Bhi11G000643 (gene) Wax gourd (B227) v1

Overview
NameBhi11G000643
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr11: 20410333 .. 20410671 (-)
RNA-Seq ExpressionBhi11G000643
SyntenyBhi11G000643
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTGAGAATTTCTCGGGAATTCGTTGATAGTGACCTTCATTATTATATTATTAGATAAAGGGTAAAGGAAAAAAAACCAAAGCGTCGGAGCTGACAATTACGAGAAACGTCGATTCCTTCGGAATACAGGTTCTCTTGGAATCTGATTCTGAGAAAGCGGAGGAATCATCCGTGAATCATCCCCCCGCTGATTCAGTTTCTGTTCCGGAATCGGAAGCAGTGGCTAGATCTTCACGCGTGGTCCCCGACTCTCTCATTATGCAAGCAAGCAGCGGTTCAACTCTACACCGCTTTTGCATCAATTCCTTCCCAGTTTTGGGTCTCACTCCCTGA

mRNA sequence

ATGTTGATAAAGGGTAAAGGAAAAAAAACCAAAGCGTCGGAGCTGACAATTACGAGAAACGTCGATTCCTTCGGAATACAGGTTCTCTTGGAATCTGATTCTGAGAAAGCGGAGGAATCATCCGTGAATCATCCCCCCGCTGATTCAGTTTCTGTTCCGGAATCGGAAGCAGTGGCTAGATCTTCACGCGTGGTCCCCGACTCTCTCATTATGCAAGCAAGCAGCGGTTCAACTCTACACCGCTTTTGCATCAATTCCTTCCCAGTTTTGGGTCTCACTCCCTGA

Coding sequence (CDS)

ATGTTGATAAAGGGTAAAGGAAAAAAAACCAAAGCGTCGGAGCTGACAATTACGAGAAACGTCGATTCCTTCGGAATACAGGTTCTCTTGGAATCTGATTCTGAGAAAGCGGAGGAATCATCCGTGAATCATCCCCCCGCTGATTCAGTTTCTGTTCCGGAATCGGAAGCAGTGGCTAGATCTTCACGCGTGGTCCCCGACTCTCTCATTATGCAAGCAAGCAGCGGTTCAACTCTACACCGCTTTTGCATCAATTCCTTCCCAGTTTTGGGTCTCACTCCCTGA

Protein sequence

MLIKGKGKKTKASELTITRNVDSFGIQVLLESDSEKAEESSVNHPPADSVSVPESEAVARSSRVVPDSLIMQASSGSTLHRFCINSFPVLGLTP
Homology
[Close]
BLAST of Bhi11G000643 vs. NCBI nr
Match: XP_002535190.1 (uncharacterized protein LOC8269616 [Ricinus communis] >XP_015584134.1 uncharacterized protein LOC8269562 [Ricinus communis] >EEF27191.1 conserved hypothetical protein [Ricinus communis] >EEF27241.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-04
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 22  DSFGIQVLLESDSEKAEESSVNHPPADSVSVPESEAVARSSRVVP 67
           DSFGIQVLLES S K  ESSVN PPAD V+VP  E  ARS  VVP
Sbjct: 82  DSFGIQVLLESYSSKEGESSVNQPPADQVAVPVPEEAARSPHVVP 126

[Close]
BLAST of Bhi11G000643 vs. ExPASy TrEMBL
Match: B9TA66 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2058760 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.4e-05
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 22  DSFGIQVLLESDSEKAEESSVNHPPADSVSVPESEAVARSSRVVP 67
           DSFGIQVLLES S K  ESSVN PPAD V+VP  E  ARS  VVP
Sbjct: 82  DSFGIQVLLESYSSKEGESSVNQPPADQVAVPVPEEAARSPHVVP 126

The following BLAST results are available for this feature:
BLAST of Bhi11G000643 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000643 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi11G000643 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_002535190.11.3e-0471.11uncharacterized protein LOC8269616 [Ricinus communis] >XP_015584134.1 uncharacte... [more]
BLAST of Bhi11G000643 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B9TA666.4e-0571.11Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2058760 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000643Bhi11M000643mRNA