Bhi02G001773 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001773
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Histone H2A
Location	chr2 : 57723001 .. 57723992 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACTCTTCCCTTACTCCCTCACTATCAAACTCATAGCTAAAGTTCCAATTCTCTCGAAAATCCCAAATTAGGGTTCCTGATTTTCCTCTCTTTTCTCTCAAATTCCATCACTTTTCTCCGATTCAACGATGAGTTCCACCGGCAGTTCCACCAAGGGCGGCAGAGGAAAACCCAAAGCCACCAAATCCGTCTCCCGATCTCACAAAGCCGGCCTCCAGTTCCCCGTCGGTAGAATCGCTAGGTTTCTCAAGGCCGGGAAGTATGCCGAACGTGTCGGCGCTGGAGCTCCGGTCTACTTATCTGCCGTCCTCGAGTATCTCGCCGCTGAGGTAACAACATCCTCAGTGATTCTGATGGAATTTTGTTTCGATTCTCTTCGATTTATTTTTAATTTTTATTAATTTTGATTTCATTTGGAATTAGGTTTTGGAGCTTGCTGGTAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATTGCTAATGGAGGTGTTTTGCCCAACATTCACCAGACTCTTTTGCCCAAAAAGGTTGGTAAAGATAAGGGTGATATTGGTTCTGCATCACAAGAATTTTAGAGATTTTAGGGTTTCTTTTGGTTTTCTTTTTTGGGGTTTGTTTCATTACTCGAGATGACAGTTCTTGTGATCTGTGAAATAGATGGGGTTTTGCTTCTGTGGCATTTGCTTCCTCTTACTGTACTTTGTCATCTTGACTTTGTTTCGATGCATATATTTTATATCCATGTGAGGTTGTTGGTGGATTTGATTCAAGAATGATGATGACCAACTCCCTTTTACAGTTAGAAGTTAAATGGAATGGCTGTTTCTAGTTGAAAGAATGCAAATTTTGTTTGAAATCCTCCTATGTATCTTCAATCTATGGTTCTTGAATTTGGTTGCACAATTTCAATGGTTTAAAA

mRNA sequence

CCTCACTCTTCCCTTACTCCCTCACTATCAAACTCATAGCTAAAGTTCCAATTCTCTCGAAAATCCCAAATTAGGGTTCCTGATTTTCCTCTCTTTTCTCTCAAATTCCATCACTTTTCTCCGATTCAACGATGAGTTCCACCGGCAGTTCCACCAAGGGCGGCAGAGGAAAACCCAAAGCCACCAAATCCGTCTCCCGATCTCACAAAGCCGGCCTCCAGTTCCCCGTCGGTAGAATCGCTAGGTTTCTCAAGGCCGGGAAGTATGCCGAACGTGTCGGCGCTGGAGCTCCGGTCTACTTATCTGCCGTCCTCGAGTATCTCGCCGCTGAGGTTTTGGAGCTTGCTGGTAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATTGCTAATGGAGGTGTTTTGCCCAACATTCACCAGACTCTTTTGCCCAAAAAGGTTGGTAAAGATAAGGGTGATATTGGTTCTGCATCACAAGAATTTTAGAGATTTTAGGGTTTCTTTTGGTTTTCTTTTTTGGGGTTTGTTTCATTACTCGAGATGACAGTTCTTGTGATCTGTGAAATAGATGGGGTTTTGCTTCTGTGGCATTTGCTTCCTCTTACTGTACTTTGTCATCTTGACTTTGTTTCGATGCATATATTTTATATCCATGTGAGGTTGTTGGTGGATTTGATTCAAGAATGATGATGACCAACTCCCTTTTACAGTTAGAAGTTAAATGGAATGGCTGTTTCTAGTTGAAAGAATGCAAATTTTGTTTGAAATCCTCCTATGTATCTTCAATCTATGGTTCTTGAATTTGGTTGCACAATTTCAATGGTTTAAAA

Coding sequence (CDS)

ATGAGTTCCACCGGCAGTTCCACCAAGGGCGGCAGAGGAAAACCCAAAGCCACCAAATCCGTCTCCCGATCTCACAAAGCCGGCCTCCAGTTCCCCGTCGGTAGAATCGCTAGGTTTCTCAAGGCCGGGAAGTATGCCGAACGTGTCGGCGCTGGAGCTCCGGTCTACTTATCTGCCGTCCTCGAGTATCTCGCCGCTGAGGTTTTGGAGCTTGCTGGTAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATTGCTAATGGAGGTGTTTTGCCCAACATTCACCAGACTCTTTTGCCCAAAAAGGTTGGTAAAGATAAGGGTGATATTGGTTCTGCATCACAAGAATTTTAG

Protein sequence

MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKDKGDIGSASQEF

Homology

[Close]

BLAST of Bhi02G001773 vs. Swiss-Prot
Match: sp|O65759|H2AX_CICAR (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-65
Identity = 132/140 (94.29%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSST ++TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSST-ATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KG+IGSASQEF
Sbjct: 121 LLPKKVGKGKGEIGSASQEF 139

[Close]

BLAST of Bhi02G001773 vs. Swiss-Prot
Match: sp|Q9S9K7|H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-64
Identity = 132/140 (94.29%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 2   SSTGS-STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 61
           S  GS +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 3   SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62

Query: 62  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 121
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 63  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 122

Query: 122 LLPKKVGKDKGDIGSASQEF 141
           LLP KVGK+KGDIGSASQEF
Sbjct: 123 LLPSKVGKNKGDIGSASQEF 142

[Close]

BLAST of Bhi02G001773 vs. Swiss-Prot
Match: sp|O04848|H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-64
Identity = 131/141 (92.91%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 3   STGS---STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 62
           STG+   +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSA
Sbjct: 2   STGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSA 61

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 122
           VLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 62  VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121

Query: 123 TLLPKKVGKDKGDIGSASQEF 141
           TLLP KVGK+KGDIGSASQEF
Sbjct: 122 TLLPSKVGKNKGDIGSASQEF 142

[Close]

BLAST of Bhi02G001773 vs. Swiss-Prot
Match: sp|P35063|H2AX_PICAB (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.6e-63
Identity = 128/140 (91.43%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSS+G+  KGGRGK K+TKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AV
Sbjct: 1   MSSSGA--KGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ 
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQV 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK GKDKG+IGSASQEF
Sbjct: 121 LLPKKSGKDKGEIGSASQEF 138

[Close]

BLAST of Bhi02G001773 vs. Swiss-Prot
Match: sp|A2XLI0|H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012923 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-56
Identity = 119/137 (86.86%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 4   TGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 63
           + S   GGRGK K TK+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEY
Sbjct: 2   SSSQGGGGRGKAKTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEY 61

Query: 64  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 123
           LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q LLP
Sbjct: 62  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLP 121

Query: 124 KKVGKDKGDIGSASQEF 141
           KK G  KGDIGSASQEF
Sbjct: 122 KK-GGGKGDIGSASQEF 137

[Close]

BLAST of Bhi02G001773 vs. TAIR10
Match: AT1G54690.1 (gamma histone variant H2AX)

HSP 1 Score: 246.5 bits (628), Expect = 9.6e-66
Identity = 132/140 (94.29%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 2   SSTGS-STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 61
           S  GS +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 3   SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62

Query: 62  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 121
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 63  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 122

Query: 122 LLPKKVGKDKGDIGSASQEF 141
           LLP KVGK+KGDIGSASQEF
Sbjct: 123 LLPSKVGKNKGDIGSASQEF 142

[Close]

BLAST of Bhi02G001773 vs. TAIR10
Match: AT1G08880.1 (Histone superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-65
Identity = 131/141 (92.91%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 3   STGS---STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 62
           STG+   +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSA
Sbjct: 2   STGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSA 61

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 122
           VLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 62  VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121

Query: 123 TLLPKKVGKDKGDIGSASQEF 141
           TLLP KVGK+KGDIGSASQEF
Sbjct: 122 TLLPSKVGKNKGDIGSASQEF 142

[Close]

BLAST of Bhi02G001773 vs. TAIR10
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 198.0 bits (502), Expect = 3.9e-51
Identity = 106/124 (85.48%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 11  GRGKP----KATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 70
           GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKV 130
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Bhi02G001773 vs. TAIR10
Match: AT5G54640.1 (Histone superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-50
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 11  GRGKP----KATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 70
           GRGK      A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKV 130
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Bhi02G001773 vs. TAIR10
Match: AT1G51060.1 (histone H2A 10)

HSP 1 Score: 193.7 bits (491), Expect = 7.4e-50
Identity = 103/124 (83.06%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 11  GRGKP----KATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 70
           GRGK      A K+ +RS KAGLQFPVGRIARFLK GKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKV 130
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

[Close]

BLAST of Bhi02G001773 vs. TrEMBL
Match: tr|A0A1S3BQI1|A0A1S3BQI1_CUCME (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492212 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-68
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. TrEMBL
Match: tr|A0A0A0LW51|A0A0A0LW51_CUCSA (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G572950 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-68
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. TrEMBL
Match: tr|V4TA53|V4TA53_9ROSI (Histone H2A OS=Citrus clementina OX=85681 GN=CICLE_v10002804mg PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.1e-67
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KGDIGSASQEF
Sbjct: 121 LLPKKVGKGKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. TrEMBL
Match: tr|A0A2H5Q2I1|A0A2H5Q2I1_CITUN (Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_189470 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-66
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GK KGDIGSASQEF
Sbjct: 121 LLPKKMGKGKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. TrEMBL
Match: tr|A0A0B0NVE5|A0A0B0NVE5_GOSAR (Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_22140 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.0e-66
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GKDKG+IGSASQEF
Sbjct: 121 LLPKKMGKDKGEIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. NCBI nr
Match: XP_004135645.1 (PREDICTED: histone H2AX [Cucumis sativus] >XP_008450716.1 PREDICTED: histone H2AX [Cucumis melo] >KGN66125.1 Histone H2A [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 6.5e-68
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. NCBI nr
Match: XP_022154594.1 (probable histone H2AXb [Momordica charantia])

HSP 1 Score: 264.2 bits (674), Expect = 2.5e-67
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSS G STKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSAGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. NCBI nr
Match: XP_006433236.1 (histone H2AX [Citrus clementina] >XP_006471940.1 histone H2AX [Citrus sinensis] >ESR46476.1 hypothetical protein CICLE_v10002804mg [Citrus clementina])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KGDIGSASQEF
Sbjct: 121 LLPKKVGKGKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. NCBI nr
Match: GAY58772.1 (hypothetical protein CUMW_189470 [Citrus unshiu])

HSP 1 Score: 260.8 bits (665), Expect = 2.7e-66
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GK KGDIGSASQEF
Sbjct: 121 LLPKKMGKGKGDIGSASQEF 140

[Close]

BLAST of Bhi02G001773 vs. NCBI nr
Match: XP_016673688.1 (PREDICTED: histone H2AX-like [Gossypium hirsutum] >XP_017618295.1 PREDICTED: histone H2AX-like [Gossypium arboreum] >KHG15784.1 hypothetical protein F383_22140 [Gossypium arboreum] >PPR97664.1 hypothetical protein GOBAR_AA23011 [Gossypium barbadense])

HSP 1 Score: 259.6 bits (662), Expect = 6.1e-66
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSSTGSSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTG STKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GKDKG+IGSASQEF
Sbjct: 121 LLPKKMGKDKGEIGSASQEF 140

The following BLAST results are available for this feature:

BLAST of Bhi02G001773 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O65759\|H2AX_CICAR	7.8e-65	94.29	Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1	[more]
sp\|Q9S9K7\|H2AXB_ARATH	1.7e-64	94.29	Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1	[more]
sp\|O04848\|H2AXA_ARATH	3.0e-64	92.91	Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1	[more]
sp\|P35063\|H2AX_PICAB	5.6e-63	91.43	Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1	[more]
sp\|A2XLI0\|H2AXA_ORYSI	1.7e-56	86.86	Probable histone H2AXa OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012923 PE=3...	[more]

BLAST of Bhi02G001773 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54690.1	9.6e-66	94.29	gamma histone variant H2AX	[more]
AT1G08880.1	1.6e-65	92.91	Histone superfamily protein	[more]
AT4G27230.1	3.9e-51	85.48	histone H2A 2	[more]
AT5G54640.1	1.5e-50	84.68	Histone superfamily protein	[more]
AT1G51060.1	7.4e-50	83.06	histone H2A 10	[more]

BLAST of Bhi02G001773 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQI1\|A0A1S3BQI1_CUCME	4.3e-68	99.29	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492212 PE=3 SV=1	[more]
tr\|A0A0A0LW51\|A0A0A0LW51_CUCSA	4.3e-68	99.29	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G572950 PE=3 SV=1	[more]
tr\|V4TA53\|V4TA53_9ROSI	8.1e-67	97.86	Histone H2A OS=Citrus clementina OX=85681 GN=CICLE_v10002804mg PE=3 SV=1	[more]
tr\|A0A2H5Q2I1\|A0A2H5Q2I1_CITUN	1.8e-66	97.14	Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_189470 PE=3 SV=1	[more]
tr\|A0A0B0NVE5\|A0A0B0NVE5_GOSAR	4.0e-66	96.43	Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_22140 PE=3 SV=1	[more]

BLAST of Bhi02G001773 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135645.1	6.5e-68	99.29	PREDICTED: histone H2AX [Cucumis sativus] >XP_008450716.1 PREDICTED: histone H2A...	[more]
XP_022154594.1	2.5e-67	98.57	probable histone H2AXb [Momordica charantia]	[more]
XP_006433236.1	1.2e-66	97.86	histone H2AX [Citrus clementina] >XP_006471940.1 histone H2AX [Citrus sinensis] ...	[more]
GAY58772.1	2.7e-66	97.14	hypothetical protein CUMW_189470 [Citrus unshiu]	[more]
XP_016673688.1	6.1e-66	96.43	PREDICTED: histone H2AX-like [Gossypium hirsutum] >XP_017618295.1 PREDICTED: his...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR032458	Histone_H2A_CS
IPR032454	Histone_H2A_C
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR002119	Histone_H2A

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0008283	cell proliferation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0008150	biological_process
biological_process	GO:0006342	chromatin silencing
cellular_component	GO:0000790	nuclear chromatin
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005694	chromosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001773	Bhi02M001773	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 48..63 score: 84.58 coord: 77..91 score: 75.49 coord: 63..76 score: 89.46 coord: 19..41 score: 69.77 coord: 105..123 score: 70.23
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 8..128 e-value: 1.0E-76 score: 270.9
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 13..125 e-value: 5.85888E-66 score: 197.558
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 9..94 e-value: 9.5E-15 score: 55.0
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 7..133 e-value: 9.4E-61 score: 205.2
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 22..125
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 97..130 e-value: 2.9E-18 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR23430:SF207	SUBFAMILY NOT NAMED	coord: 5..139
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 5..139
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 27..33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G001773	Csa1G572950	Cucumber (Chinese Long) v2	cuwgoB108
Bhi02G001773	MELO3C015363	Melon (DHL92) v3.5.1	mewgoB314
Bhi02G001773	ClCG03G016620	Watermelon (Charleston Gray)	wcgwgoB365
Bhi02G001773	CSPI01G27050	Wild cucumber (PI 183967)	cpiwgoB110
Bhi02G001773	Cucsa.163750	Cucumber (Gy14) v1	cgywgoB328
Bhi02G001773	CmaCh10G011090	Cucurbita maxima (Rimu)	cmawgoB0079
Bhi02G001773	CmoCh10G011920	Cucurbita moschata (Rifu)	cmowgoB0073
Bhi02G001773	CmoCh11G011440	Cucurbita moschata (Rifu)	cmowgoB0155
Bhi02G001773	Lsi06G001690	Bottle gourd (USVL1VR-Ls)	lsiwgoB529
Bhi02G001773	Cp4.1LG04g00730	Cucurbita pepo (Zucchini)	cpewgoB0888
Bhi02G001773	Cp4.1LG18g00560	Cucurbita pepo (Zucchini)	cpewgoB0470
Bhi02G001773	CsGy1G026230	Cucumber (Gy14) v2	cgybwgoB101
Bhi02G001773	MELO3C015363.2	Melon (DHL92) v3.6.1	medwgoB312
Bhi02G001773	CsaV3_1G039370	Cucumber (Chinese Long) v3	cucwgoB113
Bhi02G001773	Cla011310	Watermelon (97103) v1	wgowmB658
Bhi02G001773	Cla97C03G066930	Watermelon (97103) v2	wgowmbB633

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001773	Cucumber (Gy14) v2	cgybwgoB080
Bhi02G001773	Cucurbita maxima (Rimu)	cmawgoB0164
Bhi02G001773	Cucurbita moschata (Rifu)	cmowgoB0167
Bhi02G001773	Wild cucumber (PI 183967)	cpiwgoB084
Bhi02G001773	Cucumber (Chinese Long) v3	cucwgoB090
Bhi02G001773	Cucumber (Chinese Long) v2	cuwgoB082
Bhi02G001773	Melon (DHL92) v3.6.1	medwgoB295
Bhi02G001773	Melon (DHL92) v3.6.1	medwgoB307
Bhi02G001773	Melon (DHL92) v3.5.1	mewgoB294
Bhi02G001773	Melon (DHL92) v3.5.1	mewgoB308
Bhi02G001773	Watermelon (Charleston Gray)	wcgwgoB363
Bhi02G001773	Watermelon (97103) v2	wgowmbB631
Bhi02G001773	Watermelon (97103) v2	wgowmbB634
Bhi02G001773	Watermelon (97103) v1	wgowmB657
Bhi02G001773	Watermelon (97103) v1	wgowmB654