CsaV3_2G009960 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G009960
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 6542587 .. 6542805 (+)
RNA-Seq ExpressionCsaV3_2G009960
SyntenyCsaV3_2G009960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACGTCGAAAATATCATCGGCTAGAACATTGGCAGTATTACGTCTAGAGAACTTTTTTCGAGGCGCTAAAGGGACGATGTCCGAACAACCTCATCCCCGACATAGTCCATGTCGATGTGTGATAGACGTTGGCAATGGACTATTCCTGATGCGACCTCTGTGCGTTGGGAGTAAACAAATCCTAATGCAACATCGGGAAAAGTTTCCCACATGA

mRNA sequence

ATGCCGACGTCGAAAATATCATCGGCTAGAACATTGGCAGTATTACGTCTAGAGAACTTTTTTCGAGGCGCTAAAGGGACGATGTCCGAACAACCTCATCCCCGACATAGTCCATGTCGATGTGTGATAGACGTTGGCAATGGACTATTCCTGATGCGACCTCTGTGCGTTGGGAGTAAACAAATCCTAATGCAACATCGGGAAAAGTTTCCCACATGA

Coding sequence (CDS)

ATGCCGACGTCGAAAATATCATCGGCTAGAACATTGGCAGTATTACGTCTAGAGAACTTTTTTCGAGGCGCTAAAGGGACGATGTCCGAACAACCTCATCCCCGACATAGTCCATGTCGATGTGTGATAGACGTTGGCAATGGACTATTCCTGATGCGACCTCTGTGCGTTGGGAGTAAACAAATCCTAATGCAACATCGGGAAAAGTTTCCCACATGA

Protein sequence

MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSKQILMQHREKFPT*
Homology
[Close]
BLAST of CsaV3_2G009960 vs. NCBI nr
Match: KGN61293.1 (hypothetical protein Csa_006352 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK 60
          MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK
Sbjct: 1  MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK 60

Query: 61 QILMQHREKFPT 73
          QILMQHREKFPT
Sbjct: 61 QILMQHREKFPT 72

[Close]
BLAST of CsaV3_2G009960 vs. ExPASy TrEMBL
Match: A0A0A0LHL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G076010 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.9e-35
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK 60
          MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK
Sbjct: 1  MPTSKISSARTLAVLRLENFFRGAKGTMSEQPHPRHSPCRCVIDVGNGLFLMRPLCVGSK 60

Query: 61 QILMQHREKFPT 73
          QILMQHREKFPT
Sbjct: 61 QILMQHREKFPT 72

The following BLAST results are available for this feature:
BLAST of CsaV3_2G009960 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61293.11.6e-34100.00hypothetical protein Csa_006352 [Cucumis sativus][more]
BLAST of CsaV3_2G009960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G009960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHL97.9e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G076010 PE=4 SV=1[more]
BLAST of CsaV3_2G009960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G009960.1CsaV3_2G009960.1mRNA