Bhi11G000102 (gene) Wax gourd (B227) v1

Overview
NameBhi11G000102
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionVAN3-binding protein-like isoform X2
Locationchr11: 2621743 .. 2622175 (+)
RNA-Seq ExpressionBhi11G000102
SyntenyBhi11G000102
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCAACAACAAAAGCATTTCTTCATAAATTTCCTCCAAAGCCTTAACCAACATTCAATCCATTCATTAATTTTTTTCCTGTCCTTTTCTTTTTCTTTATTCTCTTACCTTTTTTTGCCTTTCTTCTCAAATCTCCGCCATTGCTGCCGCCATGTCCCGGCCATCCTCCCACACCCCTCTGGATTCCTTCTTGGAGTTCCTATCCAGATCTTGGAGAGTTTCCCCGTCGACCCACTTCGTCAATTCCAAGATTCCGACAGCCACTCACGGCGGCAGGAATTGGGGTGATATTGTTTTAGAAGATCTGGCGGCGACGCCGAGCGGTTTTTGGTGTTTATGAACCCATTTTCGTTTATGTTTTCTGAAATTTCCCAAATGGTGATGGATCGTATTTTCCCATAAAGAAGGAAATTATGAAGGGAGATAAGGCAAT

mRNA sequence

TAGCAACAACAAAAGCATTTCTTCATAAATTTCCTCCAAAGCCTTAACCAACATTCAATCCATTCATTAATTTTTTTCCTGTCCTTTTCTTTTTCTTTATTCTCTTACCTTTTTTTGCCTTTCTTCTCAAATCTCCGCCATTGCTGCCGCCATGTCCCGGCCATCCTCCCACACCCCTCTGGATTCCTTCTTGGAGTTCCTATCCAGATCTTGGAGAGTTTCCCCGTCGACCCACTTCGTCAATTCCAAGATTCCGACAGCCACTCACGGCGGCAGGAATTGGGGTGATATTGTTTTAGAAGATCTGGCGGCGACGCCGAGCGGTTTTTGGTGTTTATGAACCCATTTTCGTTTATGTTTTCTGAAATTTCCCAAATGGTGATGGATCGTATTTTCCCATAAAGAAGGAAATTATGAAGGGAGATAAGGCAAT

Coding sequence (CDS)

ATGTCCCGGCCATCCTCCCACACCCCTCTGGATTCCTTCTTGGAGTTCCTATCCAGATCTTGGAGAGTTTCCCCGTCGACCCACTTCGTCAATTCCAAGATTCCGACAGCCACTCACGGCGGCAGGAATTGGGGTGATATTGTTTTAGAAGATCTGGCGGCGACGCCGAGCGGTTTTTGGTGTTTATGA

Protein sequence

MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGFWCL
Homology
[Close]
BLAST of Bhi11G000102 vs. NCBI nr
Match: XP_038881991.1 (VAN3-binding protein isoform X1 [Benincasa hispida])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSSHTPLDS LEFLSRSWRVSPSTHFVNSK P A+HGG NWGDIVLED +    GF
Sbjct: 1  MSRPSSHTPLDSSLEFLSRSWRVSPSTHFVNSKTPAASHGGGNWGDIVLEDSSGDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. NCBI nr
Match: XP_038882009.1 (VAN3-binding protein isoform X3 [Benincasa hispida])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSSHTPLDS LEFLSRSWRVSPSTHFVNSK P A+HGG NWGDIVLED +    GF
Sbjct: 1  MSRPSSHTPLDSSLEFLSRSWRVSPSTHFVNSKTPAASHGGGNWGDIVLEDSSGDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. NCBI nr
Match: XP_038882000.1 (VAN3-binding protein isoform X2 [Benincasa hispida])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSSHTPLDS LEFLSRSWRVSPSTHFVNSK P A+HGG NWGDIVLED +    GF
Sbjct: 1  MSRPSSHTPLDSSLEFLSRSWRVSPSTHFVNSKTPAASHGGGNWGDIVLEDSSGDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. NCBI nr
Match: XP_022979231.1 (VAN3-binding protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 97.1 bits (240), Expect = 5.9e-17
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  THGG NWGDIVLED ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGTHGGGNWGDIVLEDSSSDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. NCBI nr
Match: XP_022979230.1 (VAN3-binding protein-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 97.1 bits (240), Expect = 5.9e-17
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  THGG NWGDIVLED ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGTHGGGNWGDIVLEDSSSDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match: A0A6J1ISN5 (VAN3-binding protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479021 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-17
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  THGG NWGDIVLED ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGTHGGGNWGDIVLEDSSSDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match: A0A6J1IQ72 (VAN3-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479021 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-17
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  THGG NWGDIVLED ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGTHGGGNWGDIVLEDSSSDAEGF 59

[Close]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match: A0A6J1GX28 (VAN3-binding protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457944 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  +HGG NWGDIVLE+ ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGSHGGGNWGDIVLENSSSDADGF 59

[Close]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match: A0A6J1GVU2 (VAN3-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457944 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRPSS  PLDS LEFLSRSWRVSPSTH VNS+IP  +HGG NWGDIVLE+ ++   GF
Sbjct: 1  MSRPSSLAPLDSSLEFLSRSWRVSPSTHLVNSRIPAGSHGGGNWGDIVLENSSSDADGF 59

[Close]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match: A0A1S3AWY2 (VAN3-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103483679 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 40/59 (67.80%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 1  MSRPSSHTPLDSFLEFLSRSWRVSPSTHFVNSKIPTATHGGRNWGDIVLEDLAATPSGF 60
          MSRP++HTPLDS LEFLSRSWRVSPST  + SKIPT T  G   GDIVLED  +   GF
Sbjct: 1  MSRPTTHTPLDSSLEFLSRSWRVSPSTSHL-SKIPTTTRAG---GDIVLEDSGSDAEGF 55

The following BLAST results are available for this feature:
BLAST of Bhi11G000102 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000102 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000102 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881991.13.7e-1981.36VAN3-binding protein isoform X1 [Benincasa hispida][more]
XP_038882009.13.7e-1981.36VAN3-binding protein isoform X3 [Benincasa hispida][more]
XP_038882000.13.7e-1981.36VAN3-binding protein isoform X2 [Benincasa hispida][more]
XP_022979231.15.9e-1776.27VAN3-binding protein-like isoform X2 [Cucurbita maxima][more]
XP_022979230.15.9e-1776.27VAN3-binding protein-like isoform X1 [Cucurbita maxima][more]
BLAST of Bhi11G000102 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ISN52.8e-1776.27VAN3-binding protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479021... [more]
A0A6J1IQ722.8e-1776.27VAN3-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479021... [more]
A0A6J1GX283.1e-1672.88VAN3-binding protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114579... [more]
A0A6J1GVU23.1e-1672.88VAN3-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114579... [more]
A0A1S3AWY21.5e-1067.80VAN3-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103483679 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000102Bhi11M000102mRNA