Csa1G000670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G000670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAcyl carrier protein; contains IPR003231 (Acyl carrier protein (ACP)), IPR009081 (Acyl carrier protein-like)
LocationChr1 : 103087 .. 104228 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAATTTGGGTAAGGAAATCGGGCATGTAGATAGGATTTGATAAAAATGGATAATATGGAGGGAGAAGCAATGTCCACCACTCATCAAAACCAGTAAAACTACTTAATCCAATCCCTTCTTCATCTTCCTATCCTCCATGTTTCTGGGGTTTTGAAGTTTATTATACAAACGTAACTACACCCTCATTATTCAGTGGTAATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGGTGTTCTTTCTATCCTATCTATCTATTGTATATACAATTCTGTAGCCTAAAATGGTTCTTTATATATCATTAATTAACTGTATGCTGCTGCTTGCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGTAATTTAACTCGAAGTGTCTCTAAACTAATTTGTGAATTTGAGTTTCAAACTAATTAAGTGTATGAACAGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTACGTCCTCTTATCCTTACTTAATTTAACTACCATTCTGTTCATTGCTTGAATATATATATGTGTGTGTGTGTCGGAATGGCCACACAGGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATATAGCTTTGCTTTTAGTATTATGTTGAAGTTGTATTATTCCAAGAGGCAGATGACAAGAGTTTGGTTGGGGTTGGGTTGAGCAAATAGGATTAGAATGTTCTTTTTTTCCTCAAATGATTTTTTTAAGCAAATTAATGTACTTCTACTCCATCAACGTAACTTGTTAGCTACAAAATTTAAAATGTAATATGAATTGTAGTGTTGTGTTGTTTTCTGTTCTCTAAACGAGGAGAGGATCGATCAGTCTATTTCAGTGATTCCAGTGGAGAC

mRNA sequence

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTCTTTTTCAGCTACTTCCCTCAGATTCTGCATGCCTATCAACCAAGCTAACAAAATGAACCACAATCAGCTTCTCAGAAGAAGCTTGCTCGGCCGGGGATTTCTCAACAATAATAATGCTTTCCACTTTCGTGTCTCTTGTGCGGCAAAACCAGAGACACTTGACAAAGTGTGTTCAATTGTGAGGAAACAATTGGCCTTGCCTGAAACCTCAGAGCTCACCCCCGAATCTAAGTTCGCGGCTCTTGGTGCTGATTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAACGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGAACCTTGTTGTTAAACAGCAATCTTAA

Protein sequence

MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQQS*
Homology
[Close]
BLAST of Csa1G000670 vs. Swiss-Prot
Match: ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.5e-29
Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
            IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNITT+QEA
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 120

Query: 121 ADLIENLVVKQ 132
           ADLIE+LV K+
Sbjct: 121 ADLIEDLVQKK 131

[Close]
BLAST of Csa1G000670 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.2e-28
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 1 

Query: 45  FRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSI 104
           F V CAAKPET++KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF I
Sbjct: 48  FVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGI 107

Query: 105 NIEEDNAQNITTVQEAADLIENLVVKQ 132
           N+EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 108 NVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]
BLAST of Csa1G000670 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.4e-28
Identity = 60/98 (61.22%), Postives = 79/98 (80.61%), Query Frame = 1 

Query: 34  RGFLNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVE 93
           + F +   +F  RV+C AKPET+ KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVE
Sbjct: 38  KSFFSRRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVE 97

Query: 94  IIMTLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           I+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 98  IVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135

[Close]
BLAST of Csa1G000670 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 1 

Query: 38  NNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT 97
           ++ ++F  RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M 
Sbjct: 45  SSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMG 104

Query: 98  LEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
           LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 105 LEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]
BLAST of Csa1G000670 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-26
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 1 

Query: 37  LNNNNAFHFRVSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIM 96
           L ++     RVSC AKPET+ KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M
Sbjct: 43  LRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVM 102

Query: 97  TLEEEFSINIEEDNAQNITTVQEAADLIENLVVKQ 132
            LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Sbjct: 103 GLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]
BLAST of Csa1G000670 vs. TrEMBL
Match: A0A0A0LNR6_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_1G000670 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of Csa1G000670 vs. TrEMBL
Match: E5GBM2_CUCME (Acyl carrier protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-61
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of Csa1G000670 vs. TrEMBL
Match: A0A059BF77_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLG---RGFLNNNNAFHFRVSCAAKPETLD 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCAAKPET+D
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAAKPETVD 60

Query: 61  KVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 120
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 121 QEAADLIENLVVKQ 132
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 133

[Close]
BLAST of Csa1G000670 vs. TrEMBL
Match: A0A059BDY2_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-31
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLG---RGFLNNNNAFHFRVSCA-AKPETL 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCA AKPET+
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAQAKPETV 60

Query: 61  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 120
           DKVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITT
Sbjct: 61  DKVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITT 120

Query: 121 VQEAADLIENLVVKQ 132
           VQEAADLIE LV K+
Sbjct: 121 VQEAADLIEKLVQKK 134

[Close]
BLAST of Csa1G000670 vs. TrEMBL
Match: B9I3Y4_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0012s10710g PE=3 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 80/133 (60.15%), Postives = 97/133 (72.93%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNN-----AFHFRVSCAAKPET 60
           MA+ SAT LRF    +Q+NK +      + +   G+  NN      A  FRVSCAAKPET
Sbjct: 47  MATVSATCLRFQPLFSQSNKSSQAAASLKPV-SVGWAKNNGFPSLKASRFRVSCAAKPET 106

Query: 61  LDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT 120
           ++KV  IVRKQLAL   +ELT ESKFAALGADSLDTVEI+M LEEEF IN+EE+N+QNIT
Sbjct: 107 VEKVIEIVRKQLALTPETELTNESKFAALGADSLDTVEIVMALEEEFDINVEEENSQNIT 166

Query: 121 TVQEAADLIENLV 129
           TV+EAAD+I+ LV
Sbjct: 167 TVREAADMIDKLV 178

[Close]
BLAST of Csa1G000670 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 69/143 (48.25%), Postives = 90/143 (62.94%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MAS S TSL F  P    +++       +S+    F ++  +   ++SCAAK ET+ KV 
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFSINIEE 120
            IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+I++EE
Sbjct: 61  DIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEE 120

Query: 121 DNAQNITTVQEAADLIENLVVKQ 132
            +AQNITT+QEAADLIE+LV K+
Sbjct: 121 SDAQNITTIQEAADLIEDLVQKK 143

[Close]
BLAST of Csa1G000670 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2)

HSP 1 Score: 114.0 bits (284), Expect = 7.1e-26
Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           VSCAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L+ ++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLFEK 134

[Close]
BLAST of Csa1G000670 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 47  VSCAAKPETLDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINI 106
           V CAAKPET+DKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I +
Sbjct: 50  VYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEM 109

Query: 107 EEDNAQNITTVQEAADLIENLVVKQ 132
            E+ AQ+I TV++AA LIE L++++
Sbjct: 110 AEEKAQSIATVEQAAALIEELLLEK 134

[Close]
BLAST of Csa1G000670 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 63/127 (49.61%), Postives = 80/127 (62.99%), Query Frame = 1 

Query: 2   ASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCS 61
           A FSAT+ RFC+   QA   N+ +    S   R  +    A    VSCA K ET++KV  
Sbjct: 13  APFSATTTRFCLN-KQATIFNNEKTNNLSFSLRRLMPARLA----VSCAVKQETVEKVSE 72

Query: 62  IVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAA 121
           IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF I + E+ A+ I TVQ+AA
Sbjct: 73  IVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIATVQQAA 132

Query: 122 DLIENLV 129
           +LIE LV
Sbjct: 133 ELIEELV 134

[Close]
BLAST of Csa1G000670 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 103.6 bits (257), Expect = 9.7e-23
Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 1 

Query: 5   SATSLRFCMP--INQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVCSI 64
           + T + F  P  I+   K N +  LRRS+  R            VSCAAK ET++KV +I
Sbjct: 17  ATTRISFQKPALISNHGKTNLSFNLRRSIPSR---------RLSVSCAAKQETIEKVSAI 76

Query: 65  VRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD 124
           V+KQL+L    ++  E+KFA LGADSLDTVEI+M LEEEF+I + E+ AQ I TV++AA+
Sbjct: 77  VKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQAAE 133

Query: 125 LIENLV 129
           LIE L+
Sbjct: 137 LIEELI 133

[Close]
BLAST of Csa1G000670 vs. NCBI nr
Match: gi|449440504|ref|XP_004138024.1| (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC
Sbjct: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIENLVVKQQS
Sbjct: 121 ADLIENLVVKQQS 133

[Close]
BLAST of Csa1G000670 vs. NCBI nr
Match: gi|659128820|ref|XP_008464386.1| (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLGRGFLNNNNAFHFRVSCAAKPETLDKVC 60
           MASFSATSLRFC+PINQANKMNHNQLLRRS  G+G L+NNNAFH RVSCAAKPET+DKVC
Sbjct: 1   MASFSATSLRFCIPINQANKMNHNQLLRRSFPGQGLLSNNNAFHLRVSCAAKPETVDKVC 60

Query: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120
           SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA
Sbjct: 61  SIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEA 120

Query: 121 ADLIENLVVKQQS 134
           ADLIE+LVVKQQS
Sbjct: 121 ADLIEDLVVKQQS 133

[Close]
BLAST of Csa1G000670 vs. NCBI nr
Match: gi|702418586|ref|XP_010066441.1| (PREDICTED: acyl carrier protein 4, chloroplastic isoform X2 [Eucalyptus grandis])

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-32
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLG---RGFLNNNNAFHFRVSCAAKPETLD 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCAAKPET+D
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAAKPETVD 60

Query: 61  KVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTV 120
           KVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITTV
Sbjct: 61  KVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITTV 120

Query: 121 QEAADLIENLVVKQ 132
           QEAADLIE LV K+
Sbjct: 121 QEAADLIEKLVQKK 133

[Close]
BLAST of Csa1G000670 vs. NCBI nr
Match: gi|702418546|ref|XP_010066440.1| (PREDICTED: acyl carrier protein 4, chloroplastic isoform X1 [Eucalyptus grandis])

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-31
Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLLG---RGFLNNNNAFHFRVSCA-AKPETL 60
           MAS SA S+ F      + K N    L+   LG    GF +  ++  FRVSCA AKPET+
Sbjct: 1   MASVSAASVTFRALSKPSLKSNETSSLKVVSLGWRKNGFPSLRSS-RFRVSCAQAKPETV 60

Query: 61  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 120
           DKVC IVRKQLALP  +ELTPESKF+A+GADSLDTVEI+M LEEEF I++EE+++QNITT
Sbjct: 61  DKVCEIVRKQLALPAEAELTPESKFSAIGADSLDTVEIVMALEEEFDISVEEESSQNITT 120

Query: 121 VQEAADLIENLVVKQ 132
           VQEAADLIE LV K+
Sbjct: 121 VQEAADLIEKLVQKK 134

[Close]
BLAST of Csa1G000670 vs. NCBI nr
Match: gi|747086702|ref|XP_011090862.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-30
Identity = 80/135 (59.26%), Postives = 103/135 (76.30%), Query Frame = 1 

Query: 1   MASFSATSLRFCMPINQANKMNHNQLLRRSLL---GRGFLNNN-NAFHFRVSCAAKPETL 60
           MASF+A+SL F  P++ + K N    LR++ L   G+GF ++   A  FRV+CAAKP+T+
Sbjct: 1   MASFTASSLSFS-PVSCSFKQNQASSLRKASLSFSGKGFPSHRLPALRFRVACAAKPDTV 60

Query: 61  DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITT 120
           +KV  IV+KQLALPE  E+  ESKFA LGADSLDTVEI+M LEEEF I +EE++AQ+ITT
Sbjct: 61  NKVVEIVKKQLALPEDREVNGESKFATLGADSLDTVEIVMGLEEEFGIAVEEESAQSITT 120

Query: 121 VQEAADLIENLVVKQ 132
           VQEAADLIE L+ K+
Sbjct: 121 VQEAADLIEKLLEKK 134

The following BLAST results are available for this feature:
BLAST of Csa1G000670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACP4_ARATH8.5e-2952.67Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1[more]
ACP1_CASGL3.2e-2871.26Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1[more]
ACP2_CUPLA9.4e-2861.22Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1[more]
ACP1_CUPLA3.6e-2764.89Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1[more]
ACP4_CUPLA3.0e-2664.21Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1[more]
BLAST of Csa1G000670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNR6_CUCSA1.2e-66100.00Acyl carrier protein OS=Cucumis sativus GN=Csa_1G000670 PE=3 SV=1[more]
E5GBM2_CUCME1.5e-6193.23Acyl carrier protein OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A059BF77_EUCGR1.2e-3261.94Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1[more]
A0A059BDY2_EUCGR2.8e-3161.48Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1[more]
B9I3Y4_POPTR1.4e-3060.15Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0012s10710g PE=3 SV=2[more]
BLAST of Csa1G000670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25050.22.2e-2748.25 acyl carrier protein 4[more]
AT1G54580.17.1e-2665.88 acyl carrier protein 2[more]
AT1G54630.12.1e-2564.71 acyl carrier protein 3[more]
AT5G27200.11.9e-2349.61 acyl carrier protein 5[more]
AT3G05020.19.7e-2348.41 acyl carrier protein 1[more]
BLAST of Csa1G000670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440504|ref|XP_004138024.1|1.7e-66100.00PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis sativus][more]
gi|659128820|ref|XP_008464386.1|2.2e-6193.23PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo][more]
gi|702418586|ref|XP_010066441.1|1.7e-3261.94PREDICTED: acyl carrier protein 4, chloroplastic isoform X2 [Eucalyptus grandis][more]
gi|702418546|ref|XP_010066440.1|4.1e-3161.48PREDICTED: acyl carrier protein 4, chloroplastic isoform X1 [Eucalyptus grandis][more]
gi|747086702|ref|XP_011090862.1|1.5e-3059.26PREDICTED: acyl carrier protein 1, chloroplastic-like [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0009245 lipid A biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0009416 response to light stimulus
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
molecular_function GO:0000035 acyl binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU107198cucumber EST collection version 3.0transcribed_cluster
CU136116cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G000670.1Csa1G000670.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107198CU107198transcribed_cluster
CU136116CU136116transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 85..126
score: 2.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 54..128
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 54..126
score: 7.6
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 83..98
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 44..130
score: 2.1
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 57..124
score: 2.0
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 55..125
score: 19
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 52..128
score: 1.19
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..133
score: 1.2
NoneNo IPR availablePANTHERPTHR20863:SF28ACYL CARRIER PROTEIN 4, CHLOROPLASTICcoord: 1..133
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G000670Cla019314Watermelon (97103) v1cuwmB094
Csa1G000670MELO3C026170Melon (DHL92) v3.5.1cumeB054
Csa1G000670ClCG06G018280Watermelon (Charleston Gray)cuwcgB081
Csa1G000670Lsi06G016750Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G000670MELO3C026170.2Melon (DHL92) v3.6.1cumedB046
Csa1G000670Cla97C06G128040Watermelon (97103) v2cuwmbB078
Csa1G000670Bhi02G000477Wax gourdcuwgoB079
Csa1G000670CSPI01G00170Wild cucumber (PI 183967)cpicuB000
Csa1G000670Cucsa.156980Cucumber (Gy14) v1cgycuB224
Csa1G000670CmaCh10G000250Cucurbita maxima (Rimu)cmacuB048
Csa1G000670CmoCh10G000230Cucurbita moschata (Rifu)cmocuB037
Csa1G000670Cp4.1LG18g09290Cucurbita pepo (Zucchini)cpecuB361
Csa1G000670CsGy1G000150Cucumber (Gy14) v2cgybcuB001
Csa1G000670Carg10249Silver-seed gourdcarcuB0391
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G000670Cucurbita pepo (Zucchini)cpecuB513
Csa1G000670Cucurbita pepo (Zucchini)cpecuB653
Csa1G000670Bottle gourd (USVL1VR-Ls)culsiB041
Csa1G000670Cucumber (Gy14) v2cgybcuB014
Csa1G000670Cucumber (Gy14) v2cgybcuB096
Csa1G000670Melon (DHL92) v3.6.1cumedB018
Csa1G000670Silver-seed gourdcarcuB0636
Csa1G000670Watermelon (97103) v2cuwmbB050
Csa1G000670Wax gourdcuwgoB061
Csa1G000670Cucumber (Chinese Long) v2cucuB002
Csa1G000670Cucumber (Chinese Long) v2cucuB014
Csa1G000670Cucurbita maxima (Rimu)cmacuB086
Csa1G000670Cucurbita maxima (Rimu)cmacuB225
Csa1G000670Cucurbita moschata (Rifu)cmocuB076
Csa1G000670Cucurbita moschata (Rifu)cmocuB211
Csa1G000670Melon (DHL92) v3.5.1cumeB022
Csa1G000670Melon (DHL92) v3.5.1cumeB078
Csa1G000670Watermelon (Charleston Gray)cuwcgB052
Csa1G000670Watermelon (97103) v1cuwmB028