Chy2G031860 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCACCACAGGTGTGTGTGTGTTTTTTTAGTGGGGTTTTCACTAATTTTAAAAAAGAAAAATAGAGTAACAAAGATAAGAGTATTTAAAAAGAACAGCTAGTTAAAAAAGTGTCTAAAATTATAAATCATAAAGAGGGAATTTAGTCAGGGAGTCTGTAAAGTGTATGTTTATTGGAGGGAAAAAGTGTCAAAAGATTGAATAATTTTCAAACATTTTATGAAAAAAAAACTAATTTAATATTAAATCTAAAGTACTTTTCAGCATGTTCAGTTCCCAAAACTATTACTAACTTTTCCAATATATTAAAATTGAAACCATTTTGATACTGTTTTTTTTTCACCTAACACCGAATTTAAAATAAAATAAATTAAATTAAATTAAAAAAAAAAAACAAAAAAAAAACTGTCGTCTTTCACACACTTCTACATTATTGTAATAAGACATAAATAGATAAATACCCTTTAACTATTTTAAAGCGCAAAGAAAAATCAATTTATTCTTTAAATTTTTGGATTTGTAATTAGGGACTTATAAAGCATACCCCCAAATGTATGTGACTTGGAAATAATACATGGGGTTCACTGCCTTAATCTTGGATTCAAAGATCAATTGGTTGGGGAATGGGGAATGAGGATGGGCCAAAAGTTAATCTCAATAAAGCAAGTAGAACAAAGATATATATATATATACACACACACACACAAGGCCCACTAGTGAGAGTAGGGTATTATCAAACTCATGGGCCACTTTGCTTTAGCATATTTAGTTTTGTTGTGACAACAATAATTACAATCAGAATATTGTTGTAACATTAGTCTTGATGCATCATTGGTCAATCTCGATGTCCATTATTATTCTTGCTAAAATGTTCATAGTTTAATCGAGATAAGACATAAAGTCTTACTAAACAATTAGAGAGGTTCAAATTCCATCACTTTTTTATGGTAGTACTAAAAAATATATATACTATTCTTTACCTACTAAAATGTATATGAAACTTAATTTTCACTCGAATGAATGAAAATTTTATAAAATATTTAAGTGGCATGTTTAGATTGCCAAAAACAAAATTTTCTTTTAAAAATTTTCTTTTTATATATTTAATTTTTTAAGAAAATAAAAATGCTTAAAATAAATCTTCAAAGTGTTTTAGAAACTATCTCTGTAGCTGTAAAAACTTCAAAAAAATTTTTTCCTAAAATGACCTATTGTGAAATAAACACTTGAATAATTAAATCACTCATATTTATTTTTGTAATACATATAATTTCAATTCTTCCCCTATATGAAATTTCGGCTACAACCATGGAATCACGAGCAATATTTGGGTGCAAACTTCCCATGCCTCCCTTCCTCTACTTACACAAAAATTAATAATAAATAATTTATTCCCAAACATTTTTATTGTAAAGAATTTTAATTAAGTGCAATAGAGGTTGCACTGTAAAGCTACACCTAGTTTTACCGATCACATAATTGGCTACTTTTGAAGAAATATTAGGACCTTGAACTAATATAACTATATATAAATTACTAAAGAGCTAGCATCATGTCGCTTTTCTTTTAACATTCTTCATTGAAATAGTTAAATAGTTAAAGTTCTCGATTTTATTCAAAATGACTAGGTAACGTTTTATAAGTGTTCGATAATTTTTTATAACTTAGTTTATATTACTTTAGTTGTTAATTTTAACAATTTTAATGTTGCTATAAGAAAAGTTTGAAATCATATATGAAAATTGAACAATTTGTTGGAGAGTTCTCTCTCAACCTTAGTGATCTAAACTTCATATATAATTGATTGTAGAATTGAACTAAACCTCAAACATATTAATTACATCACAAGACATCTAAAGTACCAAATTCTTTAATTAATTTCGAGTGGACTTGTTTGCATTGTGTCTCATGGTATTATTCAAATTCACACACATTACTATTAATAATCTTCCTTCACTGACACATTCTTTCAGACTAACAATAATCAAAACTTTAATATGTACAAATATTGAAAATCTATGTTGAAAATATTAAAGAACTTCAAATCTGTATAAGGTGAAAGAGTTTAAATATAAAAGACCTAATCCTATAATGATCAATAATAATTAGTAGTATTTAACCTGTATGATTCCCAAATTATCATATGTATTAAATGAAAAATCCTCTCTTTTGTGAGAATTCAAAAGTCAAAGTTTAGATCTTTCAATTCAATAAACCCCATTAGCAATTCTAATTGGGAGCCTAAAAAGGGACCCCCACTGCTTTGGTGGGCTGACAATAACCCGTAATAACCTTCAACTCTCCACCTATAAATAACCCTTTAGTTTATGCTGCTTTTGCATATACTCTCTCTTAACCCATTCTGAGATTTCATCTATTACACATAACTTAGCCTTACGTTCAAATCTATGGCCCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTGTAGATCCTGCATTCAGCAGGCCTCTGACAACCCACACAAATCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAATTCCATGGTCAAACTGTGCATGAAGGAAAAACCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGATTCCAGGCCGGAAGACGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA ATGTGCACCACAGATCCTGCATTCAGCAGGCCTCTGACAACCCACACAAATCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAATTCCATGGTCAAACTGTGCATGAAGGAAAAACCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGATTCCAGGCCGGAAGACGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA ATGTGCACCACAGATCCTGCATTCAGCAGGCCTCTGACAACCCACACAAATCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAATTCCATGGTCAAACTGTGCATGAAGGAAAAACCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGATTCCAGGCCGGAAGACGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA MCTTDPAFSRPLTTHTNHQQLSDTLPKNPHFQFHGQTVHEGKTSNDDAVSTPNPNPPSAAASSIPGRKTDDFRPTTPGHSPGVGHSIEN* Homology
BLAST of Chy2G031860 vs. ExPASy Swiss-Prot
Match: Q058G9 (Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-05 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.7e-05 Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy Swiss-Prot
Match: O80460 (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04 Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy TrEMBL
Match: A0A0A0KLC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.2e-38 Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy TrEMBL
Match: A0A5D3CLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004910 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy TrEMBL
Match: A0A059AMU0 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00950 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy TrEMBL
Match: A0A4D6LRW0 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.8e-05 Identity = 29/44 (65.91%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of Chy2G031860 vs. ExPASy TrEMBL
Match: A0A2N9HI50 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39764 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.6e-05 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Chy2G031860 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_002724 [Cucumis sativus]) HSP 1 Score: 167 bits (424), Expect = 8.75e-52 Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Chy2G031860 vs. NCBI nr
Match: TYK12897.1 (hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (405), Expect = 6.10e-49 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Chy2G031860 vs. NCBI nr
Match: KAG7027066.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110 bits (274), Expect = 4.96e-29 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Chy2G031860 vs. NCBI nr
Match: KAG6595043.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110 bits (274), Expect = 4.96e-29 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Chy2G031860 vs. NCBI nr
Match: KAG7034348.1 (hypothetical protein SDJN02_04075, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 97.4 bits (241), Expect = 2.88e-24 Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of Chy2G031860 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Chy2G031860 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of Chy2G031860 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.7e-05 Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Chy2G031860 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 7.9e-05 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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