Bhi12G000908 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000908
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ribonuclease P protein subunit p38
Location	chr12: 31486392 .. 31489385 (-)
RNA-Seq Expression	Bhi12G000908
Synteny	Bhi12G000908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCATTATTTGAACTCCACAACTGCATTACTTCACCCAAATTTCAAATAAAGCCGCGAGTGGGCCGTGGAGAAGGCAGCGCTAGTTCGTCTTCATCCTGTTCCACAACGTTGTCTTCCAATCGGAGAACGCCGCCGTTATTTCTCTCCAGACTTTGAAGCTTCTACTCTTTCCAGCAAGTTTTCAGTCATGGGAAAGAAGGCTAAATCTTCTGCTCCTGATGCAGTCCTTCAATCCAAACCTAACGAAGAGTATGCCTGCTTTCTTTCTAACTTTCATGCTTTTCGGACCTTTTTCCCCCCTCTTCTCCATTCGATTTCTTACCTTGCTGTTTTTGCCCTAATTTGTAATGGAATACGTTTTCCGGAATTTGATTAACGCAGTTCCTACGAAGGAGAACGTCTCGATGAGTTTCTACAATCGATTCAGAGGTAAACTGTAGTTAAACTATCTAATAATGCACTTCAACCCACCAGTAACCGATCCTTCTTTTTAACAGAGAGATAAAGACAGCAAGATTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGGTTTCCTCTAATCCTTATGTTTCAATGACGTCTCTTCGTATTCTCGCCTTTTTTAGTTTCTCCTTTCCATGTCATGTCAATAATGTTTTTTTTTTTTTGCTATTAGTTATAAGCCACTTATGTTGAGTGATGGCATTCTTTTTAGAAACAATTCGCAATTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGACACCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGTAGTTTACTCTTATATTTATGTTGGGAAATGCTATAGTGGGTTTAGGAATTTGCTGAATGTGTAATTAATAGAATCCCAGCTTTACCCTCCTACTGCAGTGTTTTTTATCTTCACCTTATTATTTCTGGTGGATTGATGGAGCCTTTCATTAGCTTGAAGTCATAAGCGTTACTTTCTTTGTTTTGTTTCAGTTCTGTGTCAATCTCGTGCGTGCAAAATGGATGTGTTTATAATGTGTGGGTGTGTGTGTTTTTCATGGGAAGAGGCAACCAATATAAAATGTGAGCTCCATTTGGTGCTTCCATGAGCAAGGTTATGATAAGATGATTTCCTAAAACTTCCTAAACCCTCACTATTTTCATCTAATTTTTCTCAACAAAATGCTTAGTGTCGTTAGCATGGTGACATACCTTCTTGGAGAGTATGCTACTTGATTGGTATAGCCCATGAGCTATACTTGACCACAGTAGAAAACTTCTCAAGAATGACCCATTGTTTATGTATCCTACAGAATGTTGTTTGCTTGTGAAGTATCCCTTCTCAATGCTTGGTACTAGTATAAAGCAAATTTAGTGGCCATTATATAGTGTTTCTTATGTAGCAAGAACTGGTATGAGGCTTTGAGCGCCTATTGGTAAGTTCTATTTCCTCCCTGGTAAGCTTAGTTTCTCATTAAACCATTCCATATGTTTTCTATTCTTAGATAGAACTGCTCCTATCCCTTTAGCAGAAACTTCCATCTGGACTTCATTGATTCTCGTCATGGATCCTAAGAATAACTGTTTTGTAAGAAGCGTGCACTTAGAGATATTAAAGTAAAGCTTGGTGGAATTTGGAGCAGTTTGTCGTCTAAGTAGACAATTAGGAAATTACCAACGTATGGTCATAATACATGTCTCGTGAGACACATAAAGGTACTTGGAGCATTGATGCAGAACACAACTTGCCTTATTTGTAAAGATTCATCTGAGTCTTAAAGGCTATTTTTCATTCTCGTGGTTTGATTGCAGTGACTGCTTTATTGGTCCACAAGTTTTGAAAGTGGTTTCGTTGTGTATAGGGAGTTGATATTTTATGTGCAAACTTTTAACTCTATTTTTGATATGTATTCTTTGCACCATTTTAGTTCTTATCGGTGAGTGTCATTGTGAATTCCCTAGGACAGGCATCCTTTTTATGCTTTATATTTAACTCTCGTGGTTAACTTAAACCCAACTTATCATCCTTTGCCCACTGTCTTTTCTGTATATGGTGTCTAATTAATTCGACATTTCACCTTTTATTATGTAGGCTGTACTGTTAACAGCCAATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTAAAAGATAAAGAAGGGTCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGTGAGAAGGAAATATTAGATCTACGTTTCTTTCATGTGTTGTGTTCTGTTCAACTTTTTTTCTTTTTCTTTTTCTTTTCTTTTCTTTTTTTTTAACTCAGCTGCATGTTTCAAAACGAATTGCAGGCGAATGGAAGCCCTGTCAATCAACTTATTGATGAAATTCTTCAAAGAAAAACATAAAAACACGTTTCATGAGTACAAAGTTATTGGGTGTACAGTAGTGATATGAAATTGAAGCAAATTATTGTCTTCTTTCTTCTAGCAGCCTGAAATTTCTTGCTTGCTAATCACATGAAATGGATTTGAGTTGATTCATTCTAGATAATGACCACCACTATGGTTGGAAAGATAGTTCATTAGACTTTTAGTTGAAATAATATAGTAAAGTATGGTGTATTATTATAAGGAAAGTTTGCAGAAGTCTGAGATTGTAGGATAGTAATTGATATGTAATTCTTTGTTTTTTGGAGTAGAATTGGAGTAGGGGATTCAAACCATAGGTCTTGTGATCACTAACATGCTCGTATGTTAGTTGAGGTACAATCACTTGGACAATTCGTTTGTAATTCATTGATTATTTGAATTGGGGATTATTTATTTTTTGAAAAGGGTTATTGTTTGTCTGACGGAGTTCCAAAAACTCATAATAACATGTGTCATGTACATTCGATTGGAAGTAATAGAGTGATAAGAAATTACTTGTTTGTTTGGTA

mRNA sequence

CCCCATTATTTGAACTCCACAACTGCATTACTTCACCCAAATTTCAAATAAAGCCGCGAGTGGGCCGTGGAGAAGGCAGCGCTAGTTCGTCTTCATCCTGTTCCACAACGTTGTCTTCCAATCGGAGAACGCCGCCGTTATTTCTCTCCAGACTTTGAAGCTTCTACTCTTTCCAGCAAGTTTTCAGTCATGGGAAAGAAGGCTAAATCTTCTGCTCCTGATGCAGTCCTTCAATCCAAACCTAACGAAGATTCCTACGAAGGAGAACGTCTCGATGAGTTTCTACAATCGATTCAGAGAGAGATAAAGACAGCAAGATTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTCGCAATTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGACACCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTGTACTGTTAACAGCCAATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTAAAAGATAAAGAAGGGTCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGAAGCCCTGTCAATCAACTTATTGATGAAATTCTTCAAAGAAAAACATAAAAACACGTTTCATGAGTACAAAGTTATTGGGTGTACAGTAGTGATATGAAATTGAAGCAAATTATTGTCTTCTTTCTTCTAGCAGCCTGAAATTTCTTGCTTGCTAATCACATGAAATGGATTTGAGTTGATTCATTCTAGATAATGACCACCACTATGGTTGGAAAGATAGTTCATTAGACTTTTAGTTGAAATAATATAGTAAAGTATGGTGTATTATTATAAGGAAAGTTTGCAGAAGTCTGAGATTGTAGGATAGTAATTGATATGTAATTCTTTGTTTTTTGGAGTAGAATTGGAGTAGGGGATTCAAACCATAGGTCTTGTGATCACTAACATGCTCGTATGTTAGTTGAGGTACAATCACTTGGACAATTCGTTTGTAATTCATTGATTATTTGAATTGGGGATTATTTATTTTTTGAAAAGGGTTATTGTTTGTCTGACGGAGTTCCAAAAACTCATAATAACATGTGTCATGTACATTCGATTGGAAGTAATAGAGTGATAAGAAATTACTTGTTTGTTTGGTA

Coding sequence (CDS)

ATGGGAAAGAAGGCTAAATCTTCTGCTCCTGATGCAGTCCTTCAATCCAAACCTAACGAAGATTCCTACGAAGGAGAACGTCTCGATGAGTTTCTACAATCGATTCAGAGAGAGATAAAGACAGCAAGATTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTCGCAATTGGAGTTAATGAGGTTACTAGAGTCCTTGAACGGATGACACCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTGTACTGTTAACAGCCAATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTAAAAGATAAAGAAGGGTCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGAAGCCCTGTCAATCAACTTATTGATGAAATTCTTCAAAGAAAAACATAA

Protein sequence

MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT

Homology

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BLAST of Bhi12G000908 vs. TAIR 10
Match: AT4G01790.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40
Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 21  DSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQFAIGVNEVTRVLERMTPSGDS 80
           D YEGERL   L  IQR I+T++  N  SLPEKIWLKKQ AIG+NEVTRVLERM P+  S
Sbjct: 24  DYYEGERLTHLLDLIQRGIETSKLSNVNSLPEKIWLKKQIAIGINEVTRVLERMNPNNTS 83

Query: 81  ARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSRKVPLILVKD-KEGSLRLGEL 140
            +  NP       +LQ V+L A+C PR LT H+P+LA SR VP++ V+D K  SLRLGEL
Sbjct: 84  DQQQNPK------QLQVVILVADCKPRMLTKHIPNLAASRNVPVLYVRDNKRASLRLGEL 143

Query: 141 VNLKTAIAIGIKANGSPVNQLIDEILQR 168
           V LKTA+AIGIKA G+ +N L+ +IL R
Sbjct: 144 VKLKTALAIGIKARGNDLNLLLKQILPR 165

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BLAST of Bhi12G000908 vs. ExPASy Swiss-Prot
Match: P78345 (Ribonuclease P protein subunit p38 OS=Homo sapiens OX=9606 GN=RPP38 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 5.0e-05
Identity = 35/109 (32.11%), Postives = 52/109 (47.71%), Query Frame = 0


Query: 56  LKKQFAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPS 115
           ++KQ AIGVNEVTR LER                    +L  VL+  +  P  +T+H+  
Sbjct: 109 VRKQLAIGVNEVTRALERR-------------------ELLLVLVCKSVKPAMITSHLIQ 168

Query: 116 LAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEI 165
           L++SR VP   V     S R+  ++ LK  +A+  K N       +DE+
Sbjct: 169 LSLSRSVPACQV--PRLSERIAPVIGLKCVLALAFKKN---TTDFVDEV 193

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BLAST of Bhi12G000908 vs. ExPASy Swiss-Prot
Match: Q32LC1 (Ribonuclease P protein subunit p38 OS=Bos taurus OX=9913 GN=RPP38 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = 0


Query: 56  LKKQFAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPS 115
           ++KQ AIG+NEVTR LER                    +L   L   +  P  +T+H+  
Sbjct: 109 VRKQLAIGINEVTRALERN-------------------ELLLALACKSAKPAIVTSHLVQ 168

Query: 116 LAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQR 168
           L++SR VP   V     S RL  ++ LK  +A+G K N +   + +  IL R
Sbjct: 169 LSVSRGVPACQV--PRLSERLAPVLGLKCVLALGFKRNTTAFGEELRAILPR 199

[Close]

BLAST of Bhi12G000908 vs. ExPASy Swiss-Prot
Match: Q80UU2 (Ribonuclease P protein subunit p38 OS=Mus musculus OX=10090 GN=Rpp38 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.5e-05
Identity = 34/114 (29.82%), Postives = 55/114 (48.25%), Query Frame = 0


Query: 54  IWLKKQFAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHV 113
           + ++KQ  IGVNEVTR LER                    +L  VL+  +  P  +T+H+
Sbjct: 102 VHVRKQLVIGVNEVTRALERN-------------------ELLLVLVCKSVKPAIITSHL 161

Query: 114 PSLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQR 168
             L++SR VP   V   + S R+  ++ LK  +A+G + N       ++ I+ R
Sbjct: 162 IQLSLSRTVPACQV--PQLSERIAPVIGLKCVLALGSRKNTRDFADEVEAIIPR 194

[Close]

BLAST of Bhi12G000908 vs. NCBI nr
Match: XP_038875290.1 (ribonuclease P protein subunit p38 [Benincasa hispida])

HSP 1 Score: 330.9 bits (847), Expect = 6.6e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 169

[Close]

BLAST of Bhi12G000908 vs. NCBI nr
Match: XP_022938626.1 (ribonuclease P protein subunit p38 [Cucurbita moschata])

HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK AR LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPSGDSARI+NPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLI EILQR T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTT 169

[Close]

BLAST of Bhi12G000908 vs. NCBI nr
Match: KAG6579150.1 (hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016668.1 hypothetical protein SDJN02_21778 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.9 bits (764), Expect = 2.8e-77
Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK AR LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPS DSARI+NPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLI EILQR T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTT 169

[Close]

BLAST of Bhi12G000908 vs. NCBI nr
Match: XP_023549838.1 (ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 8.0e-77
Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK AR LNAE+LPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAETLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPS DSARI+NPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSP+NQLI EILQR T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPINQLIGEILQRTT 169

[Close]

BLAST of Bhi12G000908 vs. NCBI nr
Match: XP_022993803.1 (ribonuclease P protein subunit p38 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-75
Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK ARFLNA+SLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARFLNADSLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPS DSAR MNPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSAR-MNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLI EIL R T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKDNGSPVNQLIGEILSRTT 168

[Close]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL
Match: A0A6J1FDN9 (ribonuclease P protein subunit p38 OS=Cucurbita moschata OX=3662 GN=LOC111444805 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK AR LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPSGDSARI+NPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLI EILQR T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTT 169

[Close]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL
Match: A0A6J1K3C5 (ribonuclease P protein subunit p38 OS=Cucurbita maxima OX=3661 GN=LOC111489702 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60
           MGKKAKSS P AV+QSK NEDSYEGERLDE LQSIQREIK ARFLNA+SLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARFLNADSLPEKIWLKKQF 60

Query: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120
           AIGVNEVTRVLERMTPS DSAR MNPNYKACTV+LQA+LLTA+CNPRWLTNHVPSLA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSAR-MNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQRKT 170
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLI EIL R T
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKDNGSPVNQLIGEILSRTT 168

[Close]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL
Match: A0A1S3CR39 (ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75
Identity = 151/168 (89.88%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MGKKAKSSA-PDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQ 60
           MGK  KSSA P A LQSKP EDSYEGERLDE L SIQREIKTAR LNAESLPEK WLKKQ
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  FAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMS 120
           FAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQA+LLTANCNPRWLTNHVP LAMS
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMS 120

Query: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQR 168
           RKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLIDEILQR
Sbjct: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR 168

[Close]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL
Match: A0A1S3CQV2 (ribonuclease P protein subunit p38 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.2e-73
Identity = 151/169 (89.35%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MGKKAKSSA-PDAVLQSKPNED-SYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKK 60
           MGK  KSSA P A LQSKP ED SYEGERLDE L SIQREIKTAR LNAESLPEK WLKK
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  QFAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAM 120
           QFAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQA+LLTANCNPRWLTNHVP LAM
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAM 120

Query: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQR 168
           SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLIDEILQR
Sbjct: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR 169

[Close]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL
Match: A0A1S3CQU5 (uncharacterized protein LOC103503720 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 151/185 (81.62%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MGKKAKSSA-PDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQ 60
           MGK  KSSA P A LQSKP EDSYEGERLDE L SIQREIKTAR LNAESLPEK WLKKQ
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  FAIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQ-----------------AVLLTA 120
           FAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQ                 A+LLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120

Query: 121 NCNPRWLTNHVPSLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLID 168
           NCNPRWLTNHVP LAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180

The following BLAST results are available for this feature:

BLAST of Bhi12G000908 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01790.1	1.3e-40	58.78	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

BLAST of Bhi12G000908 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P78345	5.0e-05	32.11	Ribonuclease P protein subunit p38 OS=Homo sapiens OX=9606 GN=RPP38 PE=1 SV=2	[more]
Q32LC1	6.5e-05	32.14	Ribonuclease P protein subunit p38 OS=Bos taurus OX=9913 GN=RPP38 PE=2 SV=2	[more]
Q80UU2	8.5e-05	29.82	Ribonuclease P protein subunit p38 OS=Mus musculus OX=10090 GN=Rpp38 PE=1 SV=1	[more]

BLAST of Bhi12G000908 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875290.1	6.6e-87	100.00	ribonuclease P protein subunit p38 [Benincasa hispida]	[more]
XP_022938626.1	3.3e-78	91.72	ribonuclease P protein subunit p38 [Cucurbita moschata]	[more]
KAG6579150.1	2.8e-77	91.12	hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023549838.1	8.0e-77	89.94	ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]	[more]
XP_022993803.1	3.4e-75	89.94	ribonuclease P protein subunit p38 [Cucurbita maxima]	[more]

BLAST of Bhi12G000908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDN9	1.6e-78	91.72	ribonuclease P protein subunit p38 OS=Cucurbita moschata OX=3662 GN=LOC111444805...	[more]
A0A6J1K3C5	1.6e-75	89.94	ribonuclease P protein subunit p38 OS=Cucurbita maxima OX=3661 GN=LOC111489702 P...	[more]
A0A1S3CR39	4.8e-75	89.88	ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S3CQV2	1.2e-73	89.35	ribonuclease P protein subunit p38 isoform X5 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S3CQU5	8.4e-72	81.62	uncharacterized protein LOC103503720 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 94..155 e-value: 4.9E-7 score: 29.4
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 35..168 e-value: 6.5E-22 score: 79.3
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 31..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR47903	OS07G0636400 PROTEIN	coord: 14..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000908	Bhi12M000908	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle