Bhi09G002690 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002690
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	F-box protein GID2-like
Location	chr9: 83692765 .. 83695329 (+)
RNA-Seq Expression	Bhi09G002690
Synteny	Bhi09G002690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTTCAATCCTCAATCCTCAATACCCAATTTCCCATTTCTTCCTTATCTTTCTCCCTCAAATTCTCCTCTTTTTTCCCCAATCCCTCCCTGTTTTTCCTTTCTTTTCCATCATTATTAGCTTTTATGGTCACAATTAAAGCTGACCCACAATGGTTTCTGTCAATCCTCTAAACTTGTCTCTCAATTTCACCGTTTCTTTTCATTAGATAGACTGATAAAGGGGATTTGCAATTTGTTTGGAGATGAAGCGAGTTGTTCCAGATGGGGATGGGGATCGGAAGACGGGGAAGAAACCTAGGGCGGAGACCCAAGATTGTGCCGGAGGAGGAGACCCTTCCGACAGGACTGGATTTATGAATTTGGATGATAATTTGCTGTTCGAGGTTTTTAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCGTGTGTGAGCAAGCAATGGCACAAAACCGCTGAAGATGAGCGGCTTTGGGAGCTGATCTGCACCAGACACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTGGCCCTCGGTGGCTTCCGTCGCCTTCACTCTCTTTTCATCTGGCCTCTCACCAAGCCCCAATCCTCGTCTTCCTCCTCCTCCACATCTTCGTCGGCGTCCTCTTCCTCGTCGGCGTCTTGGTCTCCGTTTCCAGCGATGATTGGATCGAAACCGCCAGCCCGGTGGGGGAAGGATGAGGTCCATCTCTCGCTGTCCCTTCTCTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGCAGATGAGTGGTGTGGCTGTGGCATATTCAGTCCATTTAACCAATTTGGTTTCAAGTTTGGCAATTGAAATTTCCCTTTCAATGTGTTTTGGATTTGATCTGGGGTTGTTTTCTTTTTCTCTTTCTTTTTTGGTTAATTAGATCTGTATCCGGTTTGGGTGTGTACTTTATAAGACGACATAAATTAAATCTCTAACTTTGTGTATTATCCGTCTGATTACATCTTCATTATGATACATGAAAATGAAAAGGATTGGGGTTGAATTGTAGGAGAGAAGAAGATGACCAATAAAAGGAAAAGCTGTGATTGAGTGAAATAATAAAAAGGAAAGAGAAGAGAAGAGAGGACAGACGTAAAAATGGGGATGGATGTGGCATTTCCAGGTTTGGTGTTGAGAATTGAGAGTAATGAGAGAAGAAAATGGTAATAGAAATGCCCCCATAAGCTCGCAGACAAATAGCATAAGACAAATACAGGAGTTGGCTTTTCGAAATTACAGAACACTTAGATCTGAGAAAAGCCAAAGAGCCAAAACCCAAATACCCAAACCCTATGTCAAAAATGCTGTTTTTGAGTCCTTTCTCTTCATCTCTCATACTAATCTCCTCTTCTATTATTAATTCAGCCTTTATGCCTATTTGTTAGCCTAATTAATTCTCATTTCTTTATTACATCAAGTTTCTCAATTATTTTCCATTTATGGTATTTCTCATGATAACTTCTTTTTGAAACACTTTATATTATATTTGACAAATGTGGGGTGGAGTACAATCAAACCGTTCGTTTTATGGAAGCTATCGTATCTACTTTCACCATTAGCTTATATTCGATGTATATACAAATAAATCGAAATATAAAAATATCTTTAAACATTACGACAAAAAATAAAGGATTTTTTAGGATACCAAGATGAATTGTCTTTTTTAAAGATTATTTTGTTGAATAATGTGACTAATTTATTTATAACCATCTCTATAAGTTACTATTTTAGAGTGTTTCTTCATGTGAAGAGACTATTTGTCCATAATGATTTGTTTGTATTAAGACTCGTTTTTCTTATAGGTTTTAAATGAATTTGATATTGTAGTGTACAATTTGTTTCAATATGATGAATCAAGTAAATAGTTGTTTGCATTCATAGTAGGAAATAGTTATTTTTAAATTAAATTTATTTGGAGATGTAAGTGTTGTTTCATTCTATATGAACCAAGAATAAGAGATAGAGGAATAAAAGGGTGTTAACATCGTTTTACCATTAACAAATTGATTAAACCTCTTTCTTTTTTCTTTTTTTTTTTTTTTACAAGGTGGCATAGAGAAGCGCAC

mRNA sequence

GTTTTTTCAATCCTCAATCCTCAATACCCAATTTCCCATTTCTTCCTTATCTTTCTCCCTCAAATTCTCCTCTTTTTTCCCCAATCCCTCCCTGTTTTTCCTTTCTTTTCCATCATTATTAGCTTTTATGGTCACAATTAAAGCTGACCCACAATGGTTTCTGTCAATCCTCTAAACTTGTCTCTCAATTTCACCGTTTCTTTTCATTAGATAGACTGATAAAGGGGATTTGCAATTTGTTTGGAGATGAAGCGAGTTGTTCCAGATGGGGATGGGGATCGGAAGACGGGGAAGAAACCTAGGGCGGAGACCCAAGATTGTGCCGGAGGAGGAGACCCTTCCGACAGGACTGGATTTATGAATTTGGATGATAATTTGCTGTTCGAGGTTTTTAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCGTGTGTGAGCAAGCAATGGCACAAAACCGCTGAAGATGAGCGGCTTTGGGAGCTGATCTGCACCAGACACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTGGCCCTCGGTGGCTTCCGTCGCCTTCACTCTCTTTTCATCTGGCCTCTCACCAAGCCCCAATCCTCGTCTTCCTCCTCCTCCACATCTTCGTCGGCGTCCTCTTCCTCGTCGGCGTCTTGGTCTCCGTTTCCAGCGATGATTGGATCGAAACCGCCAGCCCGGTGGGGGAAGGATGAGGTCCATCTCTCGCTGTCCCTTCTCTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGCAGATGAGTGGTGGCATAGAGAAGCGCAC

Coding sequence (CDS)

ATGAAGCGAGTTGTTCCAGATGGGGATGGGGATCGGAAGACGGGGAAGAAACCTAGGGCGGAGACCCAAGATTGTGCCGGAGGAGGAGACCCTTCCGACAGGACTGGATTTATGAATTTGGATGATAATTTGCTGTTCGAGGTTTTTAAGCATGTGGATGCCAGGACTCTGGCTATGGCGGCGTGTGTGAGCAAGCAATGGCACAAAACCGCTGAAGATGAGCGGCTTTGGGAGCTGATCTGCACCAGACACTGGGCCAACACCGGCTGCGGCAACCAACAACTCCGATCTGTAGTTCTGGCCCTCGGTGGCTTCCGTCGCCTTCACTCTCTTTTCATCTGGCCTCTCACCAAGCCCCAATCCTCGTCTTCCTCCTCCTCCACATCTTCGTCGGCGTCCTCTTCCTCGTCGGCGTCTTGGTCTCCGTTTCCAGCGATGATTGGATCGAAACCGCCAGCCCGGTGGGGGAAGGATGAGGTCCATCTCTCGCTGTCCCTTCTCTCAATTCGTTACTACGAGAAGATGAATTTCAGCAACAGAGGCAGCAGATGA

Protein sequence

MKRVVPDGDGDRKTGKKPRAETQDCAGGGDPSDRTGFMNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGSR

Homology

[Close]

BLAST of Bhi09G002690 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 187.6 bits (475), Expect = 9.1e-48
Identity = 98/184 (53.26%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 1   MKRVVPD----GDGDRKTGKKPRAETQDCAGGGDPSDRTGFMNLDDNLLFEVFKHVDART 60
           MKR   D    GD   +T KK ++  +         +  GF NLD+NL++EV KHVDA+T
Sbjct: 1   MKRSTTDSDLAGDAHNETNKKMKSTEE---------EEIGFSNLDENLVYEVLKHVDAKT 60

Query: 61  LAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPL 120
           LAM++CVSK WHKTA+DERLWELICTRHW N GCG  QLRSVVLALGGFRRLHSL++WPL
Sbjct: 61  LAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPL 120

Query: 121 TKPQSSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMN 180
           +KP                               P AR+GKDE+ L+LSLLSIRYYEKM+
Sbjct: 121 SKP------------------------------NPRARFGKDELKLTLSLLSIRYYEKMS 145

[Close]

BLAST of Bhi09G002690 vs. TAIR 10
Match: AT5G48170.1 (F-box family protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-11
Identity = 40/138 (28.99%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 38  MNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS 97
           +N   ++L E+ + +D  +L  AACV + W   A ++ +WE +C R  +     +  LRS
Sbjct: 28  INDHHDVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQVSPR--PSLSLRS 87

Query: 98  VVLALGGFRRLHSLFIWPLTKPQSSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGK 157
           VV ALGG+R L+ L I P                              ++   P   W +
Sbjct: 88  VVSALGGYRCLYFLCIRP------------------------------VLARLPKLLWTR 133

Query: 158 DEVHLSLSLLSIRYYEKM 176
           D++ LSLSL  + YYE++
Sbjct: 148 DQLQLSLSLYCVHYYERL 133

[Close]

BLAST of Bhi09G002690 vs. TAIR 10
Match: AT1G21760.1 (F-box protein 7 )

HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 18/50 (36.00%), Postives = 24/50 (48.00%), Query Frame = 0


Query: 40  LDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTG 90
           L D LLFEVF  +    L  A+CV ++W  T  +   W   C + W   G
Sbjct: 62  LPDELLFEVFARMMPYDLGRASCVCRKWRYTVRNPMFWRNACLKAWQTAG 111

[Close]

BLAST of Bhi09G002690 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 98/184 (53.26%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 1   MKRVVPD----GDGDRKTGKKPRAETQDCAGGGDPSDRTGFMNLDDNLLFEVFKHVDART 60
           MKR   D    GD   +T KK ++  +         +  GF NLD+NL++EV KHVDA+T
Sbjct: 1   MKRSTTDSDLAGDAHNETNKKMKSTEE---------EEIGFSNLDENLVYEVLKHVDAKT 60

Query: 61  LAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPL 120
           LAM++CVSK WHKTA+DERLWELICTRHW N GCG  QLRSVVLALGGFRRLHSL++WPL
Sbjct: 61  LAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPL 120

Query: 121 TKPQSSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMN 180
           +KP                               P AR+GKDE+ L+LSLLSIRYYEKM+
Sbjct: 121 SKP------------------------------NPRARFGKDELKLTLSLLSIRYYEKMS 145

[Close]

BLAST of Bhi09G002690 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 64/140 (45.71%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 39  NLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSV 98
           +L ++L+FEV +  +ARTLA AACVS+ W + AEDERLWE  C R WAN G   +QLR+V
Sbjct: 75  DLGEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAACVREWANLGFSERQLRAV 134

Query: 99  VLALGGFRRLHSLFIWPLTKPQSSSSSSSTSSSASSSSSASW--SPFPAMIGSK-PPARW 158
           VL+LGGFRRLH+++I PL                       W  +  P   G + PP R 
Sbjct: 135 VLSLGGFRRLHAVYIRPL----------------------QWRGAGVPRQQGRRQPPVRL 192

Query: 159 GKDEVHLSLSLLSIRYYEKM 176
           G+D+V LSLSL SI +++ M
Sbjct: 195 GRDQVQLSLSLFSIGFFQNM 192

[Close]

BLAST of Bhi09G002690 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-10
Identity = 40/138 (28.99%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 38  MNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRS 97
           +N   ++L E+ + +D  +L  AACV + W   A ++ +WE +C R  +     +  LRS
Sbjct: 28  INDHHDVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQVSPR--PSLSLRS 87

Query: 98  VVLALGGFRRLHSLFIWPLTKPQSSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGK 157
           VV ALGG+R L+ L I P                              ++   P   W +
Sbjct: 88  VVSALGGYRCLYFLCIRP------------------------------VLARLPKLLWTR 133

Query: 158 DEVHLSLSLLSIRYYEKM 176
           D++ LSLSL  + YYE++
Sbjct: 148 DQLQLSLSLYCVHYYERL 133

[Close]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL
Match: A0A0A0L2H5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641710 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87
Identity = 172/189 (91.01%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MKRVVPDGDGDRKTGKKPRAETQDC---AGGGDPSDRTGFMNLDDNLLFEVFKHVDARTL 60
           MKRVVPDG GDRK GKKP+AETQD     GG D SD+TGFMNLDDNLLFEVFKHVDARTL
Sbjct: 1   MKRVVPDGVGDRKMGKKPKAETQDFTRGGGGEDCSDKTGFMNLDDNLLFEVFKHVDARTL 60

Query: 61  AMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLT 120
           AMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLT
Sbjct: 61  AMAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLT 120

Query: 121 KPQ-----SSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180
           KPQ     SSSSSSS+SSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY
Sbjct: 121 KPQSSSSSSSSSSSSSSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180

Query: 181 EKMNFSNRG 182
           EKMNFSNRG
Sbjct: 181 EKMNFSNRG 189

[Close]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL
Match: A0A5A7VFE5 (F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002980 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.7e-87
Identity = 172/189 (91.01%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MKRVVPDGDGDRKTGKKPRAETQDC--AGGGDPSDRTGFMNLDDNLLFEVFKHVDARTLA 60
           MKRVV DG GDRK GKKP+AETQD    GG D SD+TGFMNLDDNLLFEVFKHVDARTLA
Sbjct: 1   MKRVVSDGVGDRKMGKKPKAETQDFTRGGGEDCSDKTGFMNLDDNLLFEVFKHVDARTLA 60

Query: 61  MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK 120
           MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK
Sbjct: 61  MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK 120

Query: 121 PQSSSSS------SSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180
           PQSSSSS      SSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY
Sbjct: 121 PQSSSSSSSSSSPSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180

Query: 181 EKMNFSNRG 182
           EKMNFSNRG
Sbjct: 181 EKMNFSNRG 189

[Close]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL
Match: A0A1S3BV18 (F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103493580 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.7e-87
Identity = 172/189 (91.01%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MKRVVPDGDGDRKTGKKPRAETQDC--AGGGDPSDRTGFMNLDDNLLFEVFKHVDARTLA 60
           MKRVV DG GDRK GKKP+AETQD    GG D SD+TGFMNLDDNLLFEVFKHVDARTLA
Sbjct: 1   MKRVVSDGVGDRKMGKKPKAETQDFTRGGGEDCSDKTGFMNLDDNLLFEVFKHVDARTLA 60

Query: 61  MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK 120
           MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK
Sbjct: 61  MAACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTK 120

Query: 121 PQSSSSS------SSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180
           PQSSSSS      SSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY
Sbjct: 121 PQSSSSSSSSSSPSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYY 180

Query: 181 EKMNFSNRG 182
           EKMNFSNRG
Sbjct: 181 EKMNFSNRG 189

[Close]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL
Match: A0A6J1ILD7 (F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111477283 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.6e-84
Identity = 162/181 (89.50%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1   MKRVVPDGDGDRKTGKKPRAETQDCAGGGDPSDRTGFMNLDDNLLFEVFKHVDARTLAMA 60
           MKRVVP+G GDRKT KKPRA + DC GGG  SD+TGF+NLDDNLLFEVFKHVDARTLAMA
Sbjct: 1   MKRVVPEGKGDRKTEKKPRAVSHDCDGGG-VSDKTGFLNLDDNLLFEVFKHVDARTLAMA 60

Query: 61  ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ 120
           ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ
Sbjct: 61  ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ 120

Query: 121 SSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR 180
           SSSSSSS S+S+S+SSS+ WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNF +R
Sbjct: 121 SSSSSSS-STSSSTSSSSPWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFGSR 179

Query: 181 G 182
           G
Sbjct: 181 G 179

[Close]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL
Match: A0A6J1FA22 (F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111443649 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.1e-84
Identity = 165/181 (91.16%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1   MKRVVPDGDGDRKTGKKPRAETQDCAGGGDPSDRTGFMNLDDNLLFEVFKHVDARTLAMA 60
           MKRVVP+G GDRKT KKPRA + DC GGG  SD+TGFMNLDDNLLFEVFKHVDARTLAMA
Sbjct: 1   MKRVVPEGKGDRKTEKKPRAVSHDCDGGG-VSDKTGFMNLDDNLLFEVFKHVDARTLAMA 60

Query: 61  ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ 120
           ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ
Sbjct: 61  ACVSKQWHKTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQ 120

Query: 121 SSSSSSSTSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNR 180
             SSSSSTSSSASSSS   WSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFS+R
Sbjct: 121 --SSSSSTSSSASSSS--PWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSSR 176

Query: 181 G 182
           G
Sbjct: 181 G 176

The following BLAST results are available for this feature:

BLAST of Bhi09G002690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24210.1	9.1e-48	53.26	F-box family protein	[more]
AT5G48170.1	3.0e-11	28.99	F-box family protein	[more]
AT1G21760.1	2.1e-04	36.00	F-box protein 7	[more]

BLAST of Bhi09G002690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STX3	1.3e-46	53.26	F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1	[more]
Q7XAK4	3.3e-26	45.71	F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1	[more]
Q9LUB6	4.3e-10	28.99	F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1	[more]

BLAST of Bhi09G002690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2H5	2.6e-87	91.01	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641710 PE=4 ...	[more]
A0A5A7VFE5	7.7e-87	91.01	F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BV18	7.7e-87	91.01	F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103493580 PE=4 SV=1	[more]
A0A6J1ILD7	3.6e-84	89.50	F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111477283 PE=4 SV=1	[more]
A0A6J1FA22	6.1e-84	91.16	F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111443649 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 40..80 e-value: 0.0054 score: 26.0
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 37..81 e-value: 1.4E-7 score: 31.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 34..80 score: 9.338503
None	No IPR available	GENE3D	1.20.1280.50		coord: 30..140 e-value: 2.7E-12 score: 48.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR12874:SF22	F-BOX PROTEIN GID2-LIKE	coord: 14..178
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 14..178
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 30..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002690	Bhi09M002690	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding