Bhi06G001581 (gene) Wax gourd (B227) v1

Overview
NameBhi06G001581
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr6: 52039047 .. 52039661 (-)
RNA-Seq ExpressionBhi06G001581
SyntenyBhi06G001581
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCGTGATTCTTCCGCCGCAGGACTGCCTTGGTAAAGGCTTTCGCCACCAAGGTCTGGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAGTAGTACTAGTTCTTCTACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTCAAGGCTAACCGTCAAGTCAATAGAGGTCGGAGCCGGGCGGAAGAGCCGTCTACGTTGGCGAAGATTTCATCGAAGAATTTGATTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGACTTTGACTCCCGATCAAGGAGTTGGTGATGGTAATGATTCTTGTGGTAAGAGGAGATTGGAATCGAAGGGTGATGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCAGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGTACTGCAACAAGCGATCTTCGGCGGCTACTGCGACTTGATCTAGGCTGA

mRNA sequence

ATGGCAACCGTGATTCTTCCGCCGCAGGACTGCCTTGGTAAAGGCTTTCGCCACCAAGGTCTGGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAGTAGTACTAGTTCTTCTACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTCAAGGCTAACCGTCAAGTCAATAGAGGTCGGAGCCGGGCGGAAGAGCCGTCTACGTTGGCGAAGATTTCATCGAAGAATTTGATTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGACTTTGACTCCCGATCAAGGAGTTGGTGATGGTAATGATTCTTGTGGTAAGAGGAGATTGGAATCGAAGGGTGATGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCAGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGTACTGCAACAAGCGATCTTCGGCGGCTACTGCGACTTGATCTAGGCTGA

Coding sequence (CDS)

ATGGCAACCGTGATTCTTCCGCCGCAGGACTGCCTTGGTAAAGGCTTTCGCCACCAAGGTCTGGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAGTAGTACTAGTTCTTCTACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTCAAGGCTAACCGTCAAGTCAATAGAGGTCGGAGCCGGGCGGAAGAGCCGTCTACGTTGGCGAAGATTTCATCGAAGAATTTGATTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGACTTTGACTCCCGATCAAGGAGTTGGTGATGGTAATGATTCTTGTGGTAAGAGGAGATTGGAATCGAAGGGTGATGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCAGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGTACTGCAACAAGCGATCTTCGGCGGCTACTGCGACTTGATCTAGGCTGA

Protein sequence

MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRRRRSAAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVGDGNDSCGKRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGKNGTATSDLRRLLRLDLG
Homology
BLAST of Bhi06G001581 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 69/212 (32.55%), Postives = 94/212 (44.34%), Query Frame = 0

Query: 1   MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRR--- 60
           M   +L PQDCL   F H           +++ NPS+  +      +++ T  S  R   
Sbjct: 1   MGVAVLNPQDCLKDPFSHM----------KQHRNPSACPNRQKKTVSNNRTRRSPPRSQS 60

Query: 61  RRSAAVGVKANRQVNRGRSRAEEP-STLAKISSKNLIMGQVKILKRGETLTPDQGVGDGN 120
            RS++  V       R    A  P  TL K  S  + + QV+ILKRGE +  +       
Sbjct: 61  SRSSSPPVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGEEIPKETS----- 120

Query: 121 DSCGKRRLESKGDDVDLV-----LGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFF 180
                          DLV     LGST R+GPDP L+  Q+ L+  K     +       
Sbjct: 121 ---------------DLVVEMSDLGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGPVTM 180

Query: 181 ASPPPSSVPLPSFLGKNGTATSDLRRLLRLDL 204
            SPPPS VPLP+F  K   AT+DL R+LRLD+
Sbjct: 181 TSPPPSDVPLPAFFTKK--ATNDLIRILRLDI 180

BLAST of Bhi06G001581 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-11
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 0

Query: 40  SSTNPNFNHDDTTCSGRRRRSAAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKI 99
           SS N  F H        + R       A R+  +  +  + P+     ++ NL+M QVKI
Sbjct: 8   SSQNHRFEHQTLIHRNPKPRLCRNSSTAPRRRKQSPTVVKSPA-----ANPNLVMEQVKI 67

Query: 100 LKRGETLTPDQGVGDGNDSCGKRRLESKG-DDVDLVLGSTDRLGPDPDLMQKQVVLTEFK 159
           LKRGETL+      +   S   RR   K   DVDL++ +T+R+GP+P+++ KQ+      
Sbjct: 68  LKRGETLSAFNKNKENISSDDTRRPVLKMIKDVDLIVSATNRIGPEPEILMKQIGAL--- 127

Query: 160 VVDGIYAGSGAFFA-SPPPSSVPLPSFLG 187
              G+ + +GA  + SPPPS VP+P FLG
Sbjct: 128 ---GLQSFAGANCSLSPPPSCVPIPCFLG 145

BLAST of Bhi06G001581 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 27/52 (51.92%), Postives = 31/52 (59.62%), Query Frame = 0

Query: 161 DGIYAGSGAFFASPPPSSVPLPSFLGK-----------NGTATSDLRRLLRL 202
           D IYAGS  F  SP PSS+PLPSF  K           + +A+ DLRRLLRL
Sbjct: 83  DDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQDLRRLLRL 134

BLAST of Bhi06G001581 vs. ExPASy TrEMBL
Match: A0A5A7VCB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00850 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 166/206 (80.58%), Postives = 183/206 (88.83%), Query Frame = 0

Query: 1   MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKG RHQGLVLS PL SRRNSNP+S S+S+NPNFNHDD +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGV---GDGND 120
           A+VG+KANRQ NR RSR  E ST AK+++K+L+MGQVKILKRGE LTP +GV   G G D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPS 180
           SCGKRRLESK ++VDLVLGSTDRLGPDPDLMQKQVVLTEFK  DG+YAGSGAFFASPPPS
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 180

Query: 181 SVPLPSFLGKNGTATSDLRRLLRLDL 204
           SVPLPSF+ KNG AT+DLRRLLRLDL
Sbjct: 181 SVPLPSFVVKNGIATTDLRRLLRLDL 204

BLAST of Bhi06G001581 vs. ExPASy TrEMBL
Match: A0A1S3C5D8 (uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 166/206 (80.58%), Postives = 183/206 (88.83%), Query Frame = 0

Query: 1   MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKG RHQGLVLS PL SRRNSNP+S S+S+NPNFNHDD +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGV---GDGND 120
           A+VG+KANRQ NR RSR  E ST AK+++K+L+MGQVKILKRGE LTP +GV   G G D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPS 180
           SCGKRRLESK ++VDLVLGSTDRLGPDPDLMQKQVVLTEFK  DG+YAGSGAFFASPPPS
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 180

Query: 181 SVPLPSFLGKNGTATSDLRRLLRLDL 204
           SVPLPSF+ KNG AT+DLRRLLRLDL
Sbjct: 181 SVPLPSFVVKNGIATTDLRRLLRLDL 204

BLAST of Bhi06G001581 vs. ExPASy TrEMBL
Match: A0A0A0LG41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.5e-83
Identity = 164/204 (80.39%), Postives = 183/204 (89.71%), Query Frame = 0

Query: 1   MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKG RHQGLVLS PL SRRNSNP+STS+S+NPN NHD  +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVG-DGNDSC 120
           A+VG+KANRQ NR RSR  E ST AK+++++L+MGQVKILKRGE LTPD+GVG  G+DSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSV 180
           GKRRLESKG++VDLVLGSTDRLGPD DLMQKQVVLT+FK  DG+YAGSGAFFASPPPSSV
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFLGKNGTATSDLRRLLRLDL 204
           PLPSF  KNG AT+DLRRLLRLDL
Sbjct: 181 PLPSFAVKNGIATTDLRRLLRLDL 202

BLAST of Bhi06G001581 vs. ExPASy TrEMBL
Match: A0A6J1FBP4 (uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC111444161 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.8e-79
Identity = 167/203 (82.27%), Postives = 175/203 (86.21%), Query Frame = 0

Query: 3   TVILPPQDCLGKGFRHQGLVL-SPPLKSRRNSNP-SSTSSSTNPNFNHDDTTCSGRRRRS 62
           TVIL PQDCLG G RHQGLVL SPPLKSRRNSN  SS+SSS NPNFN DD TCSG RRRS
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSG-RRRS 63

Query: 63  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVGDGNDSCG 122
           + VGVKANR+VNRGRSR  E ST AKIS KNL+MGQVKILKRGE L PD GVGDG    G
Sbjct: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----G 123

Query: 123 KRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 182
           KR LESK +D+DLVLGSTDRLGPDPDLMQKQVV +E KV DGIYAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFLGKNGTATSDLRRLLRLDL 204
           LPSFLGKNGTAT+DLRRLLRLDL
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDL 201

BLAST of Bhi06G001581 vs. ExPASy TrEMBL
Match: A0A6J1HQ64 (uncharacterized protein LOC111465671 OS=Cucurbita maxima OX=3661 GN=LOC111465671 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79
Identity = 167/203 (82.27%), Postives = 175/203 (86.21%), Query Frame = 0

Query: 3   TVILPPQDCLGKGFRHQGLVL-SPPLKSRRNSNP-SSTSSSTNPNFNHDDTTCSGRRRRS 62
           TVIL PQDCLG G RHQGLVL SPPLKSRRNSN  SS+SSS NPNFN DD TCSG RRRS
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSG-RRRS 63

Query: 63  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVGDGNDSCG 122
           + VGVKANR+VNRGRSR  E ST AKIS KNL+MGQVKILKRGE L PD GVGDG    G
Sbjct: 64  SEVGVKANRRVNRGRSRVIETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----G 123

Query: 123 KRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 182
           KR LESK +D+DLVLGSTDRLGPDPDLMQKQVV +E KV DGIYAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFLGKNGTATSDLRRLLRLDL 204
           LPSFLGKNGTAT+DLRRLLRLDL
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDL 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G32020.12.1e-1332.55unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02040.17.6e-1134.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G21570.13.6e-0551.92unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VCB71.5e-8380.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C5D81.5e-8380.58uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=... [more]
A0A0A0LG417.5e-8380.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1[more]
A0A6J1FBP43.8e-7982.27uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC1114441... [more]
A0A6J1HQ645.0e-7982.27uncharacterized protein LOC111465671 OS=Cucurbita maxima OX=3661 GN=LOC111465671... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..83
NoneNo IPR availablePANTHERPTHR33670SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKEcoord: 1..203
NoneNo IPR availablePANTHERPTHR33670:SF15OS02G0797600 PROTEINcoord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001581Bhi06M001581mRNA