Cla97C03G066930 (gene) Watermelon (97103) v2

NameCla97C03G066930
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionHistone H2A
LocationCla97Chr03 : 30419830 .. 30420366 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCCACCGGCGGTTCCACCAAAGGAGGCAGAGGAAAGCCCAAAGCCACCAAATCCGTCTCCCGATCGCACAAAGCCGGCCTCCAGTTCCCCGTCGGCAGAATCGCAAGGTTTCTCAAGGCCGGAAAGTACGCTGAACGTGTCGGCGCTGGAGCTCCAGTCTACTTATCCGCCGTCCTCGAGTATCTCGCCGCTGAGGTAATAACAACATCCGTTCTCTTTCTTTTTTTCTAACTGATTCCGATGGAATTCTGTTTCGATTTTGTGCGATAGATCTCTAATTTTCTATCCATTGATTTCAATCGGAATTAGGTTTTGGAACTTGCTGGGAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATCGCTAATGGAGGTGTTTTGCCCAATATTCACCAAACTCTTTTGCCTAAAAAAGTTGGTAAAGATAAGGGTGACATTGGTTCTGCATCACAGGAATTTTAG

mRNA sequence

ATGAGTTCCACCGGCGGTTCCACCAAAGGAGGCAGAGGAAAGCCCAAAGCCACCAAATCCGTCTCCCGATCGCACAAAGCCGGCCTCCAGTTCCCCGTCGGCAGAATCGCAAGGTTTCTCAAGGCCGGAAAGTACGCTGAACGTGTCGGCGCTGGAGCTCCAGTCTACTTATCCGCCGTCCTCGAGTATCTCGCCGCTGAGGTTTTGGAACTTGCTGGGAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATCGCTAATGGAGGTGTTTTGCCCAATATTCACCAAACTCTTTTGCCTAAAAAAGTTGGTAAAGATAAGGGTGACATTGGTTCTGCATCACAGGAATTTTAG

Coding sequence (CDS)

ATGAGTTCCACCGGCGGTTCCACCAAAGGAGGCAGAGGAAAGCCCAAAGCCACCAAATCCGTCTCCCGATCGCACAAAGCCGGCCTCCAGTTCCCCGTCGGCAGAATCGCAAGGTTTCTCAAGGCCGGAAAGTACGCTGAACGTGTCGGCGCTGGAGCTCCAGTCTACTTATCCGCCGTCCTCGAGTATCTCGCCGCTGAGGTTTTGGAACTTGCTGGGAATGCTGCTAGAGACAACAAAAAGAATCGTATTGTACCGAGGCATATTCAGCTTGCAGTGAGAAACGATGAGGAATTGAGTAAGCTTTTGGGATCTGTAACCATCGCTAATGGAGGTGTTTTGCCCAATATTCACCAAACTCTTTTGCCTAAAAAAGTTGGTAAAGATAAGGGTGACATTGGTTCTGCATCACAGGAATTTTAG

Protein sequence

MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKDKGDIGSASQEF
BLAST of Cla97C03G066930 vs. NCBI nr
Match: XP_004135645.1 (PREDICTED: histone H2AX [Cucumis sativus] >XP_008450716.1 PREDICTED: histone H2AX [Cucumis melo] >KGN66125.1 Histone H2A [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. NCBI nr
Match: XP_022154594.1 (probable histone H2AXb [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 5.0e-68
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSS GGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSAGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. NCBI nr
Match: XP_006433236.1 (histone H2AX [Citrus clementina] >XP_006471940.1 histone H2AX [Citrus sinensis] >ESR46476.1 hypothetical protein CICLE_v10002804mg [Citrus clementina])

HSP 1 Score: 264.2 bits (674), Expect = 2.5e-67
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KGDIGSASQEF
Sbjct: 121 LLPKKVGKGKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. NCBI nr
Match: GAY58772.1 (hypothetical protein CUMW_189470 [Citrus unshiu])

HSP 1 Score: 263.1 bits (671), Expect = 5.5e-67
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GK KGDIGSASQEF
Sbjct: 121 LLPKKMGKGKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. NCBI nr
Match: XP_016673688.1 (PREDICTED: histone H2AX-like [Gossypium hirsutum] >XP_017618295.1 PREDICTED: histone H2AX-like [Gossypium arboreum] >KHG15784.1 hypothetical protein F383_22140 [Gossypium arboreum] >PPR97664.1 hypothetical protein GOBAR_AA23011 [Gossypium barbadense])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GKDKG+IGSASQEF
Sbjct: 121 LLPKKMGKDKGEIGSASQEF 140

BLAST of Cla97C03G066930 vs. TrEMBL
Match: tr|A0A1S3BQI1|A0A1S3BQI1_CUCME (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492212 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.6e-69
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. TrEMBL
Match: tr|A0A0A0LW51|A0A0A0LW51_CUCSA (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G572950 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.6e-69
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGKDKGDIGSASQEF
Sbjct: 121 LLPKKVGKDKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. TrEMBL
Match: tr|V4TA53|V4TA53_9ROSI (Histone H2A OS=Citrus clementina OX=85681 GN=CICLE_v10002804mg PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.6e-67
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KGDIGSASQEF
Sbjct: 121 LLPKKVGKGKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. TrEMBL
Match: tr|A0A2H5Q2I1|A0A2H5Q2I1_CITUN (Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_189470 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.6e-67
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GK KGDIGSASQEF
Sbjct: 121 LLPKKMGKGKGDIGSASQEF 140

BLAST of Cla97C03G066930 vs. TrEMBL
Match: tr|A0A0B0NVE5|A0A0B0NVE5_GOSAR (Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_22140 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.1e-67
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSSTGGSTKGGRGKPKA+KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK+GKDKG+IGSASQEF
Sbjct: 121 LLPKKMGKDKGEIGSASQEF 140

BLAST of Cla97C03G066930 vs. Swiss-Prot
Match: sp|Q9S9K7|H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-65
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MSSTGGS--TKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60
           MSS  GS  TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS
Sbjct: 1   MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60

Query: 61  AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120
           AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120

Query: 121 QTLLPKKVGKDKGDIGSASQEF 141
           QTLLP KVGK+KGDIGSASQEF
Sbjct: 121 QTLLPSKVGKNKGDIGSASQEF 142

BLAST of Cla97C03G066930 vs. Swiss-Prot
Match: sp|O04848|H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-65
Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0

Query: 3   STG---GSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 62
           STG   G+TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSA
Sbjct: 2   STGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSA 61

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 122
           VLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 62  VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121

Query: 123 TLLPKKVGKDKGDIGSASQEF 141
           TLLP KVGK+KGDIGSASQEF
Sbjct: 122 TLLPSKVGKNKGDIGSASQEF 142

BLAST of Cla97C03G066930 vs. Swiss-Prot
Match: sp|O65759|H2AX_CICAR (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-65
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSST  +TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSST-ATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT
Sbjct: 61  LEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKKVGK KG+IGSASQEF
Sbjct: 121 LLPKKVGKGKGEIGSASQEF 139

BLAST of Cla97C03G066930 vs. Swiss-Prot
Match: sp|P35063|H2AX_PICAB (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.3e-63
Identity = 128/140 (91.43%), Postives = 133/140 (95.00%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSS+G   KGGRGK K+TKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AV
Sbjct: 1   MSSSG--AKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ 
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQV 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK GKDKG+IGSASQEF
Sbjct: 121 LLPKKSGKDKGEIGSASQEF 138

BLAST of Cla97C03G066930 vs. Swiss-Prot
Match: sp|A2XLI0|H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012923 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.0e-57
Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 1   MSSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60
           MSS+ G   GGRGK K TK+VSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAV
Sbjct: 1   MSSSQGG--GGRGKAKTTKAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120
           LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS+LLG+VTIA GGVLPNI Q 
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQV 120

Query: 121 LLPKKVGKDKGDIGSASQEF 141
           LLPKK G  KGDIGSASQEF
Sbjct: 121 LLPKK-GGGKGDIGSASQEF 137

BLAST of Cla97C03G066930 vs. TAIR10
Match: AT1G54690.1 (gamma histone variant H2AX)

HSP 1 Score: 248.8 bits (634), Expect = 1.9e-66
Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MSSTGGS--TKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60
           MSS  GS  TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS
Sbjct: 1   MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60

Query: 61  AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120
           AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120

Query: 121 QTLLPKKVGKDKGDIGSASQEF 141
           QTLLP KVGK+KGDIGSASQEF
Sbjct: 121 QTLLPSKVGKNKGDIGSASQEF 142

BLAST of Cla97C03G066930 vs. TAIR10
Match: AT1G08880.1 (Histone superfamily protein)

HSP 1 Score: 248.1 bits (632), Expect = 3.3e-66
Identity = 132/141 (93.62%), Postives = 135/141 (95.74%), Query Frame = 0

Query: 3   STG---GSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 62
           STG   G+TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSA
Sbjct: 2   STGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSA 61

Query: 63  VLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 122
           VLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ
Sbjct: 62  VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121

Query: 123 TLLPKKVGKDKGDIGSASQEF 141
           TLLP KVGK+KGDIGSASQEF
Sbjct: 122 TLLPSKVGKNKGDIGSASQEF 142

BLAST of Cla97C03G066930 vs. TAIR10
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-51
Identity = 106/124 (85.48%), Postives = 108/124 (87.10%), Query Frame = 0

Query: 11  GRGKP----KATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 70
           GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKV 130
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

BLAST of Cla97C03G066930 vs. TAIR10
Match: AT5G54640.1 (Histone superfamily protein)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-50
Identity = 106/125 (84.80%), Postives = 108/125 (86.40%), Query Frame = 0

Query: 6   GSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 65
           G T G  G  KAT   SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLA
Sbjct: 5   GKTLGSGGAKKAT---SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLA 64

Query: 66  AEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 125
           AEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK
Sbjct: 65  AEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 124

Query: 126 VGKDK 131
            G  K
Sbjct: 125 AGASK 126

BLAST of Cla97C03G066930 vs. TAIR10
Match: AT1G51060.1 (histone H2A 10)

HSP 1 Score: 194.1 bits (492), Expect = 5.7e-50
Identity = 103/124 (83.06%), Postives = 107/124 (86.29%), Query Frame = 0

Query: 11  GRGKP----KATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 70
           GRGK      A K+ +RS KAGLQFPVGRIARFLK GKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKV 130
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004135645.11.3e-68100.00PREDICTED: histone H2AX [Cucumis sativus] >XP_008450716.1 PREDICTED: histone H2A... [more]
XP_022154594.15.0e-6899.29probable histone H2AXb [Momordica charantia][more]
XP_006433236.12.5e-6798.57histone H2AX [Citrus clementina] >XP_006471940.1 histone H2AX [Citrus sinensis] ... [more]
GAY58772.15.5e-6797.86hypothetical protein CUMW_189470 [Citrus unshiu][more]
XP_016673688.11.2e-6697.14PREDICTED: histone H2AX-like [Gossypium hirsutum] >XP_017618295.1 PREDICTED: his... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BQI1|A0A1S3BQI1_CUCME8.6e-69100.00Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492212 PE=3 SV=1[more]
tr|A0A0A0LW51|A0A0A0LW51_CUCSA8.6e-69100.00Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G572950 PE=3 SV=1[more]
tr|V4TA53|V4TA53_9ROSI1.6e-6798.57Histone H2A OS=Citrus clementina OX=85681 GN=CICLE_v10002804mg PE=3 SV=1[more]
tr|A0A2H5Q2I1|A0A2H5Q2I1_CITUN3.6e-6797.86Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_189470 PE=3 SV=1[more]
tr|A0A0B0NVE5|A0A0B0NVE5_GOSAR8.1e-6797.14Histone H2A OS=Gossypium arboreum OX=29729 GN=F383_22140 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q9S9K7|H2AXB_ARATH3.5e-6594.37Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1[more]
sp|O04848|H2AXA_ARATH6.0e-6593.62Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1[more]
sp|O65759|H2AX_CICAR7.8e-6594.29Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1[more]
sp|P35063|H2AX_PICAB4.3e-6391.43Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1[more]
sp|A2XLI0|H2AXA_ORYSI6.0e-5787.14Probable histone H2AXa OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012923 PE=3... [more]
Match NameE-valueIdentityDescription
AT1G54690.11.9e-6694.37gamma histone variant H2AX[more]
AT1G08880.13.3e-6693.62Histone superfamily protein[more]
AT4G27230.13.0e-5185.48histone H2A 2[more]
AT5G54640.11.1e-5084.80Histone superfamily protein[more]
AT1G51060.15.7e-5083.06histone H2A 10[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR032458Histone_H2A_CS
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR002119Histone_H2A
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0008283 cell proliferation
biological_process GO:0008150 biological_process
biological_process GO:0006342 chromatin silencing
biological_process GO:0006325 chromatin organization
cellular_component GO:0005694 chromosome
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005730 nucleolus
cellular_component GO:0000790 nuclear chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G066930.1Cla97C03G066930.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 48..63
score: 84.58
coord: 77..91
score: 75.49
coord: 63..76
score: 89.46
coord: 19..41
score: 69.77
coord: 105..123
score: 70.23
IPR002119Histone H2ASMARTSM00414h2a4coord: 8..128
e-value: 1.0E-76
score: 270.9
IPR002119Histone H2ACDDcd00074H2Acoord: 13..125
e-value: 6.53265E-66
score: 197.558
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 7..133
e-value: 9.4E-61
score: 205.2
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 22..125
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 13..94
e-value: 1.2E-14
score: 54.7
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 97..130
e-value: 2.9E-18
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 6..139
NoneNo IPR availablePANTHERPTHR23430:SF207SUBFAMILY NOT NAMEDcoord: 6..139
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 27..33