CsaV3_6G045640 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G045640
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Exonuclease domain-containing protein
Location	chr6: 27036934 .. 27038126 (-)
RNA-Seq Expression	CsaV3_6G045640
Synteny	CsaV3_6G045640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGGATATGGAGGCTTCAAGTTCATTCAAAGAAGGTGCAGCTGAGATTGTATTTTTCGACTTGGAAACTACCGTACCCAAAAGAGTTGGGCAACGGTTTCGAGTATTGGAATTTGGTGCTATTGTTGTCTGCCCAATGAAACTTGTAGAGCTCGAGAGCTTTACTACTCTCATTAGGCCAACGGATTTATCTGCTGTTGCGTTGAGGTCTAGCCGACCTGACGGAATAACTAGAGCAGCTGTTGCAACTGCACCATTGTTTGAGGAAGTGGCTGACAAGATATTCAGCATTTTGAATGGAAGGATATGGGCAGGTCACAACATTCGAAGATTCGACTGTGTTCGTATTAAGGAGGCATTTGCAGAGATTGGCAGGCCTGCTCCTATCCCAGTTGGGATGGTTGATTCTTTAGGAGTCTTAACGAACAAATTTGGCAAGAGAGCCGGGAACATGAAGGTGAGAAATAACGAACTTTTGAACCTTGAAAACCATAACATATAGCATACAACGTTTGGCAAAATAGTTCTCATATATTTTGAACTGTTTTATATTTAGATGGCATCATTGGCTTCTTACTTTCAGTTGGGACAGCAAAAGCACAGGTATCAATACAATTGATCGACTCCCTTCTTTGTATGTGTTAACTTGTATCATCTTAGTTCACAAACTGACAAAAGTATTTTTGTGCAGGAGCCTCGACGATGTTCGTATGAACTTGGAGGTTCTCAAACATTGTGCTACTGTTCTATTTCTGGTATGTATACAAAAATTTCTACCACATATGCCGCTCTTCTTGGACAAATGAGTTATCTAAAACAATTTCTCCACCAGGAATCGACCCTCCCAAGCATATTGCAAGAGAAGTGGAAGACTTCATCCACCAAAACAACTCGAAGCAGAGCCAATGGGAAGCTGAATTGCAGAGAGGAAAGTAGTCGAAAATCTCCTCCATCATCACCGGGATATCAACTGAGATCAGTTCCTTATTCAAGGGAAGGATTAGGCATTGGAAAGGTTTAGTCATAGGTCTTTCTTTATATTTCAATGAAATGTTTTCCCCAACCAGTTTATGAAAATATGCTGAATTGAAACAGATGACAGCTAAGGTAAAGAATTTATTCTACATGGCTCAGGGAAAACAGCATCTCAACGTCTTACTTAAACATTCTCGACTGCTATTACGGTGA

mRNA sequence

ATGCCAATGGATATGGAGGCTTCAAGTTCATTCAAAGAAGGTGCAGCTGAGATTGTATTTTTCGACTTGGAAACTACCGTACCCAAAAGAGTTGGGCAACGGTTTCGAGTATTGGAATTTGGTGCTATTGTTGTCTGCCCAATGAAACTTGTAGAGCTCGAGAGCTTTACTACTCTCATTAGGCCAACGGATTTATCTGCTGTTGCGTTGAGGTCTAGCCGACCTGACGGAATAACTAGAGCAGCTGTTGCAACTGCACCATTGTTTGAGGAAGTGGCTGACAAGATATTCAGCATTTTGAATGGAAGGATATGGGCAGGTCACAACATTCGAAGATTCGACTGTGTTCGTATTAAGGAGGCATTTGCAGAGATTGGCAGGCCTGCTCCTATCCCAGTTGGGATGGTTGATTCTTTAGGAGTCTTAACGAACAAATTTGGCAAGAGAGCCGGGAACATGAAGATGGCATCATTGGCTTCTTACTTTCAGTTGGGACAGCAAAAGCACAGGAGCCTCGACGATGTTCGTATGAACTTGGAGGTTCTCAAACATTGTGCTACTGTTCTATTTCTGGAATCGACCCTCCCAAGCATATTGCAAGAGAAGTGGAAGACTTCATCCACCAAAACAACTCGAAGCAGAGCCAATGGGAAGCTGAATTGCAGAGAGGAAAGTAGTCGAAAATCTCCTCCATCATCACCGGGATATCAACTGAGATCAGTTCCTTATTCAAGGGAAGGATTAGGCATTGGAAAGATGACAGCTAAGGTAAAGAATTTATTCTACATGGCTCAGGGAAAACAGCATCTCAACGTCTTACTTAAACATTCTCGACTGCTATTACGGTGA

Coding sequence (CDS)

ATGCCAATGGATATGGAGGCTTCAAGTTCATTCAAAGAAGGTGCAGCTGAGATTGTATTTTTCGACTTGGAAACTACCGTACCCAAAAGAGTTGGGCAACGGTTTCGAGTATTGGAATTTGGTGCTATTGTTGTCTGCCCAATGAAACTTGTAGAGCTCGAGAGCTTTACTACTCTCATTAGGCCAACGGATTTATCTGCTGTTGCGTTGAGGTCTAGCCGACCTGACGGAATAACTAGAGCAGCTGTTGCAACTGCACCATTGTTTGAGGAAGTGGCTGACAAGATATTCAGCATTTTGAATGGAAGGATATGGGCAGGTCACAACATTCGAAGATTCGACTGTGTTCGTATTAAGGAGGCATTTGCAGAGATTGGCAGGCCTGCTCCTATCCCAGTTGGGATGGTTGATTCTTTAGGAGTCTTAACGAACAAATTTGGCAAGAGAGCCGGGAACATGAAGATGGCATCATTGGCTTCTTACTTTCAGTTGGGACAGCAAAAGCACAGGAGCCTCGACGATGTTCGTATGAACTTGGAGGTTCTCAAACATTGTGCTACTGTTCTATTTCTGGAATCGACCCTCCCAAGCATATTGCAAGAGAAGTGGAAGACTTCATCCACCAAAACAACTCGAAGCAGAGCCAATGGGAAGCTGAATTGCAGAGAGGAAAGTAGTCGAAAATCTCCTCCATCATCACCGGGATATCAACTGAGATCAGTTCCTTATTCAAGGGAAGGATTAGGCATTGGAAAGATGACAGCTAAGGTAAAGAATTTATTCTACATGGCTCAGGGAAAACAGCATCTCAACGTCTTACTTAAACATTCTCGACTGCTATTACGGTGA

Protein sequence

MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRSVPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR*

Homology

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BLAST of CsaV3_6G045640 vs. NCBI nr
Match: XP_011657983.1 (protein NEN4 isoform X1 [Cucumis sativus] >KAE8647561.1 hypothetical protein Csa_003314 [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI
Sbjct: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR
Sbjct: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 282

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BLAST of CsaV3_6G045640 vs. NCBI nr
Match: XP_008440629.1 (PREDICTED: protein NEN4 isoform X3 [Cucumis melo] >KAA0036283.1 protein NEN4 isoform X3 [Cucumis melo var. makuwa] >TYK12677.1 protein NEN4 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 267/282 (94.68%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 VPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 282

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BLAST of CsaV3_6G045640 vs. NCBI nr
Match: XP_016899301.1 (PREDICTED: protein NEN4 isoform X1 [Cucumis melo])

HSP 1 Score: 517.3 bits (1331), Expect = 8.3e-143
Identity = 267/286 (93.36%), Postives = 273/286 (95.45%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFL----ESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGY 240
           VLKHCATVLFL    ESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGY
Sbjct: 181 VLKHCATVLFLFLHQESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGY 240

Query: 241 QLRSVPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           QLRSVPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 QLRSVPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 286

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BLAST of CsaV3_6G045640 vs. NCBI nr
Match: XP_016899303.1 (PREDICTED: protein NEN4 isoform X4 [Cucumis melo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 266/282 (94.33%), Postives = 272/282 (96.45%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKH SLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKH-SLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 VPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 281

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BLAST of CsaV3_6G045640 vs. NCBI nr
Match: XP_004143479.1 (protein NEN4 isoform X2 [Cucumis sativus])

HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142
Identity = 269/282 (95.39%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI
Sbjct: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSREGLGIGK             GKQHLNVLLKHSRLLLR
Sbjct: 241 VPYSREGLGIGK-------------GKQHLNVLLKHSRLLLR 269

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BLAST of CsaV3_6G045640 vs. ExPASy Swiss-Prot
Match: F4JJ23 (Protein NEN4 OS=Arabidopsis thaliana OX=3702 GN=NEN4 PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.5e-90
Identity = 179/268 (66.79%), Postives = 202/268 (75.37%), Query Frame = 0


Query: 17  EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRSSRPD 76
           EIVFFDLET VP + GQ F +LEFGAI+VCP KL ELESFTTLI+P DLS V++RSSR D
Sbjct: 9   EIVFFDLETNVPNKAGQHFHILEFGAIIVCPKKLEELESFTTLIQPKDLSVVSIRSSRSD 68

Query: 77  GITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIPVGMV 136
           GITRA V  AP FE+VA+KI  +LNGRIWAGHNIRRFDCVRIKEAFAEIG+ AP P G++
Sbjct: 69  GITRAKVTNAPSFEDVAEKIHGLLNGRIWAGHNIRRFDCVRIKEAFAEIGKAAPEPSGII 128

Query: 137 DSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLESTLP 196
           DSLG+L++KFGKRAGNMKMASLA+YF LG QKHRSLDDVRMNLEVLKHCATVLFLESTLP
Sbjct: 129 DSLGLLSDKFGKRAGNMKMASLAAYFGLGVQKHRSLDDVRMNLEVLKHCATVLFLESTLP 188

Query: 197 SILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQL--RSVPYSREGLGIGKMT 256
           + L+ KW TSS   TRSR N                   YQ+  R++PYS+  L   KMT
Sbjct: 189 NHLEGKWHTSSKIMTRSRRN-------------------YQIAQRAMPYSKGSL--EKMT 248

Query: 257 AKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
             VKNL   AQG Q L  L+ HS  LLR
Sbjct: 249 QNVKNLLSKAQGNQTLQSLINHSHSLLR 255

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BLAST of CsaV3_6G045640 vs. ExPASy Swiss-Prot
Match: Q9CA74 (Protein NEN3 OS=Arabidopsis thaliana OX=3702 GN=NEN3 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.4e-68
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 0


Query: 7   ASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLS 66
           ASS   +  +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS
Sbjct: 2   ASSLGGDERSEIAFFDLETAVPTKSGEPFAILEFGAILVCPRRLEELYSYSTLVRPTDLS 61

Query: 67  AVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIG 126
            ++  + R  GITR  V +A  F E+ADK++ IL+GRIWAGHNI RFDCVRI+EAFAEIG
Sbjct: 62  LISTLTKRRSGITRDGVLSAHTFSEIADKVYDILHGRIWAGHNIIRFDCVRIREAFAEIG 121

Query: 127 RPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCA 186
              P P   +DSL +L+ KFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLEV+K+CA
Sbjct: 122 LSPPEPKATIDSLSLLSQKFGKRAGDMKMASLATYFGLGDQAHRSLDDVRMNLEVVKYCA 181

Query: 187 TVLFLESTLPSILQEKWKTSSTKTTRSRANGKL---NCREE--SSRKSPPSSP 235
           TVLFLES++P IL +    S  K+ R+R+NGKL     RE   SS  SP + P
Sbjct: 182 TVLFLESSVPDILTDMSWFSPRKSPRTRSNGKLVANGVRESSTSSSSSPKTDP 234

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BLAST of CsaV3_6G045640 vs. ExPASy Swiss-Prot
Match: Q9FLR0 (Protein NEN1 OS=Arabidopsis thaliana OX=3702 GN=NEN1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-66
Identity = 129/202 (63.86%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 13  EGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRS 72
           E  +EI FFD+ETTVPKR GQRF +LEFG+I+VCP KL EL S+TTL++P DLS ++  S
Sbjct: 4   EDRSEIAFFDVETTVPKR-GQRFAILEFGSILVCPKKLTELRSYTTLVQPADLSLISSLS 63

Query: 73  SRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIP 132
            R +GI R  V  APLF ++AD ++ IL+GRIWAGHNI RFDC RI+EAFAEIGR  P P
Sbjct: 64  VRCNGIKRDDVVLAPLFADIADTVYDILHGRIWAGHNILRFDCARIREAFAEIGRQPPEP 123

Query: 133 VGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLE 192
            G +DSLG+LT KFG+RAG+MKMA+LA YF LG Q HRSLDDVRMNLEVLK+CATVLFLE
Sbjct: 124 KGAIDSLGLLTQKFGRRAGDMKMATLARYFGLGNQTHRSLDDVRMNLEVLKYCATVLFLE 183

Query: 193 STLPSILQEKWKTSSTKTTRSR 215
           S+LP    +   +  T ++R R
Sbjct: 184 SSLPYAHVDNSVSPETISSRRR 204

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy Swiss-Prot
Match: Q0V842 (Protein NEN2 OS=Arabidopsis thaliana OX=3702 GN=NEN2 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-64
Identity = 127/222 (57.21%), Postives = 165/222 (74.32%), Query Frame = 0


Query: 13  EGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRS 72
           E  +EI FFD+ETT+P RVGQ + +LEFG+I+VCP KLVEL++++ L+RP +L+ +  RS
Sbjct: 11  EDRSEIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLVRPANLNLITPRS 70

Query: 73  SRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIP 132
            + +GI R  V +A  F ++AD ++ IL+GRIWAGHNI +FDC RI+EAFAEIGR  P P
Sbjct: 71  VKCNGIKREDVESALTFADIADTVYDILHGRIWAGHNILKFDCPRIREAFAEIGRDPPEP 130

Query: 133 VGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLE 192
            G +DSL +LT +FG+RAG+MKMA+LA+YF LG Q HRSLDDVRMN EVLK+CATVLFLE
Sbjct: 131 KGTIDSLALLTQRFGRRAGDMKMATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLFLE 190

Query: 193 STLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSP 235
           S+LP  L E   T++T  T SR       R  + +KSP  SP
Sbjct: 191 SSLPDELIENSVTTTTPETSSR-------RRRTIKKSPLQSP 225

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL
Match: A0A5D3CL58 (Protein NEN4 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002650 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.3e-145
Identity = 267/282 (94.68%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 VPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 282

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL
Match: A0A1S3B2A8 (protein NEN4 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.3e-145
Identity = 267/282 (94.68%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 VPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 282

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL
Match: A0A1S4DTI3 (protein NEN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.0e-143
Identity = 267/286 (93.36%), Postives = 273/286 (95.45%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFL----ESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGY 240
           VLKHCATVLFL    ESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGY
Sbjct: 181 VLKHCATVLFLFLHQESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGY 240

Query: 241 QLRSVPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           QLRSVPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 QLRSVPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 286

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL
Match: A0A1S4DTM0 (protein NEN4 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.8e-143
Identity = 266/282 (94.33%), Postives = 272/282 (96.45%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEAS SFKEGA EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESF TLI
Sbjct: 1   MPMDMEASCSFKEGATEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFATLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           +PTDLSAVALRSSRPDGITR AVATAPLFE+VADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  KPTDLSAVALRSSRPDGITREAVATAPLFEDVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAP PVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKH SLDDVRMNLE
Sbjct: 121 AFAEIGRPAPTPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKH-SLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQ+KWKTS TKTTR+RANGKL+CREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQDKWKTSPTKTTRNRANGKLHCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSRE LGIGKMTAKVKN+ YMAQGKQHLNVLLKHSR LLR
Sbjct: 241 VPYSRERLGIGKMTAKVKNVLYMAQGKQHLNVLLKHSRSLLR 281

[Close]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL
Match: A0A0A0KIX8 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500610 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.0e-142
Identity = 269/282 (95.39%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
           MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI
Sbjct: 1   MPMDMEASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60

Query: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120
           RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE
Sbjct: 61  RPTDLSAVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKE 120

Query: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180
           AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE
Sbjct: 121 AFAEIGRPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLE 180

Query: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240
           VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS
Sbjct: 181 VLKHCATVLFLESTLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQLRS 240

Query: 241 VPYSREGLGIGKMTAKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
           VPYSREGLGIGK             GKQHLNVLLKHSRLLLR
Sbjct: 241 VPYSREGLGIGK-------------GKQHLNVLLKHSRLLLR 269

[Close]

BLAST of CsaV3_6G045640 vs. TAIR 10
Match: AT4G39810.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 332.0 bits (850), Expect = 4.6e-91
Identity = 179/268 (66.79%), Postives = 202/268 (75.37%), Query Frame = 0


Query: 17  EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRSSRPD 76
           EIVFFDLET VP + GQ F +LEFGAI+VCP KL ELESFTTLI+P DLS V++RSSR D
Sbjct: 9   EIVFFDLETNVPNKAGQHFHILEFGAIIVCPKKLEELESFTTLIQPKDLSVVSIRSSRSD 68

Query: 77  GITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIPVGMV 136
           GITRA V  AP FE+VA+KI  +LNGRIWAGHNIRRFDCVRIKEAFAEIG+ AP P G++
Sbjct: 69  GITRAKVTNAPSFEDVAEKIHGLLNGRIWAGHNIRRFDCVRIKEAFAEIGKAAPEPSGII 128

Query: 137 DSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLESTLP 196
           DSLG+L++KFGKRAGNMKMASLA+YF LG QKHRSLDDVRMNLEVLKHCATVLFLESTLP
Sbjct: 129 DSLGLLSDKFGKRAGNMKMASLAAYFGLGVQKHRSLDDVRMNLEVLKHCATVLFLESTLP 188

Query: 197 SILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSPGYQL--RSVPYSREGLGIGKMT 256
           + L+ KW TSS   TRSR N                   YQ+  R++PYS+  L   KMT
Sbjct: 189 NHLEGKWHTSSKIMTRSRRN-------------------YQIAQRAMPYSKGSL--EKMT 248

Query: 257 AKVKNLFYMAQGKQHLNVLLKHSRLLLR 283
             VKNL   AQG Q L  L+ HS  LLR
Sbjct: 249 QNVKNLLSKAQGNQTLQSLINHSHSLLR 255

[Close]

BLAST of CsaV3_6G045640 vs. TAIR 10
Match: AT1G74390.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-69
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 0


Query: 7   ASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLS 66
           ASS   +  +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS
Sbjct: 2   ASSLGGDERSEIAFFDLETAVPTKSGEPFAILEFGAILVCPRRLEELYSYSTLVRPTDLS 61

Query: 67  AVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIG 126
            ++  + R  GITR  V +A  F E+ADK++ IL+GRIWAGHNI RFDCVRI+EAFAEIG
Sbjct: 62  LISTLTKRRSGITRDGVLSAHTFSEIADKVYDILHGRIWAGHNIIRFDCVRIREAFAEIG 121

Query: 127 RPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCA 186
              P P   +DSL +L+ KFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLEV+K+CA
Sbjct: 122 LSPPEPKATIDSLSLLSQKFGKRAGDMKMASLATYFGLGDQAHRSLDDVRMNLEVVKYCA 181

Query: 187 TVLFLESTLPSILQEKWKTSSTKTTRSRANGKL---NCREE--SSRKSPPSSP 235
           TVLFLES++P IL +    S  K+ R+R+NGKL     RE   SS  SP + P
Sbjct: 182 TVLFLESSVPDILTDMSWFSPRKSPRTRSNGKLVANGVRESSTSSSSSPKTDP 234

[Close]

BLAST of CsaV3_6G045640 vs. TAIR 10
Match: AT5G07710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 9.3e-68
Identity = 129/202 (63.86%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 13  EGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRS 72
           E  +EI FFD+ETTVPKR GQRF +LEFG+I+VCP KL EL S+TTL++P DLS ++  S
Sbjct: 4   EDRSEIAFFDVETTVPKR-GQRFAILEFGSILVCPKKLTELRSYTTLVQPADLSLISSLS 63

Query: 73  SRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIP 132
            R +GI R  V  APLF ++AD ++ IL+GRIWAGHNI RFDC RI+EAFAEIGR  P P
Sbjct: 64  VRCNGIKRDDVVLAPLFADIADTVYDILHGRIWAGHNILRFDCARIREAFAEIGRQPPEP 123

Query: 133 VGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLE 192
            G +DSLG+LT KFG+RAG+MKMA+LA YF LG Q HRSLDDVRMNLEVLK+CATVLFLE
Sbjct: 124 KGAIDSLGLLTQKFGRRAGDMKMATLARYFGLGNQTHRSLDDVRMNLEVLKYCATVLFLE 183

Query: 193 STLPSILQEKWKTSSTKTTRSR 215
           S+LP    +   +  T ++R R
Sbjct: 184 SSLPYAHVDNSVSPETISSRRR 204

[Close]

BLAST of CsaV3_6G045640 vs. TAIR 10
Match: AT5G61390.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 8.7e-66
Identity = 127/222 (57.21%), Postives = 165/222 (74.32%), Query Frame = 0


Query: 13  EGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLSAVALRS 72
           E  +EI FFD+ETT+P RVGQ + +LEFG+I+VCP KLVEL++++ L+RP +L+ +  RS
Sbjct: 11  EDRSEIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLVRPANLNLITPRS 70

Query: 73  SRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIGRPAPIP 132
            + +GI R  V +A  F ++AD ++ IL+GRIWAGHNI +FDC RI+EAFAEIGR  P P
Sbjct: 71  VKCNGIKREDVESALTFADIADTVYDILHGRIWAGHNILKFDCPRIREAFAEIGRDPPEP 130

Query: 133 VGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLE 192
            G +DSL +LT +FG+RAG+MKMA+LA+YF LG Q HRSLDDVRMN EVLK+CATVLFLE
Sbjct: 131 KGTIDSLALLTQRFGRRAGDMKMATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLFLE 190

Query: 193 STLPSILQEKWKTSSTKTTRSRANGKLNCREESSRKSPPSSP 235
           S+LP  L E   T++T  T SR       R  + +KSP  SP
Sbjct: 191 SSLPDELIENSVTTTTPETSSR-------RRRTIKKSPLQSP 225

[Close]

BLAST of CsaV3_6G045640 vs. TAIR 10
Match: AT1G74390.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-61
Identity = 130/233 (55.79%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 7   ASSSFKEGAAEIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLIRPTDLS 66
           ASS   +  +EI FFDLET VP + G+ F +LEFGAI+VCP +L EL S++TL+RPTDLS
Sbjct: 2   ASSLGGDERSEIAFFDLETAVPTKSGEPFAILEFGAILVCPRRLEELYSYSTLVRPTDLS 61

Query: 67  AVALRSSRPDGITRAAVATAPLFEEVADKIFSILNGRIWAGHNIRRFDCVRIKEAFAEIG 126
            ++  + R  GITR  V +A  F E+ADK++ IL+GRIWAGHNI RFDCVRI+EAFAEIG
Sbjct: 62  LISTLTKRRSGITRDGVLSAHTFSEIADKVYDILHGRIWAGHNIIRFDCVRIREAFAEIG 121

Query: 127 RPAPIPVGMVDSLGVLTNKFGKRAGNMKMASLASYFQLGQQKHRSLDDVRMNLEVLKHCA 186
              P P   +DSL +L+ KFGKRAG+MKMASLA+YF LG Q HRSLDDVRMNLE      
Sbjct: 122 LSPPEPKATIDSLSLLSQKFGKRAGDMKMASLATYFGLGDQAHRSLDDVRMNLE------ 181

Query: 187 TVLFLESTLPSILQEKWKTSSTKTTRSRANGKL---NCREE--SSRKSPPSSP 235
                ES++P IL +    S  K+ R+R+NGKL     RE   SS  SP + P
Sbjct: 182 -----ESSVPDILTDMSWFSPRKSPRTRSNGKLVANGVRESSTSSSSSPKTDP 223

The following BLAST results are available for this feature:

BLAST of CsaV3_6G045640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657983.1	1.5e-152	100.00	protein NEN4 isoform X1 [Cucumis sativus] >KAE8647561.1 hypothetical protein Csa...	[more]
XP_008440629.1	1.5e-144	94.68	PREDICTED: protein NEN4 isoform X3 [Cucumis melo] >KAA0036283.1 protein NEN4 iso...	[more]
XP_016899301.1	8.3e-143	93.36	PREDICTED: protein NEN4 isoform X1 [Cucumis melo]	[more]
XP_016899303.1	1.4e-142	94.33	PREDICTED: protein NEN4 isoform X4 [Cucumis melo]	[more]
XP_004143479.1	4.1e-142	95.39	protein NEN4 isoform X2 [Cucumis sativus]	[more]

BLAST of CsaV3_6G045640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JJ23	6.5e-90	66.79	Protein NEN4 OS=Arabidopsis thaliana OX=3702 GN=NEN4 PE=2 SV=1	[more]
Q9CA74	2.4e-68	59.66	Protein NEN3 OS=Arabidopsis thaliana OX=3702 GN=NEN3 PE=2 SV=1	[more]
Q9FLR0	1.3e-66	63.86	Protein NEN1 OS=Arabidopsis thaliana OX=3702 GN=NEN1 PE=2 SV=1	[more]
Q0V842	1.2e-64	57.21	Protein NEN2 OS=Arabidopsis thaliana OX=3702 GN=NEN2 PE=2 SV=1	[more]

BLAST of CsaV3_6G045640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CL58	7.3e-145	94.68	Protein NEN4 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B2A8	7.3e-145	94.68	protein NEN4 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1	[more]
A0A1S4DTI3	4.0e-143	93.36	protein NEN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1	[more]
A0A1S4DTM0	6.8e-143	94.33	protein NEN4 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484991 PE=4 SV=1	[more]
A0A0A0KIX8	2.0e-142	95.39	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500610...	[more]

BLAST of CsaV3_6G045640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39810.1	4.6e-91	66.79	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G74390.1	1.7e-69	59.66	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G07710.1	9.3e-68	63.86	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G61390.1	8.7e-66	57.21	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G74390.2	1.7e-61	55.79	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 17..191 e-value: 1.3E-28 score: 111.1
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 19..182 e-value: 5.4E-26 score: 92.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 10..189 e-value: 8.8E-29 score: 102.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..240
None	No IPR available	PANTHER	PTHR30231:SF26	PROTEIN NEN4	coord: 9..282
None	No IPR available	PANTHER	PTHR30231	DNA POLYMERASE III SUBUNIT EPSILON	coord: 9..282
None	No IPR available	CDD	cd06127	DEDDh	coord: 19..183 e-value: 2.48775E-25 score: 96.6008
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 18..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G045640.1	CsaV3_6G045640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding