Bhi12G000497 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000497
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	DNA polymerase delta subunit 4
Location	chr12: 17761703 .. 17763624 (+)
RNA-Seq Expression	Bhi12G000497
Synteny	Bhi12G000497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAGGGTCCATATAGCGAGAGAGGCAAATATCAAATTAGACCTCCAAGAAGAACAACGAGAACAAATTCAAAATTTGAAATTCCGAAGTCGATCGCAGAGAAGGAGCAAAATCAAGAATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAATCTCCAAGGCTAACAGCAAGGCTTCAAAGCCCTCTTCTCGGAAAATCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCATTTCTCATGGATCCCTCGACCTTCAAGGTTCATATATCTTCTTTTCCAGTCTTCTTCGTTTCTTTACATTCCTGGATATTTGCTTTCTTCGTTAGGTCTCGTTGCTTTTGGTTCGTTCATTAACGTGGTATGAATGACCTGTGGACTTATGCCTCGTCATTCTGAATGATTAAGCACGTTTCAGTTGAGATAAAGTTCTATAATAGTTATGCCTCGTGATTCTAAAGGATTAAGCACGTTGCCAAGAAGTTGTTGAGTATCAGTCACAATCAAGCTGTTCAATAGTTGAATTAAGGATATCTATAGTTTGGATTTCTCTCTTTTTTACTGTTGAAGGATATTAAATTAATAGGTTTAGACTTATCCCTCATAGTTATGCACAAAGAAGGATGAACAATTTAGTCTTGCCGTCTCTGTGTCTCACACGTATTGGACACTTGAACGCTTTGATACTTATTGAACAACATTTCGATTCTTGTTGGACACATAGAGGATACTTGTTAACACAATAAGTATGCATTAGACACTACTTGTACGAAATCAATATAGGTCTAAAATATCAACATTTGTTAGGTATTTATTGAACACTGAATAGATGCATAATAATCTTGGACAAATATAAGAAATTTCAGGAGTGAAATACATCAAATTCATTTTTTAGCATATAGATGCATAAACTTATTGACTTTTCTTTTTCAAGGGAAAAAAAAAAACTTATTGACTTTTCTAGTAGTAAGTTATATATATGTTTAAAAATGTATCTTTGCCGCATTTGTCTTAGATCTTTAGAACATGATGTGTCACTGTTATTGTGTTGTATCTATGTTTCATATTCGTATCCCTACTTCTTAGCTTAGGAAGGATTATGCATGTTCGAGTGAAAATGTTGTGGGATACCGGTTAAGTTCTATAGTAGTGGAATTATGGACGCCCAATGTTAGCTTTCTTTTAGTTTTCCAAAAAAAAAAAAAAAGGAATCTACGTTTTACTATATATCTATTTTAATAATCTGCATTTTGTTTCATTTTGAACGTTGAATTTTGTTTTAGATGATTATGGTGCATTGGAGAATATGTTGAGGCAATTCGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTAGAAAAGTGCAATTGGAGTGCTTGTGGGATTCTCGAGTTTAAACTACAATGCTTGCTGTGTTATTTTTGTTTAATGTATGAAGTGTATGCTGTACTTTTGGACAAAATGTTCAGCCCCTGGCTGAAACGGTGCACTTTCCCTGTGATGTGAATGGGTTAGAAATAGAATGTTTGCTGATGACAGCTTCCTTATTTACTTCTCAGTTATGTTTAAAACCTCTTATGAGTAGTTGTATAGTTAAATTTGGGTGATATTTTCCTTTCCTAGTGTTGTTATACTTGAACTTGACATGATGTGTGCATCCGTGATTAAGACGTCTTTCGATTCCTAAAAGTTTGAAGAATATTTGTATAAGTAGTAGCATTTCAAAATTTTGCCAATGTGATATTGGTGGGTTCCTTAATCTTGGCTGTCTAAGATTTAGAATAGAATAGTCAA

mRNA sequence

TATTAGGGTCCATATAGCGAGAGAGGCAAATATCAAATTAGACCTCCAAGAAGAACAACGAGAACAAATTCAAAATTTGAAATTCCGAAGTCGATCGCAGAGAAGGAGCAAAATCAAGAATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAATCTCCAAGGCTAACAGCAAGGCTTCAAAGCCCTCTTCTCGGAAAATCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCATTTCTCATGGATCCCTCGACCTTCAAGATGATTATGGTGCATTGGAGAATATGTTGAGGCAATTCGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTAGAAAAGTGCAATTGGAGTGCTTGTGGGATTCTCGAGTTTAAACTACAATGCTTGCTGTGTTATTTTTGTTTAATGTATGAAGTGTATGCTGTACTTTTGGACAAAATGTTCAGCCCCTGGCTGAAACGGTGCACTTTCCCTGTGATGTGAATGGGTTAGAAATAGAATGTTTGCTGATGACAGCTTCCTTATTTACTTCTCAGTTATGTTTAAAACCTCTTATGAGTAGTTGTATAGTTAAATTTGGGTGATATTTTCCTTTCCTAGTGTTGTTATACTTGAACTTGACATGATGTGTGCATCCGTGATTAAGACGTCTTTCGATTCCTAAAAGTTTGAAGAATATTTGTATAAGTAGTAGCATTTCAAAATTTTGCCAATGTGATATTGGTGGGTTCCTTAATCTTGGCTGTCTAAGATTTAGAATAGAATAGTCAA

Coding sequence (CDS)

ATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAATCTCCAAGGCTAACAGCAAGGCTTCAAAGCCCTCTTCTCGGAAAATCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCATTTCTCATGGATCCCTCGACCTTCAAGATGATTATGGTGCATTGGAGAATATGTTGAGGCAATTCGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTAGAAAAGTGCAATTGGAGTGCTTGTGGGATTCTCGAGTTTAA

Protein sequence

MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSLDLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLECLWDSRV

Homology

[Close]

BLAST of Bhi12G000497 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 )

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-36
Identity = 80/130 (61.54%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNS---GISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISH 60
           MA+    LK FYKQ K++   GISK     SKPSSRK+ +P ++A+ GSD  QPAALISH
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISK-----SKPSSRKV-APKHAAAQGSDVTQPAALISH 60

Query: 61  GSLDLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKV 120
           GS+DL +DY   E MLRQFDMN+ YGPCLGMTR+ RWERA  LG+NPP +IE LLK  KV
Sbjct: 61  GSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKV 120

Query: 121 QLECLWDSRV 128
           Q +CLW  RV
Sbjct: 121 QQDCLWQGRV 124

[Close]

BLAST of Bhi12G000497 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 72  MLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKA 115
           +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LKA
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]

BLAST of Bhi12G000497 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-07
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 43  SLGSDAVQPAALISHGSLDLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGL 102
           S G    + A  +    L L  D   LE +LRQFD+   YGPC G+TR+ RW RA  +GL
Sbjct: 20  SAGHSKGELAPDLGEEPLPLSVDEEELE-LLRQFDLAWQYGPCTGITRLQRWHRAEQMGL 79

Query: 103 NPPKDIETLLKA 115
            PP ++  +L++
Sbjct: 80  KPPPEVHQVLQS 90

[Close]

BLAST of Bhi12G000497 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-07
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 63  QDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLK 114
           +D+  A   +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LK
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLK 89

[Close]

BLAST of Bhi12G000497 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-06
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 69  LENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 121
           +E +L  FD    YGP LGMTRM RW+RA N  LNPP+ +  +L   +   E
Sbjct: 93  VEFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKILMLEEADEE 144

[Close]

BLAST of Bhi12G000497 vs. NCBI nr
Match: XP_038875328.1 (DNA polymerase delta subunit 4 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 3.8e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL
Sbjct: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE
Sbjct: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 127

[Close]

BLAST of Bhi12G000497 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55
Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRK KSPANSASLGS+AVQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYG  ENMLRQFDMNMAYGPCLGMTRMARWERAC+LGLNPPKDI TLLKA KVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Bhi12G000497 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRK KSPANSASLGSDAVQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYG  EN LRQFDMN AYGPCLGMTRMARWERAC+LGLNPPKDI TLLKA KVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Bhi12G000497 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 198.0 bits (502), Expect = 5.0e-47
Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MASARGG+KDFYKQRKNSG+    SK SKPSSRK KS ANSA+L SD VQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DL+DDYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IETLLK  KVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Bhi12G000497 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 5.0e-47
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MASARGG+KDFYKQRKNSG+    SK SKPSSRK KS ANSA+L SDAVQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSRKTKSRANSATLDSDAVQPAALISHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DL+DDYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IE+LLK  KVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIESLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRK KSPANSASLGS+AVQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYG  ENMLRQFDMNMAYGPCLGMTRMARWERAC+LGLNPPKDI TLLKA KVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRK KSPANSASLGS+AVQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYG  ENMLRQFDMNMAYGPCLGMTRMARWERAC+LGLNPPKDI TLLKA KVQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRK KSPANSASLGSDAVQPAAL+SHGSL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DLQDDYG  EN LRQFDMN AYGPCLGMTRMARWERAC+LGLNPPKDI TLLKA KVQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MASARGG+KDFYKQRKNSG+    SK SKPSSRK KS ANSA+L SD VQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DL+DDYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IETLLK  KVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL
Match: A0A6J1K4T3 (uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46
Identity = 100/127 (78.74%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKIKSPANSASLGSDAVQPAALISHGSL 60
           MASARGG+KDFYKQRKNSG+    SK SKPSS K KS A+SA+L SD VQPAALISHGSL
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDDYGALENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKARKVQLE 120
           DL+DDYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IETLLK  KVQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

The following BLAST results are available for this feature:

BLAST of Bhi12G000497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09815.1	2.5e-36	61.54	polymerase delta 4	[more]

BLAST of Bhi12G000497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CWP8	1.8e-07	53.49	DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1	[more]
Q3T0X9	5.2e-07	40.28	DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1	[more]
Q9HCU8	6.8e-07	47.06	DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1	[more]
O59835	2.0e-06	46.15	DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Bhi12G000497 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875328.1	3.8e-63	100.00	DNA polymerase delta subunit 4 [Benincasa hispida]	[more]
XP_008467236.1	8.5e-55	90.55	PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polym...	[more]
XP_004143634.1	4.2e-54	89.76	uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical ...	[more]
XP_022957680.1	5.0e-47	80.31	uncharacterized protein LOC111459143 [Cucurbita moschata]	[more]
KAG6605696.1	5.0e-47	80.31	DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]

BLAST of Bhi12G000497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNL0	4.1e-55	90.55	DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT23	4.1e-55	90.55	DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1	[more]
A0A0A0KND6	2.0e-54	89.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1	[more]
A0A6J1H180	2.4e-47	80.31	uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A6J1K4T3	5.9e-46	78.74	uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007218	DNA polymerase delta, subunit 4	PFAM	PF04081	DNA_pol_delta_4	coord: 63..116 e-value: 2.4E-20 score: 73.2
IPR007218	DNA polymerase delta, subunit 4	PANTHER	PTHR14303	DNA POLYMERASE DELTA SUBUNIT 4	coord: 5..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR14303:SF12	DNA POLYMERASE DELTA SUBUNIT 4	coord: 5..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000497	Bhi12M000497	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000731	DNA synthesis involved in DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
molecular_function	GO:0003887	DNA-directed DNA polymerase activity