Chy5G099160 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G099160
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	chrH05: 12806020 .. 12813356 (-)
RNA-Seq Expression	Chy5G099160
Synteny	Chy5G099160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAACACAACTACAGACAATGGCTCCACTGATGCCATTCCCAACCCTCTAAGCTCCACACTTCCCTCTTTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGACGATGATTCCGATACCGATCCTTCTAACCAAGACTACTCATCTGTTCCCCCTTCCGATTCTGCAGCTCATGAACCATCCAGTCATACCGGCCCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCGGTTGTTAAAGTGGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTCTTTCTCTAACCTCAGCGTTTTTTGGTAGTTGTTCGTTTTATAGTAGTAAAGACTTTGTTACTCATGGTTGCATAGGGACGATGAGTTGAATCTTATATTGGGGTTTTTTTGTTATGTTTGGTTCCAGTTCCATATCCGCTACATGGTTTTGTTAGAGGACTGTCTTGGTAGTTATTTATTTAGTCTTGGCATCTTTATGTGTTCCTCGATGGATGCTTAGACTGGATGTTATGATTTTTAGTTAAAAGATATCTCCTTTTTCGAGTCTCAGGGGACTTACAGGGAAAAAAGAAAAATGTAAAATTCTCCCGTCGTTGACTGATTGCGTCAGTTTCATGCTAGTTTGTCATAACAAGTTATTTCTCCCTTCTTTCACCCGAGCTGAGCCGCTGAATTGCTGTCTGATATTAGGTTAAGTAGTAGTATAGATGGAATTTTTTGGGCATGAAGTTTTGGTTGTTTAGAATTGAGGCTTGATCTACTATGGAGGAGGAGGTGCTTCTGAATTCTTCCTTTAGGGAGAAGGGGATATTGTTGTGGCATGCTCGTTCCTTTGCAATTATGTGGGGGCATTTAGCGTGAGAGGGATAATAGAATCCGTAGAGTGGTGGAGAGAAATTTGGGAGATGGCTATATTTATTGCCTCCTTGTGCGTGTCTTTCACTAAGCCTTTTTTTTCTTTCAAATAATTATGAGCTTGATTTTGTTATGTTGGATTGGAGTCCTTTTCTGTGGTTAGGATCAAACTCCTTTTTTATTGGAAGTTTTTTTTTGTTTGTGCTTATATATTTAGAAAAAAAAAAACTTGATAGTCTGTTTTTTGCTAATTTTATTTTGCAGTATATATATATATTATTCCCAGTAACTCGATGTTCTTTCAAACATGTTCTTTCAGTTTTTAATGTTTAGAGTTTACTTCAGGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCAGGAGGTATGCTTTCATTTTCTGTTCTGTGCTTGACATGCTCTTTTATTAGATTGGTTTTGAATCAAAGATCATGAATTGTTCCAGATAGCTAAATCGTAGAGCCATAAAAAAGGCTGTTATTGAGTGAAAGAAGACAAATAAGCACACCCTCCAAAACTTCATTGCAAGATATGGATTGTTTTAAAGAGTTATGATGCCCCTAATAAAGAACCAAGGGAATCAATGGAAGACCACCTTCATTATGAGTGGAAATTTAGGAAGCATCGTTGCAAGATTGAAATTTCACGATTTGTGCTGTGTTAGTGTTAGAATTTATGATTCAGTGTTTGGCCCTCTTCCAATGAATTAATTAGAGTCTCTTATTTTAGAAAAATTTGATGTTCATATTTTTGGAATAAGTACTCCGTGAAGAAAGTATCCAGCGGAATCACCATTGTCAATGGAGATTACATTTTTACCTTTTTTCCATTGTGCTAAAGGTACCTTCCCTTTTTCTATTGAGCTAAAGGACCATTCGCTTAGTTGTCGTGTTCTCTCTGTGGCCTTCCTCGTTTGTAAATAGAGTTTGAATGCCCAAAAGACTTGTTTTCATCCAAAAATGGATGTTGGCTTACTCATTTTCCTGATATCAAGGTGGCTAAGATGTGGCTTGAGGATTCTGAGGCTTAGAATTTGCATCTTCGTTGTAATTTTAATGGATACGAAAGACATGAGTGGGCTTCTTTATCTCTGTTGTTGTCCTCTGTCAGATTTTGCTTGGTGCCTGATTCATTGAGATGGATTATTTACTCCTTTTCTACATTCTTTGTGAGATCTCTCATTGAAGATTTAATGGGTTCTATTGAGCCTATTGCATGGGATTTTTATTCTGTCATTTGGCTGGATCACCACCCCAAGAAAATTAAAATTTTCTTTTGGGAGCGTAGTTAAGCTGCCATCAATAATACTGATTATCTTCAACGTCGTACACCATACATGTCTTTCTGTCCATCGTGGTGTGTTACGTTAAAGCTCATGTTAAGTCCCTTGCTCATCTGTTTATGCATTGCCCTTTTGCGTCCGTTTCTAGCATAATATTTTGGATGCTTTTGGGTGGTCAATCGCCTGCTTTAATAATATTTTCGACATCTCTCTTCTGGTGGGGCACCCCCTTTTTAATGCTAAGAAAATGGCTTGGTTGGCTATTCTTTGCACTTTCTTTTGGACTTTGTGTGGTGAGTGTAATAAGCGTCTCTTTAAGGATTCAATTTCCTCTTTTGACTCATTTTTTGATCTTGTTCTGTCTACTGCTTTTTATTGGTGCAAAATTGGGCACCCTTTTAAGAACTTTAGTATTTCTTATTTAGTTTTTCAATTGGGAATGTTTTTGTAAACACCTTTAGGTGCTGGGATCTCCTCCCTATTTGTTTATTCAATGAAATGTTTCTTATCTTAAATAAAAAAGGCACCTTCCCTTTTTTCCCATAAAAAAACCTCTTCTTTAAAAGTTATACCCCCATCTTATGGTTGTTTGGTTTGTGTAGCTAACTTAATTGGAAGTGCTTAGCTTTATTCATTAGTCCATTGAAAAGCCTTGCAGAAAAGGTATCTCTCGTGCTATTTTGACATATTTGTCTTGAAGGATTAGAGTTGATAACTAAAGAAAAGAAAAATTTGCTATTGGGTGGAGAATGGTTCCTCTCTCTCTCTCTCCCTCTCTCTCTTCAAATAAACCACTGGGTACAAGGGAGATTTGTTGAAGCCTGTTATTCTCAACGAAAATTTCTCTTAAAAATCTCCCTCTCTCTTTTCAAATAAACCACTGGATAGAAGGGAGATTTGTTGAAGCTTATTATTCTCAATGAAAAGTTCTCATAAAAAATGAGATATATATATATATATACACACATATAATTTTAAAAATAAAAGAAAATCCGAAGCCCTATTTCTTAATCTCTTAAAAAGTCTTTATTTTTTCTCAAAATTTTCACTCCCCATCATTCGGAAACTATACTTTTTGATATGGAAAAAATGTTATATATACACACAGATTTTATTGTATACTCCGGTTCTTTCTTGCCAAAAGGGCTATTACATAGTTTTTTATGCATGCTGTATATTCTTTCATTTGCTCTATGAAAGTTTATATTTCGATTAAAAAGGGAAATTATGTATCATTCGATTTGAAACACTAACATAGGGCAATATAATCCCCCAAACTGTCATCGGGTGTTCACTTCAATTGTCTAAGAGCTAAGGTTTACAATCTAAGAAACCTTGAATAGAACTGTACAGCACAATCATTCTTTATCAAATTTGTAGACTATTTTGTATGGCTCGTGCCCTTTCCTTTGAATGGGGTGCCCTTTTGAAGCCATGGTTTTTCCATTTTTGTAGTCTTTTTATTTTTTCATTTTCTTTCATTGCTTTTATATTAAAAAGAATAAGATAAAATAACACGAGTGAACAAATAGATAGCTGCTACATCAGCTACAATAGTTCAAAGGTATGGTGATAAGAGACGTATTTGCCTCAATCCCTTGGATGCAGGCATGCTGCATGCTGGTGAGTTTTAGCAAGATTTGATTCTAGAAATATGATTGCAGGTGGAATTGTAACTAAGGTTCATAAAATTCTTAGGCCTATTTTTTCTCTTCCTTGAATATGAGGTTATAGGGAGATGATGTGGGTGTTCCTTCTCAATCCACCTTTTTGAGGTATGGAGAAGTTTTTGTGGAAGGAGGGTTTGTTCTATGTTGTGGACTCGTGGGGTGTGACTTCAGAGGAATAGTAGGAGGATCTTTAGAGGGGTTGAGAGTGATCCTAGTGATGTTCAGTTCTTTGTTAGATTCTTTGTTTAATTGTTTCTCTTCGACCATGGAGACTTTTTTAAATTATTCTTTATGTTCTATTTTTACTTTATTGAAGCCCTTCCTTTTGTGGCTTGACATTCTCTCGATGATATTTCAGTTCTTTATCAATATAATTAAAATCTGGGATCCTGGACCCTTTAGCAATATGAAAAATTAATGTCTGAGACTTTTCATTCAACGAGACACCCCATTTCTAACTTTATTGTTATTGATGAGTAATATGAAAAAATTGGTAATGAGAATGTCAATCAACTCTTCATAATTGGAGAGTGTAGTCTAGTTTCATTCTTGAGTTATGAGTATTCTCAGGTCATCTTAGAGAAGCCCGTGGCAGATCCAAAAATTTTGCTAACAAGGGGCTATATAGTTTAGTAAACATAATCTGGAAAAAAATGTAAAGGGTGGAACTTGAACTTGGATCTAAAGGAGGCTGGAAAATAATTTTACCACTTGGATAGCTTCTGATATTGGTATTATTTCTGTTTTATATATATACATATATTATATAAAGAGCATAAAATTGATGAGGGCTCGAGCCCCAGGCCTATACTAAATCCGCCAGTGAGAGAAGCACACTTGTTCTGATTCACTAACATCTTTCTCTTGCTGATACATTATGAAAATGATCTAAGGGCTAAAACTAAAAGTACATGGCAATAGCTGTATACTTTAACTATATAAGTATTATCTTTTATCTCGATTCTATTGACGACTACTAACTTCAAGCCTTGAGTTCAGCCAGCAGGTCCAAGTAACTACTGATGTCCTGAGATAATAATACATTGCCTCCTATAGTCATTCGTTTACGAGTACTCTCTGAACGTTCTCTTACTCATCTACATTTGATGCTTGCAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAGTCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTTTTTGAAAAGAGTGTAAGTTCTTTGTTTGTTATGTCTATGACCAACCTTCTCAAGGACTCCTAATGAATTGCTGCTCTTCTTTTTTTATATAGTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGGCTGACAAGTCCTCACTTCTTACGGCATCTCAAAGCATAATCTCTGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGCGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTTCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTGGTATATTTAGCTCATTTATTCAATTATTGGTAGAATGAAATGGTCTATGTTGACTTAGTGAGGTAGCAAACTATCTCATCTACTGACCTCCATAATCAATAAGATCGATTCCGTCATTGCATGCCTACTTTTACAGTTCGGTGATTAGTTTTTGATCTTCAGGTCAAGGCAAGCTAGAAGCTTGTCAACTTTACATGTCCTTCGTGTCTTTGAAACACTAGGTCTAAAATGTTTGGCATATTGCATTCAATTATTATTTAGATTTTACCATAATGTTGAATGGAGGCAGTGGCCAGTGGGAAAAGAGTAGTTACAGAGTTTGTCTTTGTAGTTTGCTATTTCTGATCAAGTTACCTCTTTGTGGCTTCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCCTATGCTGAAGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAATTCAGGTAATGAATTATACAACTTAGTGGTCAAGAGCTTGAAAAAAAAGCAGCCAATATATTATGTTATAAGCTTGATATAGTTGTATCACAATGTTGTATTACTTAAAATATATTATGCTCTTATGTTTTGATTTCAACATAAATGAATTGAATGCATAACATGAGCGAGTGTATTTATCAAAATTTTAATCGTTTTACAGTGTAATTCCATGTTTTCATATTTCAAACTTGAAAGTTAAAAACATTGATTCCGTAGAAATGTTTTCATTATTTTCACTTAGAGAACAAAATCCAAACATAGCCCTTATAATTGGATTATAATAGTTTGTGTTTGGACGGTAGATTATTTTGGTTTGGATTATAATAGTATGTGTTTGAGATGTAAGCTAATTTTAGTTTTGAGACGAAAGCAAATAATAAAAAGTTGATGTATGTAAAATAGTAAAAACTGTAGCAAATGAGAGTTGTCAACTAGTATTGATTGTAGTTAATTGGGGACTACAAAATAGTATTTACTGTAGCAAACAAGTGATTAGTATAGTCTTAAATTGTCCTTGTTCCAAACTTTTAGGGTTGTAAACTATTTTGTTTGTAATATATGGAGGGTTTGTGCGTGAGATCCTAGGGCAATACAGACAAGATGTCATAAGACATTTTTTTCCCTCTTCTTTTCTATCTCTATTTAGGCTCAAATACCTATTTTAAGGTAGAAAAAGATTGTGATTCTGATTCCCGCGTGAAGAACAATATCTCAACTTTAAATATGTATCTGTTGATTAGCAAAATTTAGGCTAATGTTTACATATTTATAATTCTTTTTTTTTTTCACCCATTTAGGAAGCAGTGAATGCACCCAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTGGACACAACAGGATTGAGGTCATCTTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACACTACCTTCAGGCTCTGA

mRNA sequence

ATGGCCACCAACACAACTACAGACAATGGCTCCACTGATGCCATTCCCAACCCTCTAAGCTCCACACTTCCCTCTTTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGACGATGATTCCGATACCGATCCTTCTAACCAAGACTACTCATCTGTTCCCCCTTCCGATTCTGCAGCTCATGAACCATCCAGTCATACCGGCCCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCGGTTGTTAAAGTGGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAGTCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTTTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGGCTGACAAGTCCTCACTTCTTACGGCATCTCAAAGCATAATCTCTGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGCGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTTCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCCTATGCTGAAGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAATTCAGGAAGCAGTGAATGCACCCAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTGGACACAACAGGATTGAGGTCATCTTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACACTACCTTCAGGCTCTGA

Coding sequence (CDS)

ATGGCCACCAACACAACTACAGACAATGGCTCCACTGATGCCATTCCCAACCCTCTAAGCTCCACACTTCCCTCTTTAGCTGCTGCAGAACCGGACTCTACAGAAGCCGGTGACGATGATTCCGATACCGATCCTTCTAACCAAGACTACTCATCTGTTCCCCCTTCCGATTCTGCAGCTCATGAACCATCCAGTCATACCGGCCCTTCCGATAAAAAGTGGCCCGGATGGCCCGGCGACTGCGTCTTCCGCCTTATTGTGCCGGTTGTTAAAGTGGGCAGCATTATTGGGCGCAAGGGGGATCTTATCAAGAAGATGTGTGAAGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGTTGATATCAGGAAAAGAAGAGCTTGAGTCACCCCTTTCCCCTGCTATGGACGCAGTTATAAGAGTCTTCAAACGTGTGTCTGGATTGTCTGAGAATGAAGATGAAGCTAAAGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAACAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGGGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAGTCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTAGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTTTTTGAAAAGAGTTTTAATACACCTGCCTCACAAGATCGCCAAACGGAAACCTGGGCTGACAAGTCCTCACTTCTTACGGCATCTCAAAGCATAATCTCTGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGATCGCGAAACTCATCTTGATTCTCATATTTCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTTCTTCCTACTATTCGATCATCAGGTGTTGGCCGGTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCCTATGCTGAAGATATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATCCAAGAGAGCAGGGGATTACCCGATGAGATAACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAGCAATTAATTCAGGAAGCAGTGAATGCACCCAAGGAACCAGTAACAAGCAGCAGCTATGGAAGGCTGGACACAACAGGATTGAGGTCATCTTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACACTACCTTCAGGCTCTGA

Protein sequence

MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAAHEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL*

Homology

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BLAST of Chy5G099160 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.6e-120
Identity = 267/498 (53.61%), Postives = 339/498 (68.07%), Query Frame = 0


Query: 13  DAIPNPLSSTLPSLAAAEPDSTEAG---DDDSDTDPS-NQDYSSVPPSDSAAHEPSSHTG 72
           D++ N  S  LP      P    A    D++S   P  NQ     P S +AA      T 
Sbjct: 6   DSVENNGSINLPENENLIPAGFSAAALLDENSGAFPELNQ-----PDSLAAAETTFPDTN 65

Query: 73  PS-DKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 132
            S +++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+
Sbjct: 66  DSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRI 125

Query: 133 VLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDE----AKASFCSIRLLVASTQAINL 192
           VLISGKEE E+ +SPAMDAV+RVF+RVSGL +N+D+    A + F S+RLLVASTQAINL
Sbjct: 126 VLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINL 185

Query: 193 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 252
           IGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+
Sbjct: 186 IGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRR 245

Query: 253 FLVDHSVLPLFEKSFNTPASQDRQTETWAD-KSSLLTASQSIISAEYPPSTKRESLFLDR 312
           FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R
Sbjct: 246 FLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLER 305

Query: 313 ETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGG 372
           ++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+QTMQIP SYAEDIIGV G
Sbjct: 306 DSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEG 365

Query: 373 TNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT-SSS 432
            NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV+ S  
Sbjct: 366 ANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVSVSGG 425

Query: 433 YGRLDTTGL---------------------------RSSYSQLAASGSSYTSSSLSSQSY 471
           Y R+D+  +                            ++YSQL   G S  + +L+ Q+Y
Sbjct: 426 YARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQL--GGPSTYTPTLTGQTY 485

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BLAST of Chy5G099160 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-73
Identity = 178/430 (41.40%), Postives = 246/430 (57.21%), Query Frame = 0


Query: 62  EPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAV 121
           E  +  G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  
Sbjct: 168 EEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPP 227

Query: 122 GTPDRVVLISGKEELESPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQ 181
           GT +R V++SGKEE ES L P+MD ++RV  R V GL     +A   S  S RLLV ++Q
Sbjct: 228 GTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQ 287

Query: 182 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 241
           A +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  
Sbjct: 288 AGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIAS 347

Query: 242 HLRKFLVDHSVLPLFEKSFNTPASQ----DRQTETWADKSSLLTA--------------- 301
           HLRKFLVD S++P FE     P  Q        ++W        +               
Sbjct: 348 HLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQ 407

Query: 302 SQSIISAEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIV 361
                 + YPP   R+   ++++ H        GIS YG++  +    +  V  +   + 
Sbjct: 408 PPPRHDSYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVA 467

Query: 362 TQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ 421
            QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ
Sbjct: 468 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 527

Query: 422 MAQQLIQE-----AVNAPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYG 466
            A QLIQ         AP +P T +          +  Y+  A  GS Y ++  +    G
Sbjct: 528 TAVQLIQNFMAEAGAPAPAQPQTVAPE--------QQGYNPYATHGSVYAAAPTNPP--G 575

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BLAST of Chy5G099160 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 105/366 (28.69%), Postives = 162/366 (44.26%), Query Frame = 0


Query: 60  AHEPSSHTG---PSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 119
           +H P  H G    S     G       RL++   +VGSIIG+KG+ +KKM EE+ ARI +
Sbjct: 22  SHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81

Query: 120 LDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSE--------NEDEAKASF 179
            +G    P+R+V I+G            DA+ + F  ++   E        N        
Sbjct: 82  SEG--NCPERIVTITG----------PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP 141

Query: 180 CSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESL 239
            ++RL+V ++Q  +LIGK GS IK I+ESTGA V+V +GD +P    + ER V + G   
Sbjct: 142 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPD 201

Query: 240 KVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA------SQDRQTETWADKSSLLTASQ 299
            +++ ++ +   + +     + +P   K  +TP       +   Q +        LT   
Sbjct: 202 AIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLH 261

Query: 300 SIISAE--YPPSTKRESLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIV 359
            +   +  +PP  +    F   +  L  H S    +L GQ        SSG+  S     
Sbjct: 262 QLAMQQTPFPPLGQTNPAFPGEK--LPLHSSEEAQNLMGQ--------SSGLDAS----P 321

Query: 360 TQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ 407
              T  + IP      IIG  GT I  IR+ SGA + I  +     E  + I GT + + 
Sbjct: 322 PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANIS 357

[Close]

BLAST of Chy5G099160 vs. ExPASy Swiss-Prot
Match: P91277 (Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.4e-18
Identity = 99/355 (27.89%), Postives = 154/355 (43.38%), Query Frame = 0


Query: 84  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPA 143
           RL+V     G+IIG+ G+ IK++  E  A ++V D    TP+RV  ++  E+        
Sbjct: 53  RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTVTADEK-------- 112

Query: 144 MDAVIRVFKRVSGLSENEDE-AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
              V+ + K V  L   ED  ++   C +R+LV  + A  LIG+ GS IK ++E   A +
Sbjct: 113 --TVLNILKDV--LPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 172

Query: 204 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA 263
           ++ +G       G+ +R++   GE   VL  +E V+  L++  +  S  P +  +FN   
Sbjct: 173 KIFTG----CAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATP-YLPAFNYDP 232

Query: 264 SQ-------DRQTETWADKSSLLTASQSIISAEYPPSTKRE------------------- 323
           S                  ++   A Q     + PP   R                    
Sbjct: 233 SNISDYGGFPGNMPAGGPPNNRGPAPQR--GGQGPPGGPRSYGGAITQGGGQRSFEAGDF 292

Query: 324 SLFLDRETHLDSH-ISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAE 383
             F      +  + +S+ G          P     G G  GG  VT  T  + IP     
Sbjct: 293 QQFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVT--TAQVTIPSDLGG 352

Query: 384 DIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 411
            IIG GG  IA IR+ SGA +T+++S G P+ I + IKGT  Q+  AQ L+Q+ V
Sbjct: 353 TIIGRGGERIARIRQESGAQITLEQSNGQPERI-ITIKGTEQQIHSAQYLLQQCV 383

[Close]

BLAST of Chy5G099160 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 109/389 (28.02%), Postives = 172/389 (44.22%), Query Frame = 0


Query: 37  GDDDSDTDPSNQDYSSVPPSDSAAHEPSSHTG---PSDKKWPGWPGDCVFRLIVPVVKVG 96
           G+ D+   PS   +S++    + +H P    G    S     G       RL++   +VG
Sbjct: 2   GEGDAFWAPSVLPHSTL---STLSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVG 61

Query: 97  SIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR 156
           SIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G            DA+ + F  
Sbjct: 62  SIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------PTDAIFKAFAM 121

Query: 157 VSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 216
           ++   E        N         ++RL+V ++Q  +LIGK GS IK I+ESTGA V+V 
Sbjct: 122 IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV- 181

Query: 217 SGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA--- 276
           +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  +TP    
Sbjct: 182 AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFA 241

Query: 277 ---SQDRQTETWADKSSLLTASQSIISAE--YPPSTKRESLFLDRETHLDSHISSSGISL 336
              +   Q +        LT    +   +  +PP  +    F   +  L  H S    +L
Sbjct: 242 GGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEK--LPLHSSEEAQNL 301

Query: 337 YGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 396
            GQ        SSG+  S        T  + IP      IIG  GT I  IR+ SGA + 
Sbjct: 302 MGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 357

Query: 397 IQESRGLPDEITVEIKGTSSQVQMAQQLI 407
           I  +     E  + I GT + + +AQ LI
Sbjct: 362 IANATEGSSERQITITGTPANISLAQYLI 357

[Close]

BLAST of Chy5G099160 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 4.3e-251
Identity = 463/470 (98.51%), Postives = 467/470 (99.36%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTT+NGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSD+DPSNQDYSSVPPSDSAA
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 471
           SYGRLDTTGLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Chy5G099160 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 2.6e-248
Identity = 461/470 (98.09%), Postives = 463/470 (98.51%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTTDNGSTDAI NP SSTLPSLAAAE DSTE GDDDSD DPSNQDYSS+PPSDSAA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSSHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 471
           SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Chy5G099160 vs. ExPASy TrEMBL
Match: A0A1S4E0X0 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC103492560 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.8e-242
Identity = 454/474 (95.78%), Postives = 458/474 (96.62%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTTDNGSTDAI NP SSTLPSLAAAE DSTE GDDDSD DPSNQDYSS+PPSDSAA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSSHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAED 360
           DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAED
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420

Query: 421 VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 471
           VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of Chy5G099160 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 5.5e-222
Identity = 415/470 (88.30%), Postives = 433/470 (92.13%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTT+NGSTDA     S+ L   AA EPDSTEA   +S  DPSNQDY S P SDS  
Sbjct: 1   MATNTTTENGSTDADALNSSAQLAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASDSLP 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HE  +H G SDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRVLDGA
Sbjct: 61  HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEE E+P SPAMDAV+RVFKRVSG SENEDEAKASFCS+RLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE VVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQT++WADKSSLL+ASQS+IS EYPPS+KRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRETHLDSHISSSGISLYG DRVLP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA++ PKEPVTSS
Sbjct: 361 GGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 471
           SYGRLDTTGLRSSYSQL ASGSSYT SSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of Chy5G099160 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.4e-220
Identity = 420/474 (88.61%), Postives = 437/474 (92.19%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIP---NPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSD 60
           MATNT TDNGSTDA     NP SS L S+AAAEPDS EAG  +SD DPSNQDY S P SD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SAAHEPS-SHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H+ S +HT  SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ E+PLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQS+ISAEYP STKRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+I SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420

Query: 421 VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 471
           VTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGY+TFRL
Sbjct: 421 VTSSSYGRLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of Chy5G099160 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 879 bits (2270), Expect = 0.0
Identity = 463/470 (98.51%), Postives = 467/470 (99.36%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTT+NGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSD+DPSNQDYSSVPPSDSAA
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470
           SYGRLDTTGLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Chy5G099160 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 869 bits (2246), Expect = 0.0
Identity = 461/470 (98.09%), Postives = 463/470 (98.51%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTTDNGSTDAI NP SSTLPSLAAAE DSTE GDDDSD DPSNQDYSS+PPSDSAA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSSHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470
           SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Chy5G099160 vs. NCBI nr
Match: XP_016901887.1 (PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo])

HSP 1 Score: 849 bits (2194), Expect = 3.62e-309
Identity = 454/474 (95.78%), Postives = 458/474 (96.62%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTTDNGSTDAI NP SSTLPSLAAAE DSTE GDDDSD DPSNQDYSS+PPSDSAA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPSSHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEEL+SPLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGP----IVTQVTQTMQIPLSYAED 360
           DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAED
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420

Query: 421 VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470
           VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL
Sbjct: 421 VTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of Chy5G099160 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 828 bits (2139), Expect = 8.33e-301
Identity = 443/473 (93.66%), Postives = 453/473 (95.77%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIP---NPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSD 60
           MAT TTT+NGSTDA     NP SSTL SLAAAEPDSTEAG  +SD DPSN+DY SVP SD
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SAAHEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAA+E  +HTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTPASQDRQ +TWADKSSLLTASQSIIS EYPPSTKRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 LFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360
           LFLDRETHLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPV 420
           IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV
Sbjct: 361 IGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 420

Query: 421 TSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470
           TSSSYGRLD TGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 TSSSYGRLDATGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 473

[Close]

BLAST of Chy5G099160 vs. NCBI nr
Match: XP_031736379.1 (RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus])

HSP 1 Score: 826 bits (2134), Expect = 1.49e-300
Identity = 434/440 (98.64%), Postives = 437/440 (99.32%), Query Frame = 0


Query: 1   MATNTTTDNGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDTDPSNQDYSSVPPSDSAA 60
           MATNTTT+NGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSD+DPSNQDYSSVPPSDSAA
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60

Query: 61  HEPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
           HEPS+HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 61  HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120

Query: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
           VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180

Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
           INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240

Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
           LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEY PSTKRESLFL
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300

Query: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
           DRE H DSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360

Query: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420

Query: 421 SYGRLDTTGLRSSYSQLAAS 440
           SYGRLDTTGLRSSYSQLAAS
Sbjct: 421 SYGRLDTTGLRSSYSQLAAS 440

[Close]

BLAST of Chy5G099160 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-121
Identity = 267/498 (53.61%), Postives = 339/498 (68.07%), Query Frame = 0


Query: 13  DAIPNPLSSTLPSLAAAEPDSTEAG---DDDSDTDPS-NQDYSSVPPSDSAAHEPSSHTG 72
           D++ N  S  LP      P    A    D++S   P  NQ     P S +AA      T 
Sbjct: 6   DSVENNGSINLPENENLIPAGFSAAALLDENSGAFPELNQ-----PDSLAAAETTFPDTN 65

Query: 73  PS-DKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 132
            S +++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEETRARI+VLDG V TPDR+
Sbjct: 66  DSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRI 125

Query: 133 VLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDE----AKASFCSIRLLVASTQAINL 192
           VLISGKEE E+ +SPAMDAV+RVF+RVSGL +N+D+    A + F S+RLLVASTQAINL
Sbjct: 126 VLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINL 185

Query: 193 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 252
           IGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQGE+LK+LKALE +VGHLR+
Sbjct: 186 IGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRR 245

Query: 253 FLVDHSVLPLFEKSFNTPASQDRQTETWAD-KSSLLTASQSIISAEYPPSTKRESLFLDR 312
           FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R
Sbjct: 246 FLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLER 305

Query: 313 ETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGG 372
           ++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+QTMQIP SYAEDIIGV G
Sbjct: 306 DSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEG 365

Query: 373 TNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT-SSS 432
            NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV+ S  
Sbjct: 366 ANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVSVSGG 425

Query: 433 YGRLDTTGL---------------------------RSSYSQLAASGSSYTSSSLSSQSY 471
           Y R+D+  +                            ++YSQL   G S  + +L+ Q+Y
Sbjct: 426 YARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQL--GGPSTYTPTLTGQTY 485

[Close]

BLAST of Chy5G099160 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 278.1 bits (710), Expect = 1.3e-74
Identity = 178/430 (41.40%), Postives = 246/430 (57.21%), Query Frame = 0


Query: 62  EPSSHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAV 121
           E  +  G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  
Sbjct: 168 EEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPP 227

Query: 122 GTPDRVVLISGKEELESPLSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQ 181
           GT +R V++SGKEE ES L P+MD ++RV  R V GL     +A   S  S RLLV ++Q
Sbjct: 228 GTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQ 287

Query: 182 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 241
           A +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ GE   V +ALE +  
Sbjct: 288 AGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIAS 347

Query: 242 HLRKFLVDHSVLPLFEKSFNTPASQ----DRQTETWADKSSLLTA--------------- 301
           HLRKFLVD S++P FE     P  Q        ++W        +               
Sbjct: 348 HLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQ 407

Query: 302 SQSIISAEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIV 361
                 + YPP   R+   ++++ H        GIS YG++  +    +  V  +   + 
Sbjct: 408 PPPRHDSYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVA 467

Query: 362 TQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQ 421
            QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ
Sbjct: 468 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 527

Query: 422 MAQQLIQE-----AVNAPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYG 466
            A QLIQ         AP +P T +          +  Y+  A  GS Y ++  +    G
Sbjct: 528 TAVQLIQNFMAEAGAPAPAQPQTVAPE--------QQGYNPYATHGSVYAAAPTNPP--G 575

[Close]

BLAST of Chy5G099160 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-23
Identity = 93/343 (27.11%), Postives = 152/343 (44.31%), Query Frame = 0


Query: 80  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESP 139
           +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E LE  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 140 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 199
            S A D V+RV  R+  +      A  +    RLLV S     L+GK G LI  ++ +TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 200 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------L 259
           AS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 260 PLFEKSFNTPASQ--DRQTETWADKSSLLTASQSIISAEYPPSTKRESLFLDRETHLDSH 319
           P F   +  P      RQ     D+               P   +      DR     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 320 ISSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 379
               GI  +    V P       +R+  +G S  P++T     + IP +Y   + G   +
Sbjct: 515 TPQPGIDGHPGGMVPPDVNHGFALRNEPIG-SENPVMTSANVEIVIPQAYLGHVYGENCS 574

Query: 380 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 407
           N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Sbjct: 575 NLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

[Close]

BLAST of Chy5G099160 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.9e-20
Identity = 92/330 (27.88%), Postives = 156/330 (47.27%), Query Frame = 0


Query: 84  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVG-TPDRVVLISGKEELESPLSP 143
           ++I    K+G +IG+ G  IK + + + + I V D       D V+ ++  E  +   S 
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379

Query: 144 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
           A++AV+ + ++++   E+ED+ K     ++LLV+S     +IGK GS+I  I++ T A +
Sbjct: 380 AVEAVLLLQEKIN--DEDEDKVK-----MQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 439

Query: 204 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPA 263
            +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR    D  +      S N P 
Sbjct: 440 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR----DDVLRDRETGSRNQPP 499

Query: 264 SQDRQTETWADKSSL--LTASQSIISAEYPPSTKRESLFLDRETHLDSHISSSGISLYGQ 323
           ++      ++  SS   L   QS +S+    ++   +   +  + +    SS GI  YG 
Sbjct: 500 ARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGS 559

Query: 324 DRVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 383
             V  T   S    S    G +    T  ++IP +    ++G GG N+  IRR SGA++ 
Sbjct: 560 FPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIE 619

Query: 384 IQESRGLPDEITVEIKGTSSQVQMAQQLIQ 408
           I +S+         I GTS Q + A+ L Q
Sbjct: 620 ISDSKNSHGGRVALISGTSEQKRTAENLFQ 638

[Close]

BLAST of Chy5G099160 vs. TAIR 10
Match: AT5G64390.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-18
Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 79  GDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI-------- 138
           G   FRL+ P+  VG++IG+ G++IK++ + T A+IRV +   G+PDRV+ I        
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 139 -------------SGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 198
                          K+E E  +S A  A+I+VF+ ++       EA +     RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAA------EADSDTVVCRLLTES 164

Query: 199 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 238
           + A  +IGK G ++ SI++ TG  + +   + +P  A  D+ MVE++G ++ V KAL  +
Sbjct: 165 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217

The following BLAST results are available for this feature:

BLAST of Chy5G099160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	2.6e-120	53.61	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	1.8e-73	41.40	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
P57722	2.0e-19	28.69	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]
P91277	6.4e-18	27.89	Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6...	[more]
P57721	1.4e-17	28.02	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]

BLAST of Chy5G099160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMH4	4.3e-251	98.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A5D3BVI2	2.6e-248	98.09	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4E0X0	2.8e-242	95.78	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FC72	5.5e-222	88.30	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K7W7	1.4e-220	88.61	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Chy5G099160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149510.2	0.0	98.51	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
TYK03085.1	0.0	98.09	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_016901887.1	3.62e-309	95.78	PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis melo]	[more]
XP_038890982.1	8.33e-301	93.66	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
XP_031736379.1	1.49e-300	98.64	RNA-binding KH domain-containing protein PEPPER isoform X2 [Cucumis sativus]	[more]

BLAST of Chy5G099160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.9e-121	53.61	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	1.3e-74	41.40	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	3.1e-23	27.11	RNA-binding KH domain-containing protein	[more]
AT5G46190.1	1.9e-20	27.88	RNA-binding KH domain-containing protein	[more]
AT5G64390.2	1.7e-18	32.22	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 341..411 e-value: 4.6E-11 score: 52.8 coord: 79..152 e-value: 5.9E-9 score: 45.8 coord: 167..242 e-value: 8.0E-9 score: 45.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 334..413 e-value: 2.3E-14 score: 54.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 338..412
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 165..248
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 74..135
None	No IPR available	GENE3D	3.30.310.210		coord: 80..244 e-value: 1.2E-29 score: 105.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 70..456
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 70..456
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 80..147 score: 13.963161
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 168..237 score: 13.439081
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 342..406 score: 14.361462
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 170..235 e-value: 3.33024E-16 score: 70.9683
None	No IPR available	CDD	cd00105	KH-I	coord: 344..407 e-value: 1.05554E-11 score: 57.9551
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 82..151 e-value: 1.857E-19 score: 80.2131
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 171..235 e-value: 3.1E-10 score: 39.7 coord: 344..408 e-value: 1.5E-11 score: 43.9 coord: 83..135 e-value: 6.1E-11 score: 42.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G099160.1	Chy5G099160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding