CsaV3_6G039600 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGTGGAAAAGTTGTATATTTGATAATAAATTAACAAGGAAAAACATAGTTTGAGAGAAGTCCTATAGATATATAAAAACATGAACCTTTGAGATGGGGTCCAAAGAAATGTAAAATAAAAGATGGGTTGTTTTGAGAAAATGGGTAAAAACCAAAAAAGACATCGTCTTTGTGTTTGTGTGTGTGTGTGTGTTTTGTGGTAGTGGGTGGTGTAAATGAGAGGGGGAGAGAGAGAGAGGATGGTGGTCCACGCGTGCGAAGGTGTGAAGGTGGGCGTACGAGCGTGGTAAGGTACTAGCAGTCACGTGCGAGGAAGTTTATATATACCAATACCCACTGAGAAAGGAGAAAGGAAAGAGAAAGAAAGAAAAAAGAGAGGGAAGAGAGTGGTGGCGTAGAAGCAGAAAAGGGTGTGGCCTTTGCCTTTCATATTTTTTTTTGTATTCTTCTGTGCACACACTCTTTGTATCCAGTTGTTGGGGAAACATATACACACAGAACAAACAACAATTTCATTCCTTTTTTTTTTTTTTCTTTTCTGAAAAAGCAAAACCCCATTTTCATTTGTTTTTGTCACTCAACAAAACCAACCAAATAAGGGGGATTTGTAGAGGATTCATGGAGGTTGAGAATGAAATGAGGCAATCCAAGTTCAGAAGAATTTGTGTGTTTTGTGGTAGTAGTCAAGGCAGGAAAAGTAGCTACCAAGATGCTGCCATTGACCTTGGCAATGAATTGGTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTACTTCAACAAATCTCAATCAATCCTTGTTTTTCATCACTTTTCTCAACTGGGTTTTTCTTTAAAGTTAGTGTTGTTTAGTCTTTTCTGTGTGTTCTCTTTCTCTGCCTCTCAATGTGACTCCTCTGTTTTGCTTTTATTTCTTGTTTTTCTTCTTTGTCAGGAATCATTTTACTTTCATTTTTCGTTTATTTTATTTAACTCATTGTCCTAAAATGGTTGTTTTTATTTTTACCATATTCGTCTCCTTCTCCTACTTCTTTTCTTGTCTATTCTGATTCCTCTGTTTTCTGTCATAACCTGTCAATCAAAACCCTCCTTTAGTTTTCTTTCCTTTTGTTTTTTCTGTCATTTAAATGACTTCAACTTAAACATTTCTTTTTCTTTTTTCTCGGTGGGGAGCTACAAACTATTTACTAACTAACCCTCTGTTCATCCTTCGCTTTTTGGAACTTTCCTATCCTTTTGTATATTTATCTTTAATTTTTTCTGAAGGTTTCGAGGAACATAAATCTGGTGTATGGAGGAGGAAGCATAGGGCTAATGGGTTTGGTTTCACAAGCTGTTCATGGAGGTGGAGGACATGTTATAGGGTAAGTCTAAGACTAGTTTTTTTCTTTTTGAAAATTTTGATAATACCCAGTGAAGAAAAGAAGAGTGAAAAGACAAGAATGATGAGTGATCAAGGAAGGAGGGGAAATTATTATTGAGGTTGTTCTGTTTTTAGGCCTTTGATTTTTTTTTTTTCTTATAAATAAATAACTAATTTTTGTCTTCTTGTTGTTTTTTTCCCTTCTCAGAGTCATTCCCAAGACACTCATGCCTCGAGAGGTATGTCTGCTACTGCTAAAAAACACAATTAACCTTTTCAAATTATACCAAATATATAGATTCAATATAGCCTTTATTACCTCACTTTTTCTCTGAGCTGATGTTTTAAGACTTTCACTAATTTTATTTTTCACACTTTTTTTGTTTGTTTTCAATTTTCATAGCCACTTTCTTCTTCCCCTTCTCGCTGATTGAAACCCTCCATTCATCTGTGTTTTACTCTTTGTTATATTTCCAAGTGGTTTTCAATCTCAAGAATGGTTGTCTCTTTTGTGGGCACTTGTGGCCTTATCTACGTACCAATTCACTTGAGTATTTAGCACCAATAAAAAATGGTTGGCTACAGTTGGAGACATAAATATTTGGGATCTTCTGTTTGCTATTTTGAATGATTCTATGTCAACTCCCTTCGATCAGTTGCGCTAATATGAGTATTTGTTCCATTGTTTTTTATTCCTTGGCATTTTCCTACTTGTGAACATTTTCTTTTGTTTTATCTTCTTGTGAGCTTGAAAATTGTGGCTAGGGAATATCTGACCAAGAAATTATTCCTGCAACACACATCATTACTTTACTGCAAAACTCTCTCTCTCCATTAAAAAATTTTCAATTTCTTTTTTTCTTGGCTATGTTTGTTTCCTTTTGCAGCTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTTGCAGATATGCATCAAAGGAAGGCTGAAATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCTGGTGAGTACAATATAATCCTCTCACCATTTCCTTTTGCACTGCAATATTGATGGATATTTGGTAAACATAACGCTCCTCTGGTGTTTCTTTTTTCCTGCTTATCAGAGCATTTATAAGACTTTACTTTCCAATGACAGCCAAAACCAAAACCCTTCTCTAATTTGAACTCTCTCTGTGTTAATTTATGTAAAAGTGGATAGAACCATTAACTGCAAAGTGAATAGTACTCTTCGTTCTTTGATTTTGGATTTAGCCTGTCTTGAAAAGTTCCAGGTGTCTTTAGCTGAATATCTTTGTTCAAAGAGGGTAAGGAAATGGAAAGGGAGAACAACCAAAAAAAGGAGGGGAAAAAAAGGAAAAAAGAGGATTTATTTTGCTTTCGGTGCTAGCACTTTTTATGGTTAAGTCCATTGAAAGCTCTAGTTCAGTCCCTTTCTAGTATTGAAGCAAAGAATCTGTTTCTTTTTCTTTTGTTTTGTTTTGTTTTTTTTTTTCCTTTTTTCCTTTCGTTCTATTTTTCTTTTCAAGTCAAACTGAGCGTTATCTTTTACTTCAATGGCTTCTGTTTGGCTCTAAGCTCTTTAGCTTGCTAGTCATAATTACTCATCAACAACCTCTCACGAACCCCAAGACACAATGATTATTGTCTAGCCTTTCAAACCCTAAACTCTTGACTACTAATGACCCATCAACATCTTACACTGAAAAATAGAGTTACTGAAATCCTCCAATCTCTGTGATAGAATTACTCACCCTTTCCCACATTGTTGTCTCATAACCTTGATCTTACAGTTCAAAATTGTACTCTAATGGCATTTAACCAACAAAAGGCACCTCATCTTACAGTTTAAAGATGTGGATTTTACTTTCAGTCGGTAAGGCCCAGTAAAAATTGGCATTGAATTGATAAATAAATTAAAAATGTTTGATATCTTTTTCTTTTGTTTTTTTGTTTTTGTTTTTGTTGGGGGGAGGGTGGTTTTCCCATAAATGGAAAACTAAAAAGGTGACCAACTGGAAGGTTTGGACCCATCAGATTGTCAAACTGAAAGCTAACTGATACCAAATATATACTAAAAATTATTACCCAAGGATAGGATTCTCCTGCGCTCTATATATCTATATTCCTGTACTGAAATTACTTACCAATTAATGCTGAAGAAAATAATTGAATTTTCAATATGTAGAACTCGCAAGTTGGTAAATAATCCAGCTGTCTTTTTATTGTAAAGTATATTTAATTGATTTGATAATGAAGGATTCAAATGTTTCTTACAGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTAAACTGCACCCTTTGCAAATTTTTTTTTTCTTTTTTTTTAATTAATCCAAATCATATATATCCTTTTTGTTCATATTTTGATGGTTTGGTAACTTCTTCAGTTGGGTGGGGAATTGACAAGGTGCAAATTATTTCAAATTTTGCAGGTGGGTTTGCTGAATGTCGATGGATACTATAATTCCTTGCTGTCATTTATTGACAAAGCTGTGGAGGAAGGATTCATCAGTCCAAGTGCACGTGAAATCATCCTATCCGCTCCCACGGCAAAGGAGTTGATGATGAAATTGGAGGTATTTTCTTTACCTTAACAACTTTCTTTCCAAATCATTTACATTGCTTTAATGCCTGGAAGGGAGTGGTATTCTGCAGTCTTCTTCATTTCTTGGATTAAATGAATATCTCAAGAAAAACATGTTTGTTTCCTAAGAAAAGAAAGAGACAAGGCATTTATACTGTTGTGTGAAAAATGGAGGCTCTCTCTCTCTCTCTCTGTATCTGTCATGTTCTAATAGTAACTGTTGATTGGTTTGCTTGTAGGAGTATGCACCTTGTCATGAAAGAGCTGCTTTAAAGTTGAACTGGGAAATAGAGCAGCTTGGCTATCTCTAGGAAGGATATAGAATGGCAGAAGGAGGAAAAGATGGAATCTGAATTTTGAAGCTCTAAATTTCTATTTTGGGGGATTCTTTTTTTTGTAAATTACTGCAAATTGACCTCAGTAAATGAAGTTTGCTATATTTCCTTCATTATGAAACACTAATTTCCTTTTGAAATTGTAAGTAAACGAGGTTGATGAAGGTTTCCCCTCTGAGAATGGGCTATCTACTAACTTGAGAGAAAAAAAAAAGGAGAAAAGAAGAAAAAGAAAGAAATGTTTTGCAAGTGTTTCATCAATTATTGTTCTCTCCATGTCTCTGTCTCTGTAAGCTAACAGGAAACCTCCATTATCATTTCATTATCCATCTGGGTATTGGTAAGAAATGTTATTGATTTCAGATATTTTGTTATTTCAAGATTGGAACATGAAACATGTCAGTTCTAACTTCCAACTTGTCTTGTCAACTGAAATTATGACATCAACACATCTCTCTTTTAAAATGGCCATAGAAACAGATCAAACTCAC ATGGAGGTTGAGAATGAAATGAGGCAATCCAAGTTCAGAAGAATTTGTGTGTTTTGTGGTAGTAGTCAAGGCAGGAAAAGTAGCTACCAAGATGCTGCCATTGACCTTGGCAATGAATTGGTTTCGAGGAACATAAATCTGGTGTATGGAGGAGGAAGCATAGGGCTAATGGGTTTGGTTTCACAAGCTGTTCATGGAGGTGGAGGACATGTTATAGGAGTCATTCCCAAGACACTCATGCCTCGAGAGCTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTTGCAGATATGCATCAAAGGAAGGCTGAAATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCTGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTGGGTTTGCTGAATGTCGATGGATACTATAATTCCTTGCTGTCATTTATTGACAAAGCTGTGGAGGAAGGATTCATCAGTCCAAGTGCACGTGAAATCATCCTATCCGCTCCCACGGCAAAGGAGTTGATGATGAAATTGGAGGAGTATGCACCTTGTCATGAAAGAGCTGCTTTAAAGTTGAACTGGGAAATAGAGCAGCTTGGCTATCTCTAG ATGGAGGTTGAGAATGAAATGAGGCAATCCAAGTTCAGAAGAATTTGTGTGTTTTGTGGTAGTAGTCAAGGCAGGAAAAGTAGCTACCAAGATGCTGCCATTGACCTTGGCAATGAATTGGTTTCGAGGAACATAAATCTGGTGTATGGAGGAGGAAGCATAGGGCTAATGGGTTTGGTTTCACAAGCTGTTCATGGAGGTGGAGGACATGTTATAGGAGTCATTCCCAAGACACTCATGCCTCGAGAGCTAACTGGTGAAACAGTAGGGGAAGTGAAGGCAGTTGCAGATATGCATCAAAGGAAGGCTGAAATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCTGGTGGTTATGGAACTTTAGAGGAGTTGCTTGAAGTAATTACTTGGGCTCAGCTTGGAATTCATGATAAACCTGTGGGTTTGCTGAATGTCGATGGATACTATAATTCCTTGCTGTCATTTATTGACAAAGCTGTGGAGGAAGGATTCATCAGTCCAAGTGCACGTGAAATCATCCTATCCGCTCCCACGGCAAAGGAGTTGATGATGAAATTGGAGGAGTATGCACCTTGTCATGAAAGAGCTGCTTTAAAGTTGAACTGGGAAATAGAGCAGCTTGGCTATCTCTAG MEVENEMRQSKFRRICVFCGSSQGRKSSYQDAAIDLGNELVSRNINLVYGGGSIGLMGLVSQAVHGGGGHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPSAREIILSAPTAKELMMKLEEYAPCHERAALKLNWEIEQLGYL* Homology
BLAST of CsaV3_6G039600 vs. NCBI nr
Match: XP_004143250.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis sativus] >XP_008449247.1 PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo] >KAE8647393.1 hypothetical protein Csa_003416 [Cucumis sativus]) HSP 1 Score: 421.4 bits (1082), Expect = 4.6e-114 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. NCBI nr
Match: XP_038883317.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Benincasa hispida]) HSP 1 Score: 416.0 bits (1068), Expect = 1.9e-112 Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. NCBI nr
Match: XP_022979089.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucurbita maxima]) HSP 1 Score: 411.4 bits (1056), Expect = 4.8e-111 Identity = 205/211 (97.16%), Postives = 208/211 (98.58%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. NCBI nr
Match: XP_022925645.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucurbita moschata] >XP_023543210.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110 Identity = 204/211 (96.68%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. NCBI nr
Match: XP_022143714.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Momordica charantia]) HSP 1 Score: 407.9 bits (1047), Expect = 5.3e-110 Identity = 204/211 (96.68%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104 Identity = 188/211 (89.10%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 6.1e-101 Identity = 184/211 (87.20%), Postives = 198/211 (93.84%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 3.2e-94 Identity = 170/201 (84.58%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 4.0e-92 Identity = 165/202 (81.68%), Postives = 184/202 (91.09%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 5.2e-92 Identity = 164/202 (81.19%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy TrEMBL
Match: A0A1S3BKZ9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103491183 PE=3 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.2e-114 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy TrEMBL
Match: A0A6J1IVQ4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111478831 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.3e-111 Identity = 205/211 (97.16%), Postives = 208/211 (98.58%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy TrEMBL
Match: A0A6J1EIR7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111432999 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 6.8e-111 Identity = 204/211 (96.68%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy TrEMBL
Match: A0A6J1CQ55 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111013555 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.6e-110 Identity = 204/211 (96.68%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. ExPASy TrEMBL
Match: A0A6J1I6Y3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111471299 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.1e-108 Identity = 202/213 (94.84%), Postives = 207/213 (97.18%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 380.6 bits (976), Expect = 8.4e-106 Identity = 188/211 (89.10%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 368.2 bits (944), Expect = 4.3e-102 Identity = 184/211 (87.20%), Postives = 198/211 (93.84%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 364.8 bits (935), Expect = 4.8e-101 Identity = 187/235 (79.57%), Postives = 202/235 (85.96%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 345.9 bits (886), Expect = 2.3e-95 Identity = 170/201 (84.58%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of CsaV3_6G039600 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 322.0 bits (824), Expect = 3.6e-88 Identity = 159/207 (76.81%), Postives = 182/207 (87.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|