02G000477 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 5.0e-47
Identity = 116/147 (78.91%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 55  MVMASISATSLRFCMPLNQPTKMNHN--QLLRTSSIGR-GLLNNNAF----------HLR 114
           M MAS S+T LRF +PLNQ  K N N  Q+LR SS G  GLL +N F          HLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLR 60

Query: 115 VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 174
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKF+ALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 175 EEDNAQNITTVQEAADLIEDLVVKQQS 189
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of Bhi02G000477 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46
Identity = 115/147 (78.23%), Postives = 121/147 (82.31%), Query Frame = 0


Query: 55  MVMASISATSLRFCMPLNQPTKMNHN--QLLRTSSIGR-GLLNNNAF----------HLR 114
           M MAS S+T LRF +PLNQ  K + N  Q+LR SS G  GLL +N F          HLR
Sbjct: 1   MAMASFSSTCLRFRIPLNQAAKTDQNQCQVLRRSSAGAGGLLKSNGFHLVTHRTSQSHLR 60

Query: 115 VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 174
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKF+ALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 175 EEDNAQNITTVQEAADLIEDLVVKQQS 189
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

[Close]

BLAST of Bhi02G000477 vs. NCBI nr
Match: XP_022921630.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 3.2e-46
Identity = 115/147 (78.23%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 55  MVMASISATSLRFCMPLNQPTKMNHN--QLLRTSSIGR-GLLNNNAF----------HLR 114
           M MAS S+T L F +PLNQ  K N N  Q+LR SS G  GLL +N F          HLR
Sbjct: 1   MAMASFSSTCLGFRIPLNQAAKTNQNQCQVLRRSSAGAGGLLKSNGFRLVTHRTSQSHLR 60

Query: 115 VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 174
           VSCAAKPETVDKVCSIVRKQLALPESSELTPESKF+ALGADSLDTVEIIMTLEEEFSINI
Sbjct: 61  VSCAAKPETVDKVCSIVRKQLALPESSELTPESKFSALGADSLDTVEIIMTLEEEFSINI 120

Query: 175 EEDNAQNITTVQEAADLIEDLVVKQQS 189
           EEDNAQNITTVQEAADLIEDLVVKQQS
Sbjct: 121 EEDNAQNITTVQEAADLIEDLVVKQQS 147

The following BLAST results are available for this feature:

BLAST of Bhi02G000477 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SW21\|ACP4_ARATH	1.3e-27	55.88	Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE...	[more]
sp\|P93092\|ACP1_CASGL	3.3e-26	52.24	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
sp\|P52411\|ACP1_CUPLA	3.3e-26	67.74	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
sp\|P52412\|ACP2_CUPLA	5.6e-26	67.78	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
sp\|P52414\|ACP4_CUPLA	8.1e-25	70.93	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]

BLAST of Bhi02G000477 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25050.2	3.4e-26	51.35	acyl carrier protein 4	[more]
AT1G54580.1	1.7e-25	56.36	acyl carrier protein 2	[more]
AT1G54630.1	2.2e-25	56.36	acyl carrier protein 3	[more]
AT5G27200.1	2.7e-23	48.46	acyl carrier protein 5	[more]
AT3G05020.1	1.3e-20	45.07	acyl carrier protein 1	[more]

BLAST of Bhi02G000477 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLC5\|A0A1S3CLC5_CUCME	8.6e-56	91.73	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1	[more]
tr\|E5GBM2\|E5GBM2_CUCME	8.6e-56	91.73	Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A0A0LNR6\|A0A0A0LNR6_CUCSA	1.9e-55	90.23	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1	[more]
tr\|A0A059BF77\|A0A059BF77_EUCGR	1.5e-31	61.65	Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1	[more]
tr\|A0A059BDY2\|A0A059BDY2_EUCGR	3.6e-30	61.19	Acyl carrier protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G01960 PE=3 SV=1	[more]

BLAST of Bhi02G000477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464386.1	1.3e-55	91.73	PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl...	[more]
XP_004138024.1	2.9e-55	90.23	PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus] >KGN63443.1 A...	[more]
XP_022987144.1	5.0e-47	78.91	acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]	[more]
XP_023516582.1	1.9e-46	78.23	acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921630.1	3.2e-46	78.23	acyl carrier protein 4, chloroplastic-like [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0031177	phosphopantetheine binding

Vocabulary: **INTERPRO**
Term	Definition
IPR006162	Ppantetheine_attach_site
IPR003231	Acyl_carrier
IPR036736	ACP-like_sf
IPR009081	PP-bd_ACP
IPR020806	PKS_PP-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009245	lipid A biosynthetic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0000036	ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
molecular_function	GO:0000035	acyl binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M000477	Bhi02M000477	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 111..183 e-value: 0.0081 score: 17.8
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 112..179 e-value: 6.8E-12 score: 45.5
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 108..183 score: 21.294
IPR036736	ACP-like superfamily	GENE3D	G3DSA:1.10.1200.10		coord: 106..186 e-value: 7.1E-24 score: 85.9
IPR036736	ACP-like superfamily	SUPERFAMILY	SSF47336	ACP-like	coord: 108..183
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 109..181 e-value: 3.6E-22 score: 76.0
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 140..180 e-value: 2.0E-11 score: 165.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 109..183 score: 16.994
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 57..186
None	No IPR available	PANTHER	PTHR20863:SF29	ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 57..186
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 138..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G000477	Csa1G000670	Cucumber (Chinese Long) v2	cuwgoB079
Bhi02G000477	MELO3C026170	Melon (DHL92) v3.5.1	mewgoB309
Bhi02G000477	ClCG06G018280	Watermelon (Charleston Gray)	wcgwgoB550
Bhi02G000477	CSPI01G00170	Wild cucumber (PI 183967)	cpiwgoB081
Bhi02G000477	Cucsa.156980	Cucumber (Gy14) v1	cgywgoB304
Bhi02G000477	CmaCh10G000250	Cucurbita maxima (Rimu)	cmawgoB0080
Bhi02G000477	CmoCh10G000230	Cucurbita moschata (Rifu)	cmowgoB0075
Bhi02G000477	Lsi06G016750	Bottle gourd (USVL1VR-Ls)	lsiwgoB525
Bhi02G000477	Cp4.1LG18g09290	Cucurbita pepo (Zucchini)	cpewgoB0471
Bhi02G000477	CsGy1G000150	Cucumber (Gy14) v2	cgybwgoB077
Bhi02G000477	MELO3C026170.2	Melon (DHL92) v3.6.1	medwgoB308
Bhi02G000477	Carg10249	Silver-seed gourd	carwgoB0448
Bhi02G000477	CsaV3_1G000160	Cucumber (Chinese Long) v3	cucwgoB087
Bhi02G000477	Cla019314	Watermelon (97103) v1	wgowmB687
Bhi02G000477	Cla97C06G128040	Watermelon (97103) v2	wgowmbB658

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G000477	Wax gourd	wgowgoB124
Bhi02G000477	Cucurbita maxima (Rimu)	cmawgoB0154
Bhi02G000477	Cucurbita moschata (Rifu)	cmowgoB0149
Bhi02G000477	Silver-seed gourd	carwgoB0724