Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA mRNA sequence
ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA Coding sequence (CDS)
ATGTTCGTTGGTGGTGTCCTAATGGCCGACGCCGGGGCTTGGAACGGACTCTACAAGGTGGCGGGCAGTGAGGTTGTGGTCGAGAAGCAGAGCATGAACTTTCTTGCTGGGAGAGGAAGCGGGGACGGTGCCCTTGGGAAGGGCGGCGAGAAAGAGGGTGTTCGGCGACGCCATGGTTGGGAGGAATCTGGCGGCGCGTGA Protein sequence
MFVGGVLMADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHGWEESGGA
Homology
BLAST of Bhi07G000176 vs. ExPASy TrEMBL
Match:
A0A5A7UEL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008360 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 54/62 (87.10%), Postives = 54/62 (87.10%), Query Frame = 0
Query: 5 GVLMADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHGWEESG 64 G LMADAGAWN L KVA SEVVVEK MNFLAGRGSGDGALGKGGEKEGVRRRHG ESG Sbjct: 18 GALMADAGAWNRLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHGRYESG 77 Query: 65 GA 67 GA Sbjct: 78 GA 79
BLAST of Bhi07G000176 vs. ExPASy TrEMBL
Match:
A0A0A0KIB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16
Identity = 48/52 (92.31%), Postives = 48/52 (92.31%), Query Frame = 0
Query: 8 MADAGAWNGLYKVAGSEVVVEKQSMNFLAGRGSGDGALGKGGEKEGVRRRHG 60 MADAGAWNGL KVA SEVVVEK MNFLAGRGSGDGALGKGGEKEGVRRRHG Sbjct: 1 MADAGAWNGLDKVASSEVVVEKHGMNFLAGRGSGDGALGKGGEKEGVRRRHG 52
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7UEL8 1.6e-18 87.10 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KIB1 1.5e-16 92.31 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519740 PE=4 SV=1 [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G T T C G T T G G T G G T G T C C T A A T G G C C G A C G C C G G G G C T T G G A A C G G A C T C T A C A A G G T G G C G G G C A G T G A G G T T G T G G T C G A G A A G C A G A G C A T G A A C T T T C T T G C T G G G A G A G G A A G C G G G G A C G G T G C C C T T G G G A A G G G C G G C G A G A A A G A G G G T G T T C G G C G A C G C C A T G G T T G G G A G G A A T C T G G C G G C G C G T G A 20 40 60 80 100 120 140 160 180 200 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 39..66
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 48..66
Relationships
The following mRNA feature(s) are a part of this gene: