Chy10G176040 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGAGCAGTAGAGGCAGCAAATAAAAATATCAAAAGAATTATTGAAAAGATGACTATCACGTATAAAGATTGGCATGAGATGTTACCATTTGCATTACACGGTTACCGAACGTTAGTTCGCACATCAACTGAGGCAACTCCTTTCTCTTTGGTGTATGGCGTGGAAGTTGTTTTGCCTATTGAGGTCGAGGTGCCATCCCTTAGGGTAATCAAAGAAGCAGAACTAGAAGAAGCTGAATGGACACGGGCAAG ATGAATGGAGCAGTAGAGGCAGCAAATAAAAATATCAAAAGAATTATTGAAAAGATGACTATCACGTATAAAGATTGGCATGAGATGTTACCATTTGCATTACACGGTTACCGAACGTTAGTTCGCACATCAACTGAGGCAACTCCTTTCTCTTTGGTGTATGGCGTGGAAGTTGTTTTGCCTATTGAGGTCGAGGTGCCATCCCTTAGGGTAATCAAAGAAGCAGAACTAGAAGAAGCTGAATGGACACGGGCAAG ATGAATGGAGCAGTAGAGGCAGCAAATAAAAATATCAAAAGAATTATTGAAAAGATGACTATCACGTATAAAGATTGGCATGAGATGTTACCATTTGCATTACACGGTTACCGAACGTTAGTTCGCACATCAACTGAGGCAACTCCTTTCTCTTTGGTGTATGGCGTGGAAGTTGTTTTGCCTATTGAGGTCGAGGTGCCATCCCTTAGGGTAATCAAAGAAGCAGAACTAGAAGAAGCTGAATGGACACGGGCAAG MNGAVEAANKNIKRIIEKMTITYKDWHEMLPFALHGYRTLVRTSTEATPFSLVYGVEVVLPIEVEVPSLRVIKEAELEEAEWTRAX Homology
BLAST of Chy10G176040 vs. ExPASy TrEMBL
Match: A0A5A7T1X2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.1e-34 Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Chy10G176040 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.0e-33 Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Chy10G176040 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.0e-33 Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Chy10G176040 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.0e-33 Identity = 72/84 (85.71%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Chy10G176040 vs. ExPASy TrEMBL
Match: A0A6J1D7C7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.7e-33 Identity = 71/84 (84.52%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Chy10G176040 vs. NCBI nr
Match: KAA0046906.1 (putative integrase [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 5.19e-43 Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Chy10G176040 vs. NCBI nr
Match: KAA0066098.1 (uncharacterized protein E6C27_scaffold21G00890 [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (371), Expect = 7.34e-43 Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Chy10G176040 vs. NCBI nr
Match: TYK22867.1 (putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]) HSP 1 Score: 148 bits (374), Expect = 8.97e-43 Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Chy10G176040 vs. NCBI nr
Match: KAA0036943.1 (uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 154 bits (389), Expect = 2.12e-42 Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Chy10G176040 vs. NCBI nr
Match: TYK03242.1 (putative integrase [Cucumis melo var. makuwa]) HSP 1 Score: 146 bits (368), Expect = 6.48e-42 Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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