Chy12G211950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G211950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	FAS1 domain-containing protein
Location	chrH12: 8449603 .. 8453440 (-)
RNA-Seq Expression	Chy12G211950
Synteny	Chy12G211950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTGGTTTCCGGACGACGTGGGTATTTCAGTGGACATGGGTAGCAAACAACAGACGTCGTTGGAGATGACAGTCAGCGGGTGTCGTTTGCGGATTTGTGAGCGGAGATGCAAATCTGTGAGGGTAAGTCAACAATATGCAGCGGATGTGTGGATGTGTGAGGGAATTTGTTTGCAGATCTAAACTAGTACATATTGGATGTGAGCGGAGATGCAGCAGATTTGTGGATCGAAAGGGTGGCGACGGATCAGAGGGGCGACAGTGGATCTACAAATGTGAAGGGCGCCGACTAGGTCAAAAAAAGAGGCTCTGTTACCATGTTGTTTTCTTGAAATAATTCTTTATTTGATTAATAAATTACCAGAGGTACAAGCCTAATTATAGGCAAAGAACAATACACTTAAGAAAAGAATATTATAAGAATAATATCTCCAAAAATAATATAATTACGACAAAAGTATATATATATATATATTTATTTATTTATTAATTAATTTAGTGGTCTAATCGTGTAGAAACTCTTTCTATGGGATATCTTCATTTACATGTCTGTACACTAATGATTTGGATCAAGTCACCGGGACAAGATACTCAACTTTATCTATATTACCAATAGATACTTGAGGTTATTATTTGAACATAGTCCACTTATATTTCAATCAATAACTTTAGATATTATATGTGATAAATAATTTAATATTACATATTCAATAATTAATTAAATTATTATTAAATAATTAATTAACCACAAGGCTTTTGAACACGAATTCTAACATTCTCTCACTTGCATTAAAGCAAATGAGACATGTATCTTAGGACTAACTCTATCCTCAACATGTTCTCTCACTTGCCCTGAGAAAAGACATGTCTTGTAATTCCTAATATTCTAGATGACCCCAAATACTCTAAATTCTGAGCATTTTTATAAATCAAAACATATGTGAATTAAAAAAGCTATATGTCTTACCACAAAAATGAAGAGATGAGAGCACTATGCAGCGGAATAAACTTTAAACAAAACCATAAACTCAATTTAATTGGAAACTTAAAAATACTAAATACATTGAAAAAAAAAACTATAGAAACTAATATCTATAAGACTAAACATGCTTTTAAAATAAAACAGGAGTTACAGATAAGAAAACATACTCTCATTGACAACTTTGTCTATTTTGACATATCAATAACTCACTCTTCTTTAGTCTGAAGAGGGAAGTTGAGAGAATATGGAAACATGGAAAACCACCCATGTTCCTGGTTAATTTAATAAATTAATATAATTAATTAAGTTAATAATTAATTAATATCTCATTTAAATCATATTTAAATGAATATCTCTCACATAACCTATAGTTTTAATTTAATCAAATCAAATTTAATTAAATAAAATTAAACTAAACTATTAATTAAATTTTAAATAATTAATTGAGATATTTAATTTAATCCAAATTTGAATCATATTCAAATATAAATTTCTCTTTAATGTGTATCATATATATATATATATATTAAATTTTAACCTATAGTTTTAATATTAATCTAATTCACATTAAATCAATATTTGAACTCATTCAAATATTTTATTCTCTCATAAATTAATTTTGATTCATATGTAAAATTAAATTTATATAATAAAGTTTAATTAAAATATAAACCTTATATCATAATGTATCATAATGTATCACCATACATTATATTAATTTCTAAAGTAAATTTGAACATTTCAAATTACAACCAATATAAATAAATCTCATTACCCTTTACGAGCTAGGAAAGGGACCTAATGAACCTACAGATCAGAAGCTACAACGATATGAGATTAATTATTAGCTAAACTCATTAACCACATTAATCAATATTTGTTAACTAGATCTAAATGATTTTGCTAAATCTAAATGATCTTTGTACAAGATCTTGTAGCCCTATACCCAATCTAAACAATCTTGTATCCTTGTATCCTTGTATCTCTTGTATCTAATCTAAATGATCTTGCACATCCAGTCTAAACGATCTTGTACATCTAGTCTAAACGATATCTATTAGTGATAGTGCTCTATCTCTGTTTATTTGGAACTCGACAACTGATCATTTAGATATTGATACACGATCGTATAGTGAAAAAAAGAACACAATACTTGACTATGAAAAAAGGATAAGAAAAAAAGTATTATCTTTATGAAAAAGATGACGTTGAAGATGAGATGAAGAAAAAATAAATAAATTCTGGAAGAGGAGTTGAAGAAATTTTGGAAAGACAAATCTAAAATTTATGAAAAAATTAACTCAAATTATACTAGGACTTTTTTTATTTTATTATAATGGACCATAAATATTTTCAATTTTTTTATATATATATACAAATTAACCTATAAAATATAACAAATCATTTTCAAAATCATCCATTTGAAATTAGTTAGGTAGTAAAACTTTTGTGCATGTCAATGAAATTTACATCATTCACAATGAGTAATGTGTCATTAACCTGAAATCATGAGAAATATTCACTTGAATACAATAAATGTTTTTCTTTATATACATTATTAATCTTTATTCAAAAAGTCGTAGGTTATGAAACTTCTATCAAACCCTATATTTCATGATCTAATTGTCTGATTCATTATTCAAACAATTAACATATACAATTTTGTTAGTTCTTTCCAATCTGAAAATTAAACTAATTTTCTCTAAATTCTAAAAATAATAATAAAAAAAAAGCTTTTTTTAAGATTACTTTTCTTTTTCTTTTTTCCAAAACTTGGTTTGGGATGTTGACAGATACTCCTAAAAAGTAGATAAGATAAACAAATTAATATGTGAGAGTGGTTGTTTTTTTCATATTTTTTCTTCTAAAAAAAGCTTGGGGCGGTTGTTTGTATAGGTTTAATCAAACATGAAAAAGTTACAAGAAAGAGAACTAAAGAGATTATAAAACTGAAGTTTTGAGTCAATTGAGTTATGATTTAACGTGATATCAAAGCAAGAAAGATGATAAAGATGATAATTAATTTTATTATAACCCCCATCCACTCTGATTGTTTGAGTTTGAGAGTACAAAGTTAATAAAGAGTTGGGAATGTTAAAAAGTTTCACAGACAAAGCAAAAAAAAAAAAAAAAAGGAAGCTAAATTCAGATCAACACTGACATAAGGAAAATATGGGTATGATCCATGACTTTCTCATGTGCAACCTAATCCCTAACCAAAAAACATACATAAAACACATTATTGAAAAATTCATTAATAAATAACTTCAAATCCCTCATTTGTTTCTTGGTCCATTCAACACCTAAATAATGGACATAATTATTCCTAGAATTTGTGCTCTTGTTTCTCTCATATTCTTAATTAATGTCTCTTCAGCTGTCTCAATAGTTTCATCCCAAACCTCAAACAAAACAGATCTCCAAGCTGCCATTGAAGACATGAAGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACATCACTACTCAACTGACCCTAAAAGAAATCACCTTTTTCATCCCCCAAGACCCCCAGATCTCCAATATCTCCATCGCTGTCGACCGTCTCGAGACATTCGTGCTCAGCCATATGATCCTCATGCCGCTTCAATTCAGTGACTTGATTCGATTTCCGACAGGTTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCAGAATCCATAACAATGGAAGAGGCCATTTTGTTGTGAATAATGCTGTAGTTAATGTTCCTAATGTTTGTTCTAGTTCTTTGGGTATTAAGTGCCATGGGGTTAACAAGGTCATAAATTATGGTAGAGCTAGTTATGGTAATCTTAATAATGAACATTTCTAG

mRNA sequence

ATGGATTTCTGGTTTCCGGACGACGTGGGTATTTCAGTGGACATGGGTAGCAAACAACAGACGTCGTTGGAGATGACAGTCAGCGGGTGTCGTTTGCGGATTTCTGTCTCAATAGTTTCATCCCAAACCTCAAACAAAACAGATCTCCAAGCTGCCATTGAAGACATGAAGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACATCACTACTCAACTGACCCTAAAAGAAATCACCTTTTTCATCCCCCAAGACCCCCAGATCTCCAATATCTCCATCGCTGTCGACCGTCTCGAGACATTCGTGCTCAGCCATATGATCCTCATGCCGCTTCAATTCAGTGACTTGATTCGATTTCCGACAGGTTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCAGAATCCATAACAATGGAAGAGGCCATTTTGTTGTGAATAATGCTGTAGTTAATGTTCCTAATGTTTGTTCTAGTTCTTTGGGTATTAAGTGCCATGGGGTTAACAAGGTCATAAATTATGGTAGAGCTAGTTATGGTAATCTTAATAATGAACATTTCTAG

Coding sequence (CDS)

ATGGATTTCTGGTTTCCGGACGACGTGGGTATTTCAGTGGACATGGGTAGCAAACAACAGACGTCGTTGGAGATGACAGTCAGCGGGTGTCGTTTGCGGATTTCTGTCTCAATAGTTTCATCCCAAACCTCAAACAAAACAGATCTCCAAGCTGCCATTGAAGACATGAAGGCCCAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACATCACTACTCAACTGACCCTAAAAGAAATCACCTTTTTCATCCCCCAAGACCCCCAGATCTCCAATATCTCCATCGCTGTCGACCGTCTCGAGACATTCGTGCTCAGCCATATGATCCTCATGCCGCTTCAATTCAGTGACTTGATTCGATTTCCGACAGGTTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCAGAATCCATAACAATGGAAGAGGCCATTTTGTTGTGAATAATGCTGTAGTTAATGTTCCTAATGTTTGTTCTAGTTCTTTGGGTATTAAGTGCCATGGGGTTAACAAGGTCATAAATTATGGTAGAGCTAGTTATGGTAATCTTAATAATGAACATTTCTAG

Protein sequence

MDFWFPDDVGISVDMGSKQQTSLEMTVSGCRLRISVSIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRASYGNLNNEHF*

Homology

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BLAST of Chy12G211950 vs. ExPASy Swiss-Prot
Match: P0DH64 (FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_448915 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-08
Identity = 37/134 (27.61%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 47  TDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNI--SIAVDRLET 106
           +D+Q  + +M  Q F   A + Q L   T + ++  T  IP +  I+ +  +++ + +  
Sbjct: 70  SDVQPLVSNMIGQGFTVAAAVAQSLQ--TLIPIRS-TLLIPSNNAIAGVDANLSQEDIIN 129

Query: 107 FVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSS 166
            +  H++  P  F  L R   G+ +P+     MI + +N  G+F +N   +  P+VCSS+
Sbjct: 130 TLQYHVLTFPTSFEALSRNDVGAELPTMLQGEMITVTSNSPGNFTLNEVNITHPDVCSST 189

Query: 167 LGIKCHGVNKVINY 179
             I CHG+++V+ Y
Sbjct: 190 RFIACHGIDRVLAY 200

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BLAST of Chy12G211950 vs. ExPASy TrEMBL
Match: A0A1S3CJM9 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN=LOC103501717 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 139/153 (90.85%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 36  VSIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNI 95
           +++ SSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQD Q+SNI
Sbjct: 18  INVSSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDSQLSNI 77

Query: 96  SIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV 155
           SIAV+ LE FVLSH+I+MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV
Sbjct: 78  SIAVNHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV 137

Query: 156 NVPNVCSSSLGIKCHGVNKVINYGRASYGNLNN 189
           NVPNVCSSSLGIKCHGVNKVINYG  +YGNLNN
Sbjct: 138 NVPNVCSSSLGIKCHGVNKVINYGGVTYGNLNN 170

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BLAST of Chy12G211950 vs. ExPASy TrEMBL
Match: A0A0A0LTE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 70  MLNITTQLTLKEITFFIPQDPQISNISIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIV 129
           MLNITTQLTLKEITFFIPQDPQISNISIAVDRLE FVLSHMILMPLQFSDLIRFPTGSIV
Sbjct: 1   MLNITTQLTLKEITFFIPQDPQISNISIAVDRLEAFVLSHMILMPLQFSDLIRFPTGSIV 60

Query: 130 PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRASYGNLNNE 189
           PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRA+YGNL+NE
Sbjct: 61  PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRATYGNLSNE 120

Query: 190 HF 192
            F
Sbjct: 121 LF 122

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BLAST of Chy12G211950 vs. ExPASy TrEMBL
Match: A0A6J1EI57 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3662 GN=LOC111434302 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57
Identity = 117/148 (79.05%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 41  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISIAVD 100
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP DPQ+SNISI  D
Sbjct: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61

Query: 101 RLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 160
           RLE+FVLSH I+MPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V VPNV
Sbjct: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121

Query: 161 CSSSLGIKCHGVNKVINYGRASYGNLNN 189
           CSSS GIKCHG++KV++YG A Y N NN
Sbjct: 122 CSSSEGIKCHGIDKVLDYGNA-YDNHNN 148

[Close]

BLAST of Chy12G211950 vs. ExPASy TrEMBL
Match: A0A6J1KFG1 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=3661 GN=LOC111495332 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.9e-56
Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 34  ISVSIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQIS 93
           IS     SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP DPQ+S
Sbjct: 20  ISAVPTMSQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLS 79

Query: 94  NISIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNA 153
           NISI  D LE+FVLSH I+MPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA
Sbjct: 80  NISIPTDHLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNA 139

Query: 154 VVNVPNVCSSSLGIKCHGVNKVINYGRASYGNLN 188
            V +PNVCSSS GIKCHG++KVI+YG A Y N N
Sbjct: 140 AVTIPNVCSSSGGIKCHGIDKVIDYGNA-YDNHN 172

[Close]

BLAST of Chy12G211950 vs. ExPASy TrEMBL
Match: A0A5D3E4N2 (FAS1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00750 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 8.1e-55
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 70  MLNITTQLTLKEITFFIPQDPQISNISIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIV 129
           MLNITTQLTLKEITFFIPQD Q+SNISIAV+ LE FVLSH+I+MPLQFSDLIRFPTGSIV
Sbjct: 1   MLNITTQLTLKEITFFIPQDSQLSNISIAVNHLEAFVLSHLIVMPLQFSDLIRFPTGSIV 60

Query: 130 PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGRASYGNLNN 189
           PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYG  +YGNLNN
Sbjct: 61  PSGYHNRMIRIHNNGRGHFVVNNAVVNVPNVCSSSLGIKCHGVNKVINYGGVTYGNLNN 119

[Close]

BLAST of Chy12G211950 vs. NCBI nr
Match: XP_011648466.2 (FAS1 domain-containing protein SELMODRAFT_448915, partial [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 4.11e-99
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 37  SIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNIS 96
           SIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNIS
Sbjct: 28  SIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNIS 87

Query: 97  IAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVN 156
           IAVDRLE FVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVN
Sbjct: 88  IAVDRLEAFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVN 147

Query: 157 VPNVCSSSLGIKCHGVNKVINYGRASYGNLNNEHF 191
           VPNVCSSSLGIKCHGVNKVINYGRA+YGNL+NE F
Sbjct: 148 VPNVCSSSLGIKCHGVNKVINYGRATYGNLSNELF 182

[Close]

BLAST of Chy12G211950 vs. NCBI nr
Match: XP_008463608.1 (PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo])

HSP 1 Score: 276 bits (706), Expect = 3.92e-92
Identity = 139/153 (90.85%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 36  VSIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNI 95
           +++ SSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQD Q+SNI
Sbjct: 18  INVSSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDSQLSNI 77

Query: 96  SIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV 155
           SIAV+ LE FVLSH+I+MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV
Sbjct: 78  SIAVNHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV 137

Query: 156 NVPNVCSSSLGIKCHGVNKVINYGRASYGNLNN 188
           NVPNVCSSSLGIKCHGVNKVINYG  +YGNLNN
Sbjct: 138 NVPNVCSSSLGIKCHGVNKVINYGGVTYGNLNN 170

[Close]

BLAST of Chy12G211950 vs. NCBI nr
Match: XP_038893487.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida])

HSP 1 Score: 271 bits (693), Expect = 4.60e-90
Identity = 138/153 (90.20%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 36  VSIVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNI 95
           V IVSSQ +N TDLQAAIEDMKA+SFYGFAILLQMLNITTQLTLKEITFFIPQDPQ+SNI
Sbjct: 24  VPIVSSQPANHTDLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNI 83

Query: 96  SIAVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVV 155
           SIAVDRLE FVLSH+I+MPL+FSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVV
Sbjct: 84  SIAVDRLEAFVLSHLIVMPLEFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVV 143

Query: 156 NVPNVCSSSLGIKCHGVNKVINYGRASYGNLNN 188
           NVPNVCSSS  IKCHGVNKVI+YGR SYGNLNN
Sbjct: 144 NVPNVCSSSESIKCHGVNKVIDYGRDSYGNLNN 176

[Close]

BLAST of Chy12G211950 vs. NCBI nr
Match: XP_023520235.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230 bits (587), Expect = 2.46e-74
Identity = 117/148 (79.05%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 41  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISIAVD 100
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP DPQ+SNISI+ D
Sbjct: 2   SQTLNHTNLIAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISISTD 61

Query: 101 RLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 160
           RLE+FVLSH I+MPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V VPNV
Sbjct: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121

Query: 161 CSSSLGIKCHGVNKVINYGRASYGNLNN 188
           CSSS GIKCHG++KV++YG A Y N NN
Sbjct: 122 CSSSEGIKCHGIDKVLDYGNA-YDNHNN 148

[Close]

BLAST of Chy12G211950 vs. NCBI nr
Match: XP_022927494.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7019381.1 FAS1 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230 bits (586), Expect = 3.49e-74
Identity = 117/148 (79.05%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 41  SQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISIAVD 100
           SQT N T+L AA+ DM+AQSFYGFAILLQMLN TTQLTL++ITFFIP DPQ+SNISI  D
Sbjct: 2   SQTLNHTNLLAAVGDMRAQSFYGFAILLQMLNATTQLTLRDITFFIPLDPQLSNISIPTD 61

Query: 101 RLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNVPNV 160
           RLE+FVLSH I+MPLQFSDLIRFPTGSIVPSGY NRMIRIHN+GRGHF+VNNA V VPNV
Sbjct: 62  RLESFVLSHSIVMPLQFSDLIRFPTGSIVPSGYRNRMIRIHNHGRGHFLVNNAAVTVPNV 121

Query: 161 CSSSLGIKCHGVNKVINYGRASYGNLNN 188
           CSSS GIKCHG++KV++YG A Y N NN
Sbjct: 122 CSSSEGIKCHGIDKVLDYGNA-YDNHNN 148

[Close]

BLAST of Chy12G211950 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-23
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 38  IVSSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQISNISI 97
           I+     N+TDL +A+ DM+ QS+ GF ILL+ LN T      +ITF +P D  IS+  I
Sbjct: 107 ILRHDNYNQTDLISAMTDMRRQSYNGFVILLRFLNDTNYFRNTDITFLMPSDNDISHADI 166

Query: 98  AVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNV 157
             + LETF+L H I   L  + ++ FP  ++VP  + +RM  I  +G     VNNA +  
Sbjct: 167 TPESLETFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVT 226

Query: 158 PNVCSSSLGIKCHGVNKVINYGR 181
           PNVC +S  I CHG++ VI++ +
Sbjct: 227 PNVCQNS-RISCHGISDVISFNQ 248

[Close]

BLAST of Chy12G211950 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-16
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 40  SSQTSNKTDLQAAIEDMKAQSFYGFAILLQMLNITTQLTLKEITFFIPQDPQI--SNISI 99
           S    N  +L  AIE+M+  +++ F +L+ ML       L  +TF +P+D  +  SNI  
Sbjct: 27  SPHVPNNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFLANVTFLMPKDKTLSTSNIIN 86

Query: 100 AVDRLETFVLSHMILMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNNGRGHFVVNNAVVNV 159
             D +  F+L H I   L F  L   P GSIVPS   +  + I N GR ++ +NN  +  
Sbjct: 87  QQDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIIS 146

Query: 160 PNVCSSSLGIKCHGVNKVI 177
            N+CS    IKCHG++ ++
Sbjct: 147 RNICSLG-SIKCHGIDGIL 164

The following BLAST results are available for this feature:

BLAST of Chy12G211950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DH64	3.2e-08	27.61	FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii O...	[more]

BLAST of Chy12G211950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJM9	1.2e-71	90.85	FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LTE3	1.9e-59	96.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1	[more]
A0A6J1EI57	1.0e-57	79.05	FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1KFG1	1.9e-56	75.97	FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=366...	[more]
A0A5D3E4N2	8.1e-55	91.60	FAS1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Chy12G211950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648466.2	4.11e-99	97.42	FAS1 domain-containing protein SELMODRAFT_448915, partial [Cucumis sativus]	[more]
XP_008463608.1	3.92e-92	90.85	PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo]	[more]
XP_038893487.1	4.60e-90	90.20	FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida]	[more]
XP_023520235.1	2.46e-74	79.05	FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pep...	[more]
XP_022927494.1	3.49e-74	79.05	FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7...	[more]

BLAST of Chy12G211950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26730.1	4.7e-23	39.86	Fasciclin-like arabinogalactan family protein	[more]
AT5G16920.1	5.6e-16	34.53	Fasciclin-like arabinogalactan family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 31..177 e-value: 6.4E-5 score: 25.1
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 47..176
None	No IPR available	PANTHER	PTHR36069	EXPRESSED PROTEIN-RELATED	coord: 41..191
None	No IPR available	PANTHER	PTHR36069:SF3	ARABINOGALACTAN FAMILY PROTEIN, PUTATIVE-RELATED	coord: 41..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G211950.1	Chy12G211950.1	mRNA