Chy11G196540 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTAATTTAATTCAAATATTTCATCTTATAATCTATTTTTTGTTCAACATTTAGTAGTTTTCATTTTAACATATTATTACGTAATAATAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWTVTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME* Homology
BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12 Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.6e-12 Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 61.6 bits (148), Expect = 6.2e-09 Identity = 33/107 (30.84%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5X4E3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa023156mg PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31 Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5XAH1 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020713mg PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31 Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5Y3E1 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016870mg PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31 Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: A0A6A5LG56 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043715 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30 Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: A0A2Z7CML7 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_34019 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30 Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028108647.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis]) HSP 1 Score: 147 bits (371), Expect = 2.06e-41 Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. NCBI nr
Match: KZV48003.1 (hypothetical protein F511_34019 [Dorcoceras hygrometricum]) HSP 1 Score: 145 bits (365), Expect = 4.03e-41 Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028113950.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis]) HSP 1 Score: 147 bits (371), Expect = 6.17e-41 Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. NCBI nr
Match: KZV13808.1 (hypothetical protein F511_45014, partial [Dorcoceras hygrometricum]) HSP 1 Score: 145 bits (365), Expect = 1.41e-40 Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028056220.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Camellia sinensis]) HSP 1 Score: 147 bits (371), Expect = 1.57e-40 Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Chy11G196540 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 72.0 bits (175), Expect = 3.3e-13 Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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