Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA mRNA sequence
ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA Coding sequence (CDS)
ATGGAAGGAGAAGGAAAGCTGATGCTGATAACTACAACTCCCATGGCTGCAATTGGAAAACTCGACACTGAAATTCAATTCGATCTTTGCAAATTCGACACCAAATTCGACGCAGCAAAAGCAGCGGAACCGCCGACGACGGAGACCAAAGCCACCGACACCTGCAACGCGATCTGCCAAACACTATCCTCCGGCACCAAATACACACACGAAGGCCCTAATAACAACAGCCCTAAGCTCAGGCTCAGTAGCGCCCCGGGAGTTCCTGGATCTGTCGCCGCCGATAAAATCCCCAATTCCTCAGCCTTCGACAGAAGCCCTAATTTCTCAATCGACGACAGAGACAACCCGGCTTTCTCTGCCGCAGACAGAAGACCGGCCTTCTCCGCCTTGCTCAGTAGCTTCAATTGCTCCACTCTCGTCAGTAGCTTAATCGGCGGGGAAGTCGAGAGCGAGATGCTGGTCCTCGGTCCTTTCTCGCCGAGAGGGAACACCGTGGAGTTTATCTGCACAATGCTGGCTCTTCAGTCATTCCAGCGAAATTGA Protein sequence
MEGEGKLMLITTTPMAAIGKLDTEIQFDLCKFDTKFDAAKAAEPPTTETKATDTCNAICQTLSSGTKYTHEGPNNNSPKLRLSSAPGVPGSVAADKIPNSSAFDRSPNFSIDDRDNPAFSAADRRPAFSALLSSFNCSTLVSSLIGGEVESEMLVLGPFSPRGNTVEFICTMLALQSFQRN
Homology
BLAST of Bhi08G000909 vs. ExPASy TrEMBL
Match:
A0A5K1FJ12 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS26126 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 3.2e-21
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 0
Query: 48 ETKATDTCNAICQTLSSGTKYTHEGPNNNSPKLRLSSAPGVPGSVAADKIPNSSAFDRSP 107 ET+AT TC I SSGTK T GP ++SP+LRL+ A GVPGSVAAD+ PNSSAF+ P Sbjct: 2 ETRATTTCTTISSVFSSGTKKTQRGPKSSSPRLRLNRAVGVPGSVAADRTPNSSAFESKP 61 Query: 108 NFSIDDRDNPAFSAADRRPAFSALLSSFNCSTLVSSLIG 147 +FS + D+P FSAAD +PAFSALL+S N TL SL G Sbjct: 62 SFSTVESDSPNFSAADSKPAFSALLNSLNSCTLDRSLTG 100
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5K1FJ12 3.2e-21 60.61 Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS26... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G G A A G G A G A A G G A A A G C T G A T G C T G A T A A C T A C A A C T C C C A T G G C T G C A A T T G G A A A A C T C G A C A C T G A A A T T C A A T T C G A T C T T T G C A A A T T C G A C A C C A A A T T C G A C G C A G C A A A A G C A G C G G A A C C G C C G A C G A C G G A G A C C A A A G C C A C C G A C A C C T G C A A C G C G A T C T G C C A A A C A C T A T C C T C C G G C A C C A A A T A C A C A C A C G A A G G C C C T A A T A A C A A C A G C C C T A A G C T C A G G C T C A G T A G C G C C C C G G G A G T T C C T G G A T C T G T C G C C G C C G A T A A A A T C C C C A A T T C C T C A G C C T T C G A C A G A A G C C C T A A T T T C T C A A T C G A C G A C A G A G A C A A C C C G G C T T T C T C T G C C G C A G A C A G A A G A C C G G C C T T C T C C G C C T T G C T C A G T A G C T T C A A T T G C T C C A C T C T C G T C A G T A G C T T A A T C G G C G G G G A A G T C G A G A G C G A G A T G C T G G T C C T C G G T C C T T T C T C G C C G A G A G G G A A C A C C G T G G A G T T T A T C T G C A C A A T G C T G G C T C T T C A G T C A T T C C A G C G A A A T T G A 50 100 150 200 250 300 350 400 450 500 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..82
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..85
Relationships
The following mRNA feature(s) are a part of this gene: